RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 POMGNT1Q8WZA1 660 aa14.54□□□□□ -0.08
SPG11-202ENST00000427534 NAP1L4Q99733 375 aaKnown RBP14.54□□□□□ -0.08
SPG11-202ENST00000427534 LOC102724428A0A0B4J2F2 783 aa14.54□□□□□ -0.08
SPG11-202ENST00000427534 MYL3P08590 195 aa14.54□□□□□ -0.08
SPG11-202ENST00000427534 LTKP29376 864 aa14.54□□□□□ -0.08
SPG11-202ENST00000427534 SIK1P57059 783 aa14.54□□□□□ -0.08
SPG11-202ENST00000427534 RMDN2Q96LZ7 410 aa14.54□□□□□ -0.08
SPG11-202ENST00000427534 KIAA0232Q92628 1395 aa14.54□□□□□ -0.08
SPG11-202ENST00000427534 RILPL1Q5EBL4 403 aa14.54□□□□□ -0.08
SPG11-202ENST00000427534 KBTBD3Q8NAB2 608 aa14.54□□□□□ -0.08
SPG11-202ENST00000427534 CHAMP1Q96JM3 812 aa14.54□□□□□ -0.08
SPG11-202ENST00000427534 PANK4Q9NVE7 773 aa14.54□□□□□ -0.08
SPG11-202ENST00000427534 SERPINB2P05120 415 aa14.53□□□□□ -0.08
SPG11-202ENST00000427534 KLHL30Q0D2K2 578 aa14.53□□□□□ -0.08
SPG11-202ENST00000427534 SLC12A1Q13621 1099 aa14.53□□□□□ -0.08
SPG11-202ENST00000427534 GNPTABQ3T906 1256 aa14.53□□□□□ -0.08
SPG11-202ENST00000427534 HS1BP3Q53T59 392 aa14.53□□□□□ -0.08
SPG11-202ENST00000427534 KRT27Q7Z3Y8 459 aa14.53□□□□□ -0.08
SPG11-202ENST00000427534 TRIM50Q86XT4 487 aa14.53□□□□□ -0.08
SPG11-202ENST00000427534 NLRP7Q8WX94 980 aa14.53□□□□□ -0.08
SPG11-202ENST00000427534 HOOK2Q96ED9 719 aa14.53□□□□□ -0.08
SPG11-202ENST00000427534 CYP2D7A0A087X1C5 515 aa14.53□□□□□ -0.08
SPG11-202ENST00000427534 TTBK2Q6IQ55 1244 aa14.53□□□□□ -0.08
SPG11-202ENST00000427534 GANCQ8TET4 914 aa14.53□□□□□ -0.08
SPG11-202ENST00000427534 LLPHQ9BRT6 129 aaKnown RBP14.53□□□□□ -0.08
SPG11-202ENST00000427534 TMOD1P28289 359 aa14.53□□□□□ -0.08
SPG11-202ENST00000427534 SCYL1Q96KG9 808 aa14.53□□□□□ -0.08
SPG11-202ENST00000427534 TSGA10Q9BZW7 698 aa14.53□□□□□ -0.08
SPG11-202ENST00000427534 GUCY2FP51841 1108 aa14.53□□□□□ -0.08
SPG11-202ENST00000427534 PTH1RQ03431 593 aa14.53□□□□□ -0.08
SPG11-202ENST00000427534 POSTNQ15063 836 aa14.53□□□□□ -0.08
SPG11-202ENST00000427534 ZNF654Q8IZM8 581 aa14.53□□□□□ -0.08
SPG11-202ENST00000427534 UBL4BQ8N7F7 174 aa14.53□□□□□ -0.08
SPG11-202ENST00000427534 PI4K2BQ8TCG2 481 aa14.53□□□□□ -0.08
SPG11-202ENST00000427534 A0A0D9SFI3 127 aa14.53□□□□□ -0.08
SPG11-202ENST00000427534 FMNL1O95466 1100 aaPredicted RBP14.53□□□□□ -0.08
SPG11-202ENST00000427534 PHKG2P15735 406 aa14.53□□□□□ -0.08
SPG11-202ENST00000427534 GNL1P36915 607 aaPredicted RBP14.53□□□□□ -0.08
SPG11-202ENST00000427534 CASP2P42575 452 aa14.53□□□□□ -0.08
SPG11-202ENST00000427534 NAA35Q5VZE5 725 aa14.53□□□□□ -0.08
SPG11-202ENST00000427534 IFNL3Q8IZI9 196 aa14.53□□□□□ -0.08
SPG11-202ENST00000427534 SLFN13Q68D06 897 aa14.52□□□□□ -0.08
SPG11-202ENST00000427534 KRT25Q7Z3Z0 450 aa14.52□□□□□ -0.08
SPG11-202ENST00000427534 STAM2O75886 525 aa14.52□□□□□ -0.08
SPG11-202ENST00000427534 FANCCQ00597 558 aa14.52□□□□□ -0.08
SPG11-202ENST00000427534 SCAF8Q9UPN6 1271 aaKnown RBP14.52□□□□□ -0.08
SPG11-202ENST00000427534 TACC3Q9Y6A5 838 aa14.52□□□□□ -0.08
SPG11-202ENST00000427534 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.52□□□□□ -0.08
SPG11-202ENST00000427534 ADD1P35611 737 aaKnown RBP14.52□□□□□ -0.08
SPG11-202ENST00000427534 ADCY1Q08828 1119 aa14.52□□□□□ -0.08
SPG11-202ENST00000427534 TNFAIP1Q13829 316 aa14.52□□□□□ -0.08
SPG11-202ENST00000427534 CHURC1Q8WUH1 139 aa14.52□□□□□ -0.08
SPG11-202ENST00000427534 RSAD2Q8WXG1 361 aa14.52□□□□□ -0.08
SPG11-202ENST00000427534 TLR7Q9NYK1 1049 aaKnown RBP14.52□□□□□ -0.08
SPG11-202ENST00000427534 STIM2Q9P246 746 aa14.52□□□□□ -0.08
SPG11-202ENST00000427534 KLRF2D3W0D1 207 aa14.52□□□□□ -0.09
SPG11-202ENST00000427534 C8orf74Q6P047 294 aa14.52□□□□□ -0.09
SPG11-202ENST00000427534 DYNLL2Q96FJ2 89 aa14.52□□□□□ -0.09
SPG11-202ENST00000427534 ZBED2Q9BTP6 218 aa14.52□□□□□ -0.09
SPG11-202ENST00000427534 STMN4Q9H169 189 aaPredicted RBP14.52□□□□□ -0.09
SPG11-202ENST00000427534 PI16Q6UXB8 463 aa14.52□□□□□ -0.09
SPG11-202ENST00000427534 CCDC26Q8TAB7 109 aa14.52□□□□□ -0.09
SPG11-202ENST00000427534 ALKBH8Q96BT7 664 aaKnown RBP14.52□□□□□ -0.09
SPG11-202ENST00000427534 VAV2P52735 878 aa14.52□□□□□ -0.09
SPG11-202ENST00000427534 GOLGA8FQ08AF8 430 aa14.52□□□□□ -0.09
SPG11-202ENST00000427534 GOLGA8DPQ0D2H9 430 aa14.52□□□□□ -0.09
SPG11-202ENST00000427534 INTS8Q75QN2 995 aaKnown RBP14.52□□□□□ -0.09
SPG11-202ENST00000427534 HACE1Q8IYU2 909 aa14.52□□□□□ -0.09
SPG11-202ENST00000427534 PPM1KQ8N3J5 372 aa14.52□□□□□ -0.09
SPG11-202ENST00000427534 C7orf31Q8N865 590 aa14.52□□□□□ -0.09
SPG11-202ENST00000427534 FTOQ9C0B1 505 aaKnown RBP eCLIP14.52□□□□□ -0.09
SPG11-202ENST00000427534 NUB1Q9Y5A7 615 aa14.52□□□□□ -0.09
SPG11-202ENST00000427534 ZNF804BA4D1E1 1349 aa14.52□□□□□ -0.09
SPG11-202ENST00000427534 TMEM2Q9UHN6 1383 aa14.52□□□□□ -0.09
SPG11-202ENST00000427534 SCARA5Q6ZMJ2 495 aa14.51□□□□□ -0.09
SPG11-202ENST00000427534 NKIRAS1Q9NYS0 192 aa14.51□□□□□ -0.09
SPG11-202ENST00000427534 PTPN22Q9Y2R2 807 aa14.51□□□□□ -0.09
SPG11-202ENST00000427534 FIS1Q9Y3D6 152 aa14.51□□□□□ -0.09
SPG11-202ENST00000427534 KIF24Q5T7B8 1368 aa14.51□□□□□ -0.09
SPG11-202ENST00000427534 TNNC2P02585 160 aa14.51□□□□□ -0.09
SPG11-202ENST00000427534 KCTD2Q14681 263 aa14.51□□□□□ -0.09
SPG11-202ENST00000427534 ZBTB8OSQ8IWT0 167 aa14.51□□□□□ -0.09
SPG11-202ENST00000427534 PNMA1Q8ND90 353 aa14.51□□□□□ -0.09
SPG11-202ENST00000427534 GJA10Q969M2 543 aa14.51□□□□□ -0.09
SPG11-202ENST00000427534 MOSPD1Q9UJG1 213 aa14.51□□□□□ -0.09
SPG11-202ENST00000427534 GPR161Q8N6U8 529 aaKnown RBP14.51□□□□□ -0.09
SPG11-202ENST00000427534 SAMD15Q9P1V8 674 aa14.51□□□□□ -0.09
SPG11-202ENST00000427534 INPP5FQ9Y2H2 1132 aa14.51□□□□□ -0.09
SPG11-202ENST00000427534 ZBTB1Q9Y2K1 713 aa14.51□□□□□ -0.09
SPG11-202ENST00000427534 HOXA13P31271 388 aaPredicted RBP14.51□□□□□ -0.09
SPG11-202ENST00000427534 KIAA1841Q6NSI8 718 aa14.51□□□□□ -0.09
SPG11-202ENST00000427534 AP5M1Q9H0R1 490 aa14.51□□□□□ -0.09
SPG11-202ENST00000427534 PCDHA12Q9UN75 941 aa14.51□□□□□ -0.09
SPG11-202ENST00000427534 RNF123Q5XPI4 1314 aa14.51□□□□□ -0.09
SPG11-202ENST00000427534 CLGNO14967 610 aa14.51□□□□□ -0.09
SPG11-202ENST00000427534 MYLK4Q86YV6 388 aaPredicted RBP14.51□□□□□ -0.09
SPG11-202ENST00000427534 TRPC5Q9UL62 973 aaPredicted RBP14.51□□□□□ -0.09
SPG11-202ENST00000427534 FAM196BA6NMK8 535 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 SLC12A2P55011 1212 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 IL1RL1Q01638 556 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms