RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.79□□□□□ -0.689e-7■■■□□ 17.8
SNX13-203ENST00000428135 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.79□□□□□ -0.68
SNX13-203ENST00000428135 ALKQ9UM73 1620 aa10.79□□□□□ -0.68
SNX13-203ENST00000428135 MYOM2P54296 1465 aa10.79□□□□□ -0.68
SNX13-203ENST00000428135 RRAGAQ7L523 313 aa10.79□□□□□ -0.68
SNX13-203ENST00000428135 FBF1Q8TES7 1133 aa10.79□□□□□ -0.68
SNX13-203ENST00000428135 SLC5A4Q9NY91 659 aa10.79□□□□□ -0.68
SNX13-203ENST00000428135 SPATA31A6Q5VVP1 1343 aa10.79□□□□□ -0.68
SNX13-203ENST00000428135 ADCK5Q3MIX3 580 aa10.79□□□□□ -0.68
SNX13-203ENST00000428135 SPECC1LQ69YQ0 1117 aa10.79□□□□□ -0.68
SNX13-203ENST00000428135 CASC4Q6P4E1 433 aa10.79□□□□□ -0.68
SNX13-203ENST00000428135 KLHL7Q8IXQ5 586 aa10.79□□□□□ -0.68
SNX13-203ENST00000428135 GLT8D2Q9H1C3 349 aa10.79□□□□□ -0.68
SNX13-203ENST00000428135 USP17L2Q6R6M4 530 aa10.79□□□□□ -0.68
SNX13-203ENST00000428135 PLEKHF1Q96S99 279 aa10.79□□□□□ -0.68
SNX13-203ENST00000428135 ATP8A2Q9NTI2 1148 aa10.79□□□□□ -0.68
SNX13-203ENST00000428135 MTUS1Q9ULD2 1270 aa10.79□□□□□ -0.68
SNX13-203ENST00000428135 ODF2LQ9ULJ1 636 aa10.79□□□□□ -0.68
SNX13-203ENST00000428135 AKT3Q9Y243 479 aa10.79□□□□□ -0.68
SNX13-203ENST00000428135 MEIS1O00470 390 aa10.78□□□□□ -0.68
SNX13-203ENST00000428135 MARK3P27448 753 aa10.78□□□□□ -0.68
SNX13-203ENST00000428135 BIRC2Q13490 618 aa10.78□□□□□ -0.68
SNX13-203ENST00000428135 VPS72Q15906 364 aa10.78□□□□□ -0.68
SNX13-203ENST00000428135 LIN9Q5TKA1 542 aa10.78□□□□□ -0.68
SNX13-203ENST00000428135 GTF3C6Q969F1 213 aa10.78□□□□□ -0.68
SNX13-203ENST00000428135 FAM193BQ96PV7 902 aaPredicted RBP10.78□□□□□ -0.68
SNX13-203ENST00000428135 LSM14BQ9BX40 385 aaKnown RBP10.78□□□□□ -0.68
SNX13-203ENST00000428135 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.78□□□□□ -0.68
SNX13-203ENST00000428135 ABCA9Q8IUA7 1624 aa10.78□□□□□ -0.68
SNX13-203ENST00000428135 HEG1Q9ULI3 1381 aa10.78□□□□□ -0.68
SNX13-203ENST00000428135 USP17L3A6NCW0 530 aa10.78□□□□□ -0.68
SNX13-203ENST00000428135 USP17L4A6NCW7 530 aa10.78□□□□□ -0.68
SNX13-203ENST00000428135 SNX16P57768 344 aa10.78□□□□□ -0.68
SNX13-203ENST00000428135 USP17L1Q7RTZ2 530 aa10.78□□□□□ -0.68
SNX13-203ENST00000428135 MARCH10Q8NA82 808 aaPredicted RBP10.78□□□□□ -0.68
SNX13-203ENST00000428135 SLF1Q9BQI6 1058 aa10.78□□□□□ -0.68
SNX13-203ENST00000428135 ABCC4O15439 1325 aa10.78□□□□□ -0.68
SNX13-203ENST00000428135 ADKP55263 362 aaKnown RBP10.78□□□□□ -0.68
SNX13-203ENST00000428135 CALCOCO2Q13137 446 aa10.78□□□□□ -0.68
SNX13-203ENST00000428135 KCTD2Q14681 263 aa10.78□□□□□ -0.68
SNX13-203ENST00000428135 NBPF3Q9H094 633 aa10.78□□□□□ -0.68
SNX13-203ENST00000428135 AOX1Q06278 1338 aa10.78□□□□□ -0.68
SNX13-203ENST00000428135 GAS8O95995 478 aa10.78□□□□□ -0.68
SNX13-203ENST00000428135 SCG2P13521 617 aa10.78□□□□□ -0.68
SNX13-203ENST00000428135 PANK4Q9NVE7 773 aa10.78□□□□□ -0.68
SNX13-203ENST00000428135 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.78□□□□□ -0.68
SNX13-203ENST00000428135 CLIC4Q9Y696 253 aa10.78□□□□□ -0.68
SNX13-203ENST00000428135 IGSF3O75054 1194 aa10.78□□□□□ -0.68
SNX13-203ENST00000428135 PKP1Q13835 747 aa10.78□□□□□ -0.68
SNX13-203ENST00000428135 CIAPIN1Q6FI81 312 aa10.78□□□□□ -0.68
SNX13-203ENST00000428135 PUS7LQ9H0K6 701 aaKnown RBP10.78□□□□□ -0.68
SNX13-203ENST00000428135 ZHX1Q9UKY1 873 aaPredicted RBP10.78□□□□□ -0.68
SNX13-203ENST00000428135 HPDP32754 393 aaPredicted RBP10.77□□□□□ -0.68
SNX13-203ENST00000428135 KLHL30Q0D2K2 578 aa10.77□□□□□ -0.68
SNX13-203ENST00000428135 ADAT2Q7Z6V5 191 aaKnown RBP10.77□□□□□ -0.68
SNX13-203ENST00000428135 HINFPQ9BQA5 517 aa10.77□□□□□ -0.68
SNX13-203ENST00000428135 TET3O43151 1660 aa10.77□□□□□ -0.68
SNX13-203ENST00000428135 SASH1O94885 1247 aa10.77□□□□□ -0.69
SNX13-203ENST00000428135 BMS1Q14692 1282 aaKnown RBP10.77□□□□□ -0.69
SNX13-203ENST00000428135 USP28Q96RU2 1077 aa10.77□□□□□ -0.69
SNX13-203ENST00000428135 NR1I2O75469 434 aa10.77□□□□□ -0.69
SNX13-203ENST00000428135 NLRP12P59046 1061 aa10.77□□□□□ -0.69
SNX13-203ENST00000428135 OSTNP61366 133 aa10.77□□□□□ -0.69
SNX13-203ENST00000428135 MASTLQ96GX5 879 aa10.77□□□□□ -0.69
SNX13-203ENST00000428135 RIOK1Q9BRS2 568 aaKnown RBP10.77□□□□□ -0.69
SNX13-203ENST00000428135 A0A087WWV3 80 aa10.77□□□□□ -0.69
SNX13-203ENST00000428135 CEP104O60308 925 aa10.77□□□□□ -0.69
SNX13-203ENST00000428135 NPR1P16066 1061 aa10.77□□□□□ -0.69
SNX13-203ENST00000428135 PFKFB1P16118 471 aa10.77□□□□□ -0.69
SNX13-203ENST00000428135 HOXA13P31271 388 aaPredicted RBP10.77□□□□□ -0.69
SNX13-203ENST00000428135 ARPP19P56211 112 aa10.77□□□□□ -0.69
SNX13-203ENST00000428135 CCDC6Q16204 474 aa10.77□□□□□ -0.69
SNX13-203ENST00000428135 UBE2SQ16763 222 aa10.77□□□□□ -0.69
SNX13-203ENST00000428135 MICALCLQ6ZW33 695 aa10.77□□□□□ -0.69
SNX13-203ENST00000428135 GJA10Q969M2 543 aa10.77□□□□□ -0.69
SNX13-203ENST00000428135 VPS18Q9P253 973 aa10.77□□□□□ -0.69
SNX13-203ENST00000428135 LEMD3Q9Y2U8 911 aa10.77□□□□□ -0.69
SNX13-203ENST00000428135 CDC42BPGQ6DT37 1551 aa10.77□□□□□ -0.69
SNX13-203ENST00000428135 SLU7O95391 586 aaKnown RBP10.77□□□□□ -0.69
SNX13-203ENST00000428135 CDC25AP30304 524 aa10.77□□□□□ -0.69
SNX13-203ENST00000428135 SCRN1Q12765 414 aa10.77□□□□□ -0.69
SNX13-203ENST00000428135 C4orf50Q6ZRC1 276 aa10.77□□□□□ -0.69
SNX13-203ENST00000428135 NEK8Q86SG6 692 aa10.77□□□□□ -0.69
SNX13-203ENST00000428135 NOSTRINQ8IVI9 506 aa10.77□□□□□ -0.69
SNX13-203ENST00000428135 NOX5Q96PH1 765 aa10.77□□□□□ -0.69
SNX13-203ENST00000428135 TEKT3Q9BXF9 490 aa10.77□□□□□ -0.69
SNX13-203ENST00000428135 RSPH14Q9UHP6 348 aa10.77□□□□□ -0.69
SNX13-203ENST00000428135 PABPC4Q13310 644 aaKnown RBP eCLIP10.76□□□□□ -0.69
SNX13-203ENST00000428135 U2AF1L4Q8WU68 220 aaKnown RBP10.76□□□□□ -0.69
SNX13-203ENST00000428135 ZMYM6O95789 1325 aa10.76□□□□□ -0.69
SNX13-203ENST00000428135 CRCPO75575 148 aa10.76□□□□□ -0.69
SNX13-203ENST00000428135 PTGDRQ13258 359 aa10.76□□□□□ -0.69
SNX13-203ENST00000428135 MYSM1Q5VVJ2 828 aa10.76□□□□□ -0.69
SNX13-203ENST00000428135 PIGSQ96S52 555 aa10.76□□□□□ -0.69
SNX13-203ENST00000428135 SOS2Q07890 1332 aaPredicted RBP10.76□□□□□ -0.69
SNX13-203ENST00000428135 MECOMQ03112 1051 aa10.76□□□□□ -0.69
SNX13-203ENST00000428135 KIAA1024Q9UPX6 916 aa10.76□□□□□ -0.69
SNX13-203ENST00000428135 PALM3A6NDB9 673 aaPredicted RBP10.76□□□□□ -0.69
SNX13-203ENST00000428135 ZBTB8OSQ8IWT0 167 aa10.76□□□□□ -0.69
SNX13-203ENST00000428135 FAM178BQ8IXR5 827 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms