RNA–Protein interactions for RNA: ENST00000427419.5

SLC40A1-204, Transcript of solute carrier family 40 member 1, humanhuman

TSL 1 (best)

Gene SLC40A1, Length 299 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC40A1-204ENST00000427419 CCDC178Q5BJE1 867 aa11.89□□□□□ -0.51
SLC40A1-204ENST00000427419 RCSD1Q6JBY9 416 aa11.89□□□□□ -0.51
SLC40A1-204ENST00000427419 MFSD6Q6ZSS7 791 aa11.89□□□□□ -0.51
SLC40A1-204ENST00000427419 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.89□□□□□ -0.51
SLC40A1-204ENST00000427419 LRRC47Q8N1G4 583 aaKnown RBP11.89□□□□□ -0.51
SLC40A1-204ENST00000427419 REPS2Q8NFH8 660 aa11.89□□□□□ -0.51
SLC40A1-204ENST00000427419 NPLOC4Q8TAT6 608 aa11.89□□□□□ -0.51
SLC40A1-204ENST00000427419 PAWRQ96IZ0 340 aaKnown RBP11.89□□□□□ -0.51
SLC40A1-204ENST00000427419 C11orf49Q9H6J7 331 aa11.89□□□□□ -0.51
SLC40A1-204ENST00000427419 SLC38A10Q9HBR0 1119 aa11.89□□□□□ -0.51
SLC40A1-204ENST00000427419 TOMM22Q9NS69 142 aa11.89□□□□□ -0.51
SLC40A1-204ENST00000427419 DDX20Q9UHI6 824 aaKnown RBP11.89□□□□□ -0.51
SLC40A1-204ENST00000427419 CTNNA3Q9UI47 895 aa11.89□□□□□ -0.51
SLC40A1-204ENST00000427419 PNMA2Q9UL42 364 aa11.89□□□□□ -0.51
SLC40A1-204ENST00000427419 RAD50Q92878 1312 aa11.88□□□□□ -0.51
SLC40A1-204ENST00000427419 ZNF213O14771 459 aa11.88□□□□□ -0.51
SLC40A1-204ENST00000427419 IGHA2P01877 340 aa11.88□□□□□ -0.51
SLC40A1-204ENST00000427419 CCND3P30281 292 aaPredicted RBP11.88□□□□□ -0.51
SLC40A1-204ENST00000427419 NOVP48745 357 aa11.88□□□□□ -0.51
SLC40A1-204ENST00000427419 TKFCQ3LXA3 575 aa11.88□□□□□ -0.51
SLC40A1-204ENST00000427419 AKNAD1Q5T1N1 836 aa11.88□□□□□ -0.51
SLC40A1-204ENST00000427419 SNRNP48Q6IEG0 339 aaKnown RBP11.88□□□□□ -0.51
SLC40A1-204ENST00000427419 CWC27Q6UX04 472 aaKnown RBP11.88□□□□□ -0.51
SLC40A1-204ENST00000427419 ZNF589Q86UQ0 364 aaPredicted RBP11.88□□□□□ -0.51
SLC40A1-204ENST00000427419 CHST13Q8NET6 341 aa11.88□□□□□ -0.51
SLC40A1-204ENST00000427419 DCAF4Q8WV16 495 aa11.88□□□□□ -0.51
SLC40A1-204ENST00000427419 STAG1Q8WVM7 1258 aa11.88□□□□□ -0.51
SLC40A1-204ENST00000427419 RUFY2Q8WXA3 655 aa11.88□□□□□ -0.51
SLC40A1-204ENST00000427419 ESR2Q92731 530 aa11.88□□□□□ -0.51
SLC40A1-204ENST00000427419 KIFC2Q96AC6 838 aa11.88□□□□□ -0.51
SLC40A1-204ENST00000427419 MAML3Q96JK9 1138 aa11.88□□□□□ -0.51
SLC40A1-204ENST00000427419 TTC14Q96N46 770 aa11.88□□□□□ -0.51
SLC40A1-204ENST00000427419 NUP88Q99567 741 aaPredicted RBP11.88□□□□□ -0.51
SLC40A1-204ENST00000427419 DSCC1Q9BVC3 393 aa11.88□□□□□ -0.51
SLC40A1-204ENST00000427419 FLRT1Q9NZU1 646 aa11.88□□□□□ -0.51
SLC40A1-204ENST00000427419 PLXNA1Q9UIW2 1896 aa11.87□□□□□ -0.51
SLC40A1-204ENST00000427419 MKI67P46013 3256 aaKnown RBP11.87□□□□□ -0.51
SLC40A1-204ENST00000427419 TMEM232C9JQI7 657 aa11.87□□□□□ -0.51
SLC40A1-204ENST00000427419 SEPT4O43236 478 aa11.87□□□□□ -0.51
SLC40A1-204ENST00000427419 COBLO75128 1261 aa11.87□□□□□ -0.51
SLC40A1-204ENST00000427419 TOP1P11387 765 aaKnown RBP11.87□□□□□ -0.51
SLC40A1-204ENST00000427419 CYBAP13498 195 aa11.87□□□□□ -0.51
SLC40A1-204ENST00000427419 CNGA1P29973 690 aa11.87□□□□□ -0.51
SLC40A1-204ENST00000427419 IKQ13123 557 aaPredicted RBP11.87□□□□□ -0.51
SLC40A1-204ENST00000427419 RRP12Q5JTH9 1297 aaKnown RBP11.87□□□□□ -0.51
SLC40A1-204ENST00000427419 TTC22Q5TAA0 569 aa11.87□□□□□ -0.51
SLC40A1-204ENST00000427419 LHX8Q68G74 356 aa11.87□□□□□ -0.51
SLC40A1-204ENST00000427419 ARRDC4Q8NCT1 418 aa11.87□□□□□ -0.51
SLC40A1-204ENST00000427419 DDX11Q96FC9 970 aa11.87□□□□□ -0.51
SLC40A1-204ENST00000427419 IL17RBQ9NRM6 502 aa11.87□□□□□ -0.51
SLC40A1-204ENST00000427419 ISY1Q9ULR0 285 aaKnown RBP11.87□□□□□ -0.51
SLC40A1-204ENST00000427419 LAMA4Q16363 1823 aa11.87□□□□□ -0.51
SLC40A1-204ENST00000427419 FRMPD3Q5JV73 1810 aa11.87□□□□□ -0.51
SLC40A1-204ENST00000427419 H0YGN5 161 aa11.86□□□□□ -0.51
SLC40A1-204ENST00000427419 DNM1LO00429 736 aa11.86□□□□□ -0.51
SLC40A1-204ENST00000427419 CYP2C19P33261 490 aa11.86□□□□□ -0.51
SLC40A1-204ENST00000427419 IMMTQ16891 758 aaKnown RBP11.86□□□□□ -0.51
SLC40A1-204ENST00000427419 ZNF792Q3KQV3 632 aa11.86□□□□□ -0.51
SLC40A1-204ENST00000427419 ZNF467Q7Z7K2 595 aaPredicted RBP11.86□□□□□ -0.51
SLC40A1-204ENST00000427419 IQCA1Q86XH1 822 aa11.86□□□□□ -0.51
SLC40A1-204ENST00000427419 CPXCR1Q8N123 301 aa11.86□□□□□ -0.51
SLC40A1-204ENST00000427419 TINF2Q9BSI4 451 aa11.86□□□□□ -0.51
SLC40A1-204ENST00000427419 CNPY2Q9Y2B0 182 aa11.86□□□□□ -0.51
SLC40A1-204ENST00000427419 SYNGAP1Q96PV0 1343 aa11.86□□□□□ -0.51
SLC40A1-204ENST00000427419 MCCP23508 829 aa11.85□□□□□ -0.51
SLC40A1-204ENST00000427419 ANKRD35Q8N283 1001 aa11.85□□□□□ -0.51
SLC40A1-204ENST00000427419 ACAD9Q9H845 621 aa11.85□□□□□ -0.51
SLC40A1-204ENST00000427419 CNNM2Q9H8M5 875 aa11.85□□□□□ -0.51
SLC40A1-204ENST00000427419 DNAJC25-GNG10A0A024R161 153 aa11.84□□□□□ -0.51
SLC40A1-204ENST00000427419 A0A1W2PPC1 479 aa11.84□□□□□ -0.51
SLC40A1-204ENST00000427419 COL6A1P12109 1028 aa11.84□□□□□ -0.51
SLC40A1-204ENST00000427419 MNX1P50219 401 aaPredicted RBP11.84□□□□□ -0.51
SLC40A1-204ENST00000427419 HAND2P61296 217 aa11.84□□□□□ -0.51
SLC40A1-204ENST00000427419 CCDC96Q2M329 555 aa11.84□□□□□ -0.51
SLC40A1-204ENST00000427419 HABP4Q5JVS0 413 aaKnown RBP11.84□□□□□ -0.51
SLC40A1-204ENST00000427419 MAMDC4Q6UXC1 1216 aa11.84□□□□□ -0.51
SLC40A1-204ENST00000427419 BTNL9Q6UXG8 535 aa11.84□□□□□ -0.51
SLC40A1-204ENST00000427419 DGKHQ86XP1 1220 aa11.84□□□□□ -0.51
SLC40A1-204ENST00000427419 DIS3LQ8TF46 1054 aaKnown RBP11.84□□□□□ -0.51
SLC40A1-204ENST00000427419 KRT23Q9C075 422 aa11.84□□□□□ -0.51
SLC40A1-204ENST00000427419 RAVER2Q9HCJ3 691 aaKnown RBP11.84□□□□□ -0.51
SLC40A1-204ENST00000427419 PFASO15067 1338 aa11.84□□□□□ -0.51
SLC40A1-204ENST00000427419 KBTBD13C9JR72 458 aa11.83□□□□□ -0.52
SLC40A1-204ENST00000427419 NMT2O60551 498 aa11.83□□□□□ -0.52
SLC40A1-204ENST00000427419 PGK2P07205 417 aa11.83□□□□□ -0.52
SLC40A1-204ENST00000427419 RARBP10826 455 aa11.83□□□□□ -0.52
SLC40A1-204ENST00000427419 AKR1A1P14550 325 aa11.83□□□□□ -0.52
SLC40A1-204ENST00000427419 GPATCH4Q5T3I0 446 aaKnown RBP11.83□□□□□ -0.52
SLC40A1-204ENST00000427419 KCTD1Q719H9 257 aa11.83□□□□□ -0.52
SLC40A1-204ENST00000427419 TBC1D10CQ8IV04 446 aa11.83□□□□□ -0.52
SLC40A1-204ENST00000427419 TMEM47Q9BQJ4 181 aa11.83□□□□□ -0.52
SLC40A1-204ENST00000427419 INCENPQ9NQS7 918 aa11.83□□□□□ -0.52
SLC40A1-204ENST00000427419 PRR12Q9ULL5 1215 aa11.83□□□□□ -0.52
SLC40A1-204ENST00000427419 ALPK3Q96L96 1907 aa11.82□□□□□ -0.52
SLC40A1-204ENST00000427419 ICAM1P05362 532 aa11.82□□□□□ -0.52
SLC40A1-204ENST00000427419 PDHBP11177 359 aa11.82□□□□□ -0.52
SLC40A1-204ENST00000427419 GSPT1P15170 499 aaKnown RBP11.82□□□□□ -0.52
SLC40A1-204ENST00000427419 PDE4AP27815 886 aa11.82□□□□□ -0.52
SLC40A1-204ENST00000427419 SLC4A3P48751 1232 aa11.82□□□□□ -0.52
SLC40A1-204ENST00000427419 IRX6P78412 446 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms