RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 CCNG1P51959 295 aa6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 SESN3P58005 492 aa6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 INHBEP58166 350 aa6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 MAP3K12Q12852 859 aa6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 MAP7Q14244 749 aa6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 ITIH4Q14624 930 aa6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 KCNB1Q14721 858 aa6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 DPCR1Q3MIW9 517 aa6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 ANKRD20A8PQ5CZ79 823 aa6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 CREB3L3Q68CJ9 461 aa6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 CCNI2Q6ZMN8 369 aaPredicted RBP6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 CLASRPQ8N2M8 674 aaKnown RBP6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 MMGT1Q8N4V1 131 aa6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 CCDC63Q8NA47 563 aa6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 MYCBPAPQ8TBZ2 947 aa6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 ENOX1Q8TC92 643 aaKnown RBP6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 AENQ8WTP8 325 aaKnown RBP6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 HDAC7Q8WUI4 952 aa6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 SNRNP27Q8WVK2 155 aaKnown RBP6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 LRRC45Q96CN5 670 aa6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 THOC1Q96FV9 657 aaKnown RBP6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 RBM41Q96IZ5 413 aaKnown RBP6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 CCT8L2Q96SF2 557 aa6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 IWS1Q96ST2 819 aa6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 LZTS2Q9BRK4 669 aa6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 PRKD2Q9BZL6 878 aa6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 NOD2Q9HC29 1040 aa6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 LZTFL1Q9NQ48 299 aa6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 PAIP2BQ9ULR5 123 aaKnown RBP6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 TPX2Q9ULW0 747 aaKnown RBP6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 CEP131Q9UPN4 1083 aa6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 SLC4A7Q9Y6M7 1214 aa6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 ADGRB3O60242 1522 aa6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 ARAP3Q8WWN8 1544 aa6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 WDR17Q8IZU2 1322 aa6.24□□□□□ -1.41
VTI1BP4-201ENST00000427516 CLTCQ00610 1675 aaKnown RBP6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 PREX1Q8TCU6 1659 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 ADCY9O60503 1353 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 E7EVH7 732 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 GCOM1H8Y6P7 765 aaPredicted RBP6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 IFIT3O14879 490 aaKnown RBP6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 SPTLC2O15270 562 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 ZSCAN9O15535 394 aaPredicted RBP6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 USO1O60763 962 aaKnown RBP6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 HIP1RO75146 1068 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 PPP6R2O75170 966 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 CFHP08603 1231 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 MYZAPP0CAP1 466 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 UBTFL1P0CB47 393 aaPredicted RBP6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 CCDC166P0CW27 439 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 ATP2A2P16615 1042 aaKnown RBP6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 TPP2P29144 1249 aaPredicted RBP6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 PDE6BP35913 854 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 SYKP43405 635 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 RANBP1P43487 201 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 MYO1EQ12965 1108 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 IFT88Q13099 833 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 NCAPHQ15003 741 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 KARSQ15046 597 aaKnown RBP6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 NECTIN1Q15223 517 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 TAF7Q15545 349 aaPredicted RBP6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 TBC1D25Q3MII6 688 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 NUTM2GQ5VZR2 741 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 PAPD7Q5XG87 772 aaKnown RBP6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 CCDC102BQ68D86 513 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 TRAPPC11Q7Z392 1133 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 ZNF572Q7Z3I7 529 aaPredicted RBP6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 MAATS1Q7Z4T9 603 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 TRIM42Q8IWZ5 723 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 TC2NQ8N9U0 490 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 MAP4K1Q92918 833 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 OPTNQ96CV9 577 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 CYFIP2Q96F07 1278 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 ATP6V1G3Q96LB4 118 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 CLIC6Q96NY7 704 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 TCHPQ9BT92 498 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 BHMT2Q9H2M3 363 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 RANBP17Q9H2T7 1088 aaKnown RBP6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 ZSWIM4Q9H7M6 989 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 NRDE2Q9H7Z3 1164 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 SLC39A2Q9NP94 309 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 DMAP1Q9NPF5 467 aaPredicted RBP6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 ECHDC1Q9NTX5 307 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 UTP6Q9NYH9 597 aaKnown RBP6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 SAMD15Q9P1V8 674 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 BLOC1S6Q9UL45 172 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 RPL26L1Q9UNX3 145 aaKnown RBP6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 PCDHGC5Q9Y5F6 944 aa6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 NPHP4O75161 1426 aaPredicted RBP6.23□□□□□ -1.41
VTI1BP4-201ENST00000427516 C5orf60A6NFR6 353 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 ARID3CA6NKF2 412 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 BIN1O00499 593 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 PPP1R12BO60237 982 aaPredicted RBP6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 MFAP3LO75121 409 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 ATP5HO75947 161 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 ZNF202O95125 648 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 ANP32DO95626 131 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 BAG3O95817 575 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 MAP4K4O95819 1239 aaPredicted RBP6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 RPSAP08865 295 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms