RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 GMCL1P1Q8NEA9 526 aa8.15□□□□□ -1.1
CDC7-203ENST00000428239 COA7Q96BR5 231 aa8.15□□□□□ -1.1
CDC7-203ENST00000428239 TRIM17Q9Y577 477 aa8.15□□□□□ -1.1
CDC7-203ENST00000428239 GPR25O00155 361 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 TLR2O60603 784 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 FKTNO75072 461 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 STAT3P40763 770 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 AK2P54819 239 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 ZNF543Q08ER8 600 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 SH3D19Q5HYK7 790 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 APOA5Q6Q788 366 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 HEATR3Q7Z4Q2 680 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 ANKRD35Q8N283 1001 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 IGDCC4Q8TDY8 1250 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 RRP36Q96EU6 259 aaKnown RBP8.14□□□□□ -1.11
CDC7-203ENST00000428239 NCOA5Q9HCD5 579 aaKnown RBP8.14□□□□□ -1.11
CDC7-203ENST00000428239 ZSWIM6Q9HCJ5 1215 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 PPP1R9AQ9ULJ8 1098 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 IGKV6D-41A0A0C4DH26 115 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 DDAH1O94760 285 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 MYCNP04198 464 aaPredicted RBP8.14□□□□□ -1.11
CDC7-203ENST00000428239 LIFRP42702 1097 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 PSMC4P43686 418 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 DPP9Q86TI2 863 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 STAG2Q8N3U4 1231 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 DNAJC5GQ8N7S2 189 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 FANCBQ8NB91 859 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 CD99L2Q8TCZ2 262 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 MKL1Q969V6 931 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 SLC26A6Q9BXS9 759 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 PRR12Q9ULL5 1215 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 PTPDC1A2A3K4 754 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 FOXN1O15353 648 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 DTNBO60941 627 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 FCGRTP55899 365 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 COL9A3Q14050 684 aaPredicted RBP8.14□□□□□ -1.11
CDC7-203ENST00000428239 KCTD2Q14681 263 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 GPAT2Q6NUI2 795 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 HSCBQ8IWL3 235 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 NECAB1Q8N987 351 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 GMCL1Q96IK5 515 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 TM6SF1Q9BZW5 370 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 EFCC1Q9HA90 598 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 FOXD4L1Q9NU39 408 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 WBP1LQ9NX94 342 aa8.14□□□□□ -1.11
CDC7-203ENST00000428239 SPDYE16A6NNV3 312 aaPredicted RBP8.13□□□□□ -1.11
CDC7-203ENST00000428239 DSG3P32926 999 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 SEC23AQ15436 765 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 CDC37Q16543 378 aaPredicted RBP8.13□□□□□ -1.11
CDC7-203ENST00000428239 TSGA10IPQ3SY00 556 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 FAM184AQ8NB25 1140 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 SPRYD3Q8NCJ5 442 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 RAET1EQ8TD07 263 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 GTF3C2Q8WUA4 911 aaPredicted RBP8.13□□□□□ -1.11
CDC7-203ENST00000428239 ERO1AQ96HE7 468 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 C12orf42Q96LP6 360 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 TEX13BQ9BXU2 312 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 RABGAP1Q9Y3P9 1069 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 PLIN4Q96Q06 1357 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 MYH8P13535 1937 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 HOXD10P28358 340 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 ADD1P35611 737 aaKnown RBP8.13□□□□□ -1.11
CDC7-203ENST00000428239 ERVK-9P63128 1117 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 ERVK-24P63145 666 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 GNL2Q13823 731 aaKnown RBP8.13□□□□□ -1.11
CDC7-203ENST00000428239 MB21D1Q8N884 522 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 ZNF296Q8WUU4 475 aaPredicted RBP8.13□□□□□ -1.11
CDC7-203ENST00000428239 R3HDMLQ9H3Y0 253 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 RBM28Q9NW13 759 aaKnown RBP8.13□□□□□ -1.11
CDC7-203ENST00000428239 BRPF3Q9ULD4 1205 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 DDX60LQ5H9U9 1706 aaKnown RBP8.13□□□□□ -1.11
CDC7-203ENST00000428239 VWA5AO00534 786 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 PLEKHA8P1O95397 391 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 CYP2B6P20813 491 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 HOXA7P31268 230 aaPredicted RBP8.13□□□□□ -1.11
CDC7-203ENST00000428239 FBXO11Q86XK2 927 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 CCDC83Q8IWF9 413 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 ADGRF4Q8IZF3 695 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 PHKBQ93100 1093 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 AGBL1Q96MI9 1066 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 TBC1D32Q96NH3 1257 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 PIGSQ96S52 555 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 SPATC1LQ9H0A9 340 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 CDK5RAP2Q96SN8 1893 aa8.13□□□□□ -1.11
CDC7-203ENST00000428239 CDKL5O76039 1030 aa8.12□□□□□ -1.11
CDC7-203ENST00000428239 ERCC3P19447 782 aa8.12□□□□□ -1.11
CDC7-203ENST00000428239 CALML3P27482 149 aa8.12□□□□□ -1.11
CDC7-203ENST00000428239 EXOSC10Q01780 885 aaKnown RBP8.12□□□□□ -1.11
CDC7-203ENST00000428239 RNF146Q9NTX7 359 aa8.12□□□□□ -1.11
CDC7-203ENST00000428239 LIMCH1Q9UPQ0 1083 aa8.12□□□□□ -1.11
CDC7-203ENST00000428239 V9GY48 417 aaPredicted RBP8.12□□□□□ -1.11
CDC7-203ENST00000428239 CFBP00751 764 aa8.12□□□□□ -1.11
CDC7-203ENST00000428239 TAL1P17542 331 aaPredicted RBP8.12□□□□□ -1.11
CDC7-203ENST00000428239 SSRP1Q08945 709 aaKnown RBP8.12□□□□□ -1.11
CDC7-203ENST00000428239 TRIM29Q14134 588 aa8.12□□□□□ -1.11
CDC7-203ENST00000428239 GRM4Q14833 912 aa8.12□□□□□ -1.11
CDC7-203ENST00000428239 FAM110CQ1W6H9 321 aa8.12□□□□□ -1.11
CDC7-203ENST00000428239 CUL5Q93034 780 aa8.12□□□□□ -1.11
CDC7-203ENST00000428239 LZTS2Q9BRK4 669 aa8.12□□□□□ -1.11
CDC7-203ENST00000428239 MTA3Q9BTC8 594 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms