RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 SHISA4Q96DD7 197 aa10.94□□□□□ -0.66
RFX3-AS1-202ENST00000427722 APBA2Q99767 749 aa10.94□□□□□ -0.66
RFX3-AS1-202ENST00000427722 INCENPQ9NQS7 918 aa10.94□□□□□ -0.66
RFX3-AS1-202ENST00000427722 TOMM22Q9NS69 142 aa10.94□□□□□ -0.66
RFX3-AS1-202ENST00000427722 MTMR4Q9NYA4 1195 aa10.94□□□□□ -0.66
RFX3-AS1-202ENST00000427722 HOXC10Q9NYD6 342 aa10.94□□□□□ -0.66
RFX3-AS1-202ENST00000427722 NYAP2Q9P242 653 aa10.94□□□□□ -0.66
RFX3-AS1-202ENST00000427722 CLIP2Q9UDT6 1046 aa10.94□□□□□ -0.66
RFX3-AS1-202ENST00000427722 GJD2Q9UKL4 321 aa10.94□□□□□ -0.66
RFX3-AS1-202ENST00000427722 LHX6Q9UPM6 363 aa10.94□□□□□ -0.66
RFX3-AS1-202ENST00000427722 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.94□□□□□ -0.66
RFX3-AS1-202ENST00000427722 IVNS1ABPQ9Y6Y0 642 aa10.94□□□□□ -0.66
RFX3-AS1-202ENST00000427722 TSPY2A6NKD2 308 aa10.93□□□□□ -0.66
RFX3-AS1-202ENST00000427722 HIP1O00291 1037 aa10.93□□□□□ -0.66
RFX3-AS1-202ENST00000427722 RANBP6O60518 1105 aaKnown RBP10.93□□□□□ -0.66
RFX3-AS1-202ENST00000427722 TTLL1O95922 423 aa10.93□□□□□ -0.66
RFX3-AS1-202ENST00000427722 FGAP02671 866 aa10.93□□□□□ -0.66
RFX3-AS1-202ENST00000427722 HSPD1P10809 573 aaKnown RBP10.93□□□□□ -0.66
RFX3-AS1-202ENST00000427722 ZKSCAN1P17029 563 aaPredicted RBP10.93□□□□□ -0.66
RFX3-AS1-202ENST00000427722 RGS2P41220 211 aa10.93□□□□□ -0.66
RFX3-AS1-202ENST00000427722 MFAP1P55081 439 aaKnown RBP10.93□□□□□ -0.66
RFX3-AS1-202ENST00000427722 HAND2P61296 217 aa10.93□□□□□ -0.66
RFX3-AS1-202ENST00000427722 ALX1Q15699 326 aa10.93□□□□□ -0.66
RFX3-AS1-202ENST00000427722 RRP12Q5JTH9 1297 aaKnown RBP10.93□□□□□ -0.66
RFX3-AS1-202ENST00000427722 PPP1R15BQ5SWA1 713 aa10.93□□□□□ -0.66
RFX3-AS1-202ENST00000427722 MORN1Q5T089 497 aa10.93□□□□□ -0.66
RFX3-AS1-202ENST00000427722 MB21D1Q8N884 522 aa10.93□□□□□ -0.66
RFX3-AS1-202ENST00000427722 NEDD1Q8NHV4 660 aa10.93□□□□□ -0.66
RFX3-AS1-202ENST00000427722 TRIB2Q92519 343 aa10.93□□□□□ -0.66
RFX3-AS1-202ENST00000427722 LARP6Q9BRS8 491 aaKnown RBP10.93□□□□□ -0.66
RFX3-AS1-202ENST00000427722 MOV10L1Q9BXT6 1211 aaKnown RBP10.93□□□□□ -0.66
RFX3-AS1-202ENST00000427722 SPATC1LQ9H0A9 340 aa10.93□□□□□ -0.66
RFX3-AS1-202ENST00000427722 ISY1Q9ULR0 285 aaKnown RBP10.93□□□□□ -0.66
RFX3-AS1-202ENST00000427722 ZMYM6O95789 1325 aa10.92□□□□□ -0.66
RFX3-AS1-202ENST00000427722 F5H6K3 240 aa10.92□□□□□ -0.66
RFX3-AS1-202ENST00000427722 GJB1P08034 283 aa10.92□□□□□ -0.66
RFX3-AS1-202ENST00000427722 ERCC3P19447 782 aa10.92□□□□□ -0.66
RFX3-AS1-202ENST00000427722 KLRC3Q07444 240 aa10.92□□□□□ -0.66
RFX3-AS1-202ENST00000427722 TRIM32Q13049 653 aa10.92□□□□□ -0.66
RFX3-AS1-202ENST00000427722 NCAPG2Q86XI2 1143 aa10.92□□□□□ -0.66
RFX3-AS1-202ENST00000427722 TBC1D10CQ8IV04 446 aa10.92□□□□□ -0.66
RFX3-AS1-202ENST00000427722 U2AF1L4Q8WU68 220 aaKnown RBP10.92□□□□□ -0.66
RFX3-AS1-202ENST00000427722 DEFB118Q96PH6 123 aa10.92□□□□□ -0.66
RFX3-AS1-202ENST00000427722 SLF1Q9BQI6 1058 aa10.92□□□□□ -0.66
RFX3-AS1-202ENST00000427722 ANAPC4Q9UJX5 808 aa10.92□□□□□ -0.66
RFX3-AS1-202ENST00000427722 PPP1R9AQ9ULJ8 1098 aa10.92□□□□□ -0.66
RFX3-AS1-202ENST00000427722 STX8Q9UNK0 236 aa10.92□□□□□ -0.66
RFX3-AS1-202ENST00000427722 TACC3Q9Y6A5 838 aa10.92□□□□□ -0.66
RFX3-AS1-202ENST00000427722 ORC4O43929 436 aa10.91□□□□□ -0.66
RFX3-AS1-202ENST00000427722 NMT2O60551 498 aa10.91□□□□□ -0.66
RFX3-AS1-202ENST00000427722 PTPREP23469 700 aa10.91□□□□□ -0.66
RFX3-AS1-202ENST00000427722 GJA8P48165 433 aa10.91□□□□□ -0.66
RFX3-AS1-202ENST00000427722 MAP2K5Q13163 448 aa10.91□□□□□ -0.66
RFX3-AS1-202ENST00000427722 MMRN1Q13201 1228 aa10.91□□□□□ -0.66
RFX3-AS1-202ENST00000427722 GRB14Q14449 540 aa10.91□□□□□ -0.66
RFX3-AS1-202ENST00000427722 TMEM132BQ14DG7 1078 aa10.91□□□□□ -0.66
RFX3-AS1-202ENST00000427722 CCL14Q16627 93 aa10.91□□□□□ -0.66
RFX3-AS1-202ENST00000427722 GMCL1P1Q8NEA9 526 aa10.91□□□□□ -0.66
RFX3-AS1-202ENST00000427722 NKX2-3Q8TAU0 364 aa10.91□□□□□ -0.66
RFX3-AS1-202ENST00000427722 USP6NLQ92738 828 aa10.91□□□□□ -0.66
RFX3-AS1-202ENST00000427722 CHMP4CQ96CF2 233 aa10.91□□□□□ -0.66
RFX3-AS1-202ENST00000427722 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.91□□□□□ -0.66
RFX3-AS1-202ENST00000427722 SYNPO2Q9UMS6 1093 aa10.91□□□□□ -0.66
RFX3-AS1-202ENST00000427722 CENPFP49454 3210 aa10.9□□□□□ -0.66
RFX3-AS1-202ENST00000427722 SLC15A5A6NIM6 579 aa10.9□□□□□ -0.66
RFX3-AS1-202ENST00000427722 VWA5AO00534 786 aa10.9□□□□□ -0.66
RFX3-AS1-202ENST00000427722 XRCC5P13010 732 aaKnown RBP10.9□□□□□ -0.66
RFX3-AS1-202ENST00000427722 ADORA2AP29274 412 aa10.9□□□□□ -0.66
RFX3-AS1-202ENST00000427722 PPP4R3BQ5MIZ7 849 aa10.9□□□□□ -0.66
RFX3-AS1-202ENST00000427722 SLFN13Q68D06 897 aa10.9□□□□□ -0.66
RFX3-AS1-202ENST00000427722 RASGRP2Q7LDG7 609 aa10.9□□□□□ -0.66
RFX3-AS1-202ENST00000427722 TRMT44Q8IYL2 757 aaKnown RBP10.9□□□□□ -0.66
RFX3-AS1-202ENST00000427722 SHCBP1Q8NEM2 672 aa10.9□□□□□ -0.66
RFX3-AS1-202ENST00000427722 NBPF3Q9H094 633 aa10.9□□□□□ -0.66
RFX3-AS1-202ENST00000427722 IL25Q9H293 177 aa10.9□□□□□ -0.66
RFX3-AS1-202ENST00000427722 PAK6Q9NQU5 681 aaPredicted RBP10.9□□□□□ -0.66
RFX3-AS1-202ENST00000427722 IL17RBQ9NRM6 502 aa10.9□□□□□ -0.66
RFX3-AS1-202ENST00000427722 MTMR7Q9Y216 660 aa10.9□□□□□ -0.66
RFX3-AS1-202ENST00000427722 KIAA0100Q14667 2235 aaKnown RBP10.9□□□□□ -0.66
RFX3-AS1-202ENST00000427722 NEDD4P46934 1319 aa10.89□□□□□ -0.67
RFX3-AS1-202ENST00000427722 FARP2O94887 1054 aaPredicted RBP10.89□□□□□ -0.67
RFX3-AS1-202ENST00000427722 FGRP09769 529 aa10.89□□□□□ -0.67
RFX3-AS1-202ENST00000427722 AKNAD1Q5T1N1 836 aa10.89□□□□□ -0.67
RFX3-AS1-202ENST00000427722 MAP3K21Q5TCX8 1036 aa10.89□□□□□ -0.67
RFX3-AS1-202ENST00000427722 MFSD6Q6ZSS7 791 aa10.89□□□□□ -0.67
RFX3-AS1-202ENST00000427722 REPS2Q8NFH8 660 aa10.89□□□□□ -0.67
RFX3-AS1-202ENST00000427722 NPLOC4Q8TAT6 608 aa10.89□□□□□ -0.67
RFX3-AS1-202ENST00000427722 OXER1Q8TDS5 423 aa10.89□□□□□ -0.67
RFX3-AS1-202ENST00000427722 STAG1Q8WVM7 1258 aa10.89□□□□□ -0.67
RFX3-AS1-202ENST00000427722 MKL1Q969V6 931 aa10.89□□□□□ -0.67
RFX3-AS1-202ENST00000427722 KIFC2Q96AC6 838 aa10.89□□□□□ -0.67
RFX3-AS1-202ENST00000427722 RNF41Q9H4P4 317 aaPredicted RBP10.89□□□□□ -0.67
RFX3-AS1-202ENST00000427722 MROH8Q9H579 483 aa10.89□□□□□ -0.67
RFX3-AS1-202ENST00000427722 HMX1Q9NP08 348 aaPredicted RBP10.89□□□□□ -0.67
RFX3-AS1-202ENST00000427722 ZNF214Q9UL59 606 aaPredicted RBP10.89□□□□□ -0.67
RFX3-AS1-202ENST00000427722 ADAMTS5Q9UNA0 930 aa10.89□□□□□ -0.67
RFX3-AS1-202ENST00000427722 CTDP1Q9Y5B0 961 aaPredicted RBP10.89□□□□□ -0.67
RFX3-AS1-202ENST00000427722 RPTORQ8N122 1335 aa10.88□□□□□ -0.67
RFX3-AS1-202ENST00000427722 RAD50Q92878 1312 aa10.88□□□□□ -0.67
RFX3-AS1-202ENST00000427722 GREB1LQ9C091 1923 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms