RNA–Protein interactions for RNA: ENST00000426856.1

CRIM1-203, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-203ENST00000426856 GIMAP6Q6P9H5 292 aa18.2■□□□□ 0.5
CRIM1-203ENST00000426856 NYAP2Q9P242 653 aa18.2■□□□□ 0.5
CRIM1-203ENST00000426856 IGKV6D-41A0A0C4DH26 115 aa18.19■□□□□ 0.5
CRIM1-203ENST00000426856 A0A1W2PQ45 241 aaPredicted RBP18.19■□□□□ 0.5
CRIM1-203ENST00000426856 A0A1W2PQY0 241 aa18.19■□□□□ 0.5
CRIM1-203ENST00000426856 M0R2C6 588 aa18.19■□□□□ 0.5
CRIM1-203ENST00000426856 RNF113AO15541 343 aaKnown RBP18.19■□□□□ 0.5
CRIM1-203ENST00000426856 GPAA1O43292 621 aa18.19■□□□□ 0.5
CRIM1-203ENST00000426856 ADAMTS4O75173 837 aa18.19■□□□□ 0.5
CRIM1-203ENST00000426856 AKR1A1P14550 325 aa18.19■□□□□ 0.5
CRIM1-203ENST00000426856 RNF180Q86T96 592 aa18.19■□□□□ 0.5
CRIM1-203ENST00000426856 CNPY2Q9Y2B0 182 aa18.19■□□□□ 0.5
CRIM1-203ENST00000426856 VCANP13611 3396 aa18.18■□□□□ 0.5
CRIM1-203ENST00000426856 DNAJC25-GNG10A0A024R161 153 aa18.18■□□□□ 0.5
CRIM1-203ENST00000426856 PRDM1O75626 825 aa18.18■□□□□ 0.5
CRIM1-203ENST00000426856 ZNF697Q5TEC3 545 aa18.18■□□□□ 0.5
CRIM1-203ENST00000426856 DCTPP1Q9H773 170 aa18.18■□□□□ 0.5
CRIM1-203ENST00000426856 CLIP2Q9UDT6 1046 aa18.18■□□□□ 0.5
CRIM1-203ENST00000426856 MCM3APO60318 1980 aa18.18■□□□□ 0.5
CRIM1-203ENST00000426856 PRUNE2Q8WUY3 3088 aa18.18■□□□□ 0.5
CRIM1-203ENST00000426856 SYNRGQ9UMZ2 1314 aa18.18■□□□□ 0.5
CRIM1-203ENST00000426856 PQBP1O60828 265 aaKnown RBP18.17■□□□□ 0.5
CRIM1-203ENST00000426856 SNAI1O95863 264 aaPredicted RBP18.17■□□□□ 0.5
CRIM1-203ENST00000426856 CLTBP09497 229 aa18.17■□□□□ 0.5
CRIM1-203ENST00000426856 SLC4A3P48751 1232 aa18.17■□□□□ 0.5
CRIM1-203ENST00000426856 TDO2P48775 406 aa18.17■□□□□ 0.5
CRIM1-203ENST00000426856 EPHB4P54760 987 aa18.17■□□□□ 0.5
CRIM1-203ENST00000426856 CPXCR1Q8N123 301 aa18.17■□□□□ 0.5
CRIM1-203ENST00000426856 PRPF38AQ8NAV1 312 aaKnown RBP18.17■□□□□ 0.5
CRIM1-203ENST00000426856 CEP95Q96GE4 821 aa18.17■□□□□ 0.5
CRIM1-203ENST00000426856 GPATCH3Q96I76 525 aa18.17■□□□□ 0.5
CRIM1-203ENST00000426856 ATP2A1O14983 1001 aa18.16■□□□□ 0.5
CRIM1-203ENST00000426856 MAMDC4Q6UXC1 1216 aa18.16■□□□□ 0.5
CRIM1-203ENST00000426856 LRRC47Q8N1G4 583 aaKnown RBP18.16■□□□□ 0.5
CRIM1-203ENST00000426856 MSL3Q8N5Y2 521 aaKnown RBP18.16■□□□□ 0.5
CRIM1-203ENST00000426856 KIFC2Q96AC6 838 aa18.16■□□□□ 0.5
CRIM1-203ENST00000426856 DDX11Q96FC9 970 aa18.16■□□□□ 0.5
CRIM1-203ENST00000426856 RAVER2Q9HCJ3 691 aaKnown RBP18.16■□□□□ 0.5
CRIM1-203ENST00000426856 TACC3Q9Y6A5 838 aa18.16■□□□□ 0.5
CRIM1-203ENST00000426856 SYNGAP1Q96PV0 1343 aa18.16■□□□□ 0.5
CRIM1-203ENST00000426856 MYADML2A6NDP7 307 aa18.15■□□□□ 0.5
CRIM1-203ENST00000426856 KIAA0355O15063 1070 aa18.15■□□□□ 0.5
CRIM1-203ENST00000426856 ADCY6O43306 1168 aa18.15■□□□□ 0.5
CRIM1-203ENST00000426856 APPP05067 770 aa18.15■□□□□ 0.5
CRIM1-203ENST00000426856 ZFYP08048 801 aaPredicted RBP18.15■□□□□ 0.5
CRIM1-203ENST00000426856 ACLYP53396 1101 aa18.15■□□□□ 0.5
CRIM1-203ENST00000426856 IRX5P78411 483 aaPredicted RBP18.15■□□□□ 0.5
CRIM1-203ENST00000426856 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.15■□□□□ 0.5
CRIM1-203ENST00000426856 KLHDC9Q8NEP7 349 aa18.15■□□□□ 0.5
CRIM1-203ENST00000426856 MKL1Q969V6 931 aa18.15■□□□□ 0.5
CRIM1-203ENST00000426856 FGD4Q96M96 766 aa18.15■□□□□ 0.5
CRIM1-203ENST00000426856 CDX2Q99626 313 aaPredicted RBP18.15■□□□□ 0.5
CRIM1-203ENST00000426856 SLC38A10Q9HBR0 1119 aa18.15■□□□□ 0.5
CRIM1-203ENST00000426856 MTMR4Q9NYA4 1195 aa18.15■□□□□ 0.5
CRIM1-203ENST00000426856 ZHX1Q9UKY1 873 aaPredicted RBP18.15■□□□□ 0.5
CRIM1-203ENST00000426856 ZBED4O75132 1171 aa18.14■□□□□ 0.49
CRIM1-203ENST00000426856 GNAT2P19087 354 aa18.14■□□□□ 0.49
CRIM1-203ENST00000426856 SMAD3P84022 425 aaKnown RBP18.14■□□□□ 0.49
CRIM1-203ENST00000426856 CCSAPQ6IQ19 270 aaPredicted RBP18.14■□□□□ 0.49
CRIM1-203ENST00000426856 IFNL3Q8IZI9 196 aa18.14■□□□□ 0.49
CRIM1-203ENST00000426856 ZNF444Q8N0Y2 327 aaPredicted RBP18.14■□□□□ 0.49
CRIM1-203ENST00000426856 SEC62Q99442 399 aaKnown RBP18.14■□□□□ 0.49
CRIM1-203ENST00000426856 TSEN34Q9BSV6 310 aaKnown RBP18.14■□□□□ 0.49
CRIM1-203ENST00000426856 TTYH1Q9H313 450 aaPredicted RBP18.14■□□□□ 0.49
CRIM1-203ENST00000426856 SEMA6BQ9H3T3 888 aa18.14■□□□□ 0.49
CRIM1-203ENST00000426856 FAM184BQ9ULE4 1060 aa18.14■□□□□ 0.49
CRIM1-203ENST00000426856 PLIN4Q96Q06 1357 aa18.14■□□□□ 0.49
CRIM1-203ENST00000426856 TTLL1O95922 423 aa18.13■□□□□ 0.49
CRIM1-203ENST00000426856 RAG1P15918 1043 aa18.13■□□□□ 0.49
CRIM1-203ENST00000426856 FAAP100Q0VG06 881 aa18.13■□□□□ 0.49
CRIM1-203ENST00000426856 KCNA10Q16322 511 aa18.13■□□□□ 0.49
CRIM1-203ENST00000426856 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.13■□□□□ 0.49
CRIM1-203ENST00000426856 ANKRD33Q7Z3H0 272 aa18.13■□□□□ 0.49
CRIM1-203ENST00000426856 ZNF467Q7Z7K2 595 aaPredicted RBP18.13■□□□□ 0.49
CRIM1-203ENST00000426856 GMCL1P1Q8NEA9 526 aa18.13■□□□□ 0.49
CRIM1-203ENST00000426856 OTUD7AQ8TE49 926 aaPredicted RBP18.13■□□□□ 0.49
CRIM1-203ENST00000426856 RNPC3Q96LT9 517 aaKnown RBP18.13■□□□□ 0.49
CRIM1-203ENST00000426856 COL25A1Q9BXS0 654 aaPredicted RBP18.13■□□□□ 0.49
CRIM1-203ENST00000426856 STARD7Q9NQZ5 370 aa18.13■□□□□ 0.49
CRIM1-203ENST00000426856 TMEM39AQ9NV64 488 aa18.13■□□□□ 0.49
CRIM1-203ENST00000426856 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.13■□□□□ 0.49
CRIM1-203ENST00000426856 FEM1BQ9UK73 627 aa18.13■□□□□ 0.49
CRIM1-203ENST00000426856 PATL2C9JE40 543 aaKnown RBP18.12■□□□□ 0.49
CRIM1-203ENST00000426856 DUSP11O75319 330 aaKnown RBP18.12■□□□□ 0.49
CRIM1-203ENST00000426856 ACVR2BQ13705 512 aa18.12■□□□□ 0.49
CRIM1-203ENST00000426856 ANKRD35Q8N283 1001 aa18.12■□□□□ 0.49
CRIM1-203ENST00000426856 PI4K2BQ8TCG2 481 aa18.12■□□□□ 0.49
CRIM1-203ENST00000426856 ZNF287Q9HBT7 754 aa18.12■□□□□ 0.49
CRIM1-203ENST00000426856 HOMER2Q9NSB8 354 aa18.12■□□□□ 0.49
CRIM1-203ENST00000426856 SYNPO2Q9UMS6 1093 aa18.12■□□□□ 0.49
CRIM1-203ENST00000426856 CTDP1Q9Y5B0 961 aaPredicted RBP18.12■□□□□ 0.49
CRIM1-203ENST00000426856 MOXD2PA6NHM9 499 aa18.11■□□□□ 0.49
CRIM1-203ENST00000426856 FPGSQ05932 587 aa18.11■□□□□ 0.49
CRIM1-203ENST00000426856 CCDC144BQ3MJ40 725 aa18.11■□□□□ 0.49
CRIM1-203ENST00000426856 SLFN13Q68D06 897 aa18.11■□□□□ 0.49
CRIM1-203ENST00000426856 NEDD1Q8NHV4 660 aa18.11■□□□□ 0.49
CRIM1-203ENST00000426856 NUP133Q8WUM0 1156 aa18.11■□□□□ 0.49
CRIM1-203ENST00000426856 MYLIPQ8WY64 445 aa18.11■□□□□ 0.49
CRIM1-203ENST00000426856 TOX2Q96NM4 488 aa18.11■□□□□ 0.49
CRIM1-203ENST00000426856 TTC41PQ6P2S7 1318 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms