RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.36■□□□□ 0.21
VEGFB-202ENST00000426086 DNAJC25-GNG10A0A024R161 153 aa16.35■□□□□ 0.21
VEGFB-202ENST00000426086 CCDC85BQ15834 202 aaPredicted RBP16.35■□□□□ 0.21
VEGFB-202ENST00000426086 C16orf86Q6ZW13 317 aa16.35■□□□□ 0.21
VEGFB-202ENST00000426086 ZNF365Q70YC5 407 aa16.35■□□□□ 0.21
VEGFB-202ENST00000426086 CCDC17Q96LX7 622 aa16.35■□□□□ 0.21
VEGFB-202ENST00000426086 PPP1R12CQ9BZL4 782 aa16.35■□□□□ 0.21
VEGFB-202ENST00000426086 SH2D4AQ9H788 454 aa16.35■□□□□ 0.21
VEGFB-202ENST00000426086 ZHX1Q9UKY1 873 aaPredicted RBP16.35■□□□□ 0.21
VEGFB-202ENST00000426086 CNPY2Q9Y2B0 182 aa16.35■□□□□ 0.21
VEGFB-202ENST00000426086 MOXD2PA6NHM9 499 aa16.34■□□□□ 0.21
VEGFB-202ENST00000426086 RAD21O60216 631 aa16.34■□□□□ 0.21
VEGFB-202ENST00000426086 ASGR1P07306 291 aa16.34■□□□□ 0.21
VEGFB-202ENST00000426086 ADD2P35612 726 aa16.34■□□□□ 0.21
VEGFB-202ENST00000426086 MAMDC4Q6UXC1 1216 aa16.34■□□□□ 0.21
VEGFB-202ENST00000426086 CCDC129Q6ZRS4 1044 aa16.34■□□□□ 0.21
VEGFB-202ENST00000426086 NUP133Q8WUM0 1156 aa16.34■□□□□ 0.21
VEGFB-202ENST00000426086 ASB2Q96Q27 587 aa16.34■□□□□ 0.21
VEGFB-202ENST00000426086 BCL11AQ9H165 835 aa16.34■□□□□ 0.21
VEGFB-202ENST00000426086 CXXC1Q9P0U4 656 aaPredicted RBP16.34■□□□□ 0.21
VEGFB-202ENST00000426086 FAM184BQ9ULE4 1060 aa16.34■□□□□ 0.21
VEGFB-202ENST00000426086 GREB1LQ9C091 1923 aaPredicted RBP16.33■□□□□ 0.21
VEGFB-202ENST00000426086 APBB1O00213 710 aa16.33■□□□□ 0.2
VEGFB-202ENST00000426086 CTAGE5O15320 804 aa16.33■□□□□ 0.2
VEGFB-202ENST00000426086 DUSP11O75319 330 aaKnown RBP16.33■□□□□ 0.2
VEGFB-202ENST00000426086 CST5P28325 142 aaPredicted RBP16.33■□□□□ 0.2
VEGFB-202ENST00000426086 PPIGQ13427 754 aaKnown RBP eCLIP16.33■□□□□ 0.28e-9■■□□□ 13.7
VEGFB-202ENST00000426086 SNRNP48Q6IEG0 339 aaKnown RBP16.33■□□□□ 0.2
VEGFB-202ENST00000426086 ERC1Q8IUD2 1116 aa16.33■□□□□ 0.2
VEGFB-202ENST00000426086 FAM126BQ8IXS8 530 aa16.33■□□□□ 0.2
VEGFB-202ENST00000426086 ADAMTS19Q8TE59 1207 aa16.33■□□□□ 0.2
VEGFB-202ENST00000426086 ATXN2LQ8WWM7 1075 aaKnown RBP16.33■□□□□ 0.2
VEGFB-202ENST00000426086 GAS2L1Q99501 681 aaPredicted RBP16.33■□□□□ 0.2
VEGFB-202ENST00000426086 KANSL2Q9H9L4 492 aa16.33■□□□□ 0.2
VEGFB-202ENST00000426086 ATP8A2Q9NTI2 1148 aa16.33■□□□□ 0.2
VEGFB-202ENST00000426086 THEGQ9P2T0 379 aa16.33■□□□□ 0.2
VEGFB-202ENST00000426086 SYNGAP1Q96PV0 1343 aa16.33■□□□□ 0.2
VEGFB-202ENST00000426086 GBF1Q92538 1859 aa16.33■□□□□ 0.2
VEGFB-202ENST00000426086 MCM3APO60318 1980 aa16.33■□□□□ 0.2
VEGFB-202ENST00000426086 ELP1O95163 1332 aa16.32■□□□□ 0.2
VEGFB-202ENST00000426086 C6orf222P0C671 652 aaPredicted RBP16.32■□□□□ 0.2
VEGFB-202ENST00000426086 PTGS1P23219 599 aa16.32■□□□□ 0.2
VEGFB-202ENST00000426086 SLC4A3P48751 1232 aa16.32■□□□□ 0.2
VEGFB-202ENST00000426086 UMODL1Q5DID0 1318 aa16.32■□□□□ 0.2
VEGFB-202ENST00000426086 AKNAD1Q5T1N1 836 aa16.32■□□□□ 0.2
VEGFB-202ENST00000426086 CTR9Q6PD62 1173 aa16.32■□□□□ 0.2
VEGFB-202ENST00000426086 FTSJ3Q8IY81 847 aaKnown RBP16.32■□□□□ 0.2
VEGFB-202ENST00000426086 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.32■□□□□ 0.2
VEGFB-202ENST00000426086 GLT1D1Q96MS3 346 aa16.32■□□□□ 0.2
VEGFB-202ENST00000426086 NKX2-4Q9H2Z4 354 aa16.32■□□□□ 0.2
VEGFB-202ENST00000426086 BOLA2Q9H3K6 86 aa16.32■□□□□ 0.2
VEGFB-202ENST00000426086 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.32■□□□□ 0.2
VEGFB-202ENST00000426086 YBX2Q9Y2T7 364 aaKnown RBP16.32■□□□□ 0.2
VEGFB-202ENST00000426086 ZBED9Q6R2W3 1325 aa16.31■□□□□ 0.2
VEGFB-202ENST00000426086 ARVCFO00192 962 aa16.31■□□□□ 0.2
VEGFB-202ENST00000426086 CYP2C18P33260 490 aa16.31■□□□□ 0.2
VEGFB-202ENST00000426086 ACVR2BQ13705 512 aa16.31■□□□□ 0.2
VEGFB-202ENST00000426086 CCDC144BQ3MJ40 725 aa16.31■□□□□ 0.2
VEGFB-202ENST00000426086 CPXCR1Q8N123 301 aa16.31■□□□□ 0.2
VEGFB-202ENST00000426086 MSL3Q8N5Y2 521 aaKnown RBP16.31■□□□□ 0.2
VEGFB-202ENST00000426086 DDX11Q96FC9 970 aa16.31■□□□□ 0.2
VEGFB-202ENST00000426086 NECAB3Q96P71 396 aaPredicted RBP16.31■□□□□ 0.2
VEGFB-202ENST00000426086 SLF1Q9BQI6 1058 aa16.31■□□□□ 0.2
VEGFB-202ENST00000426086 TEX13BQ9BXU2 312 aa16.31■□□□□ 0.2
VEGFB-202ENST00000426086 KATNBL1Q9H079 304 aa16.31■□□□□ 0.2
VEGFB-202ENST00000426086 UPF3AQ9H1J1 476 aaKnown RBP16.31■□□□□ 0.2
VEGFB-202ENST00000426086 GOPCQ9HD26 462 aa16.31■□□□□ 0.2
VEGFB-202ENST00000426086 TTC28Q96AY4 2481 aa16.31■□□□□ 0.2
VEGFB-202ENST00000426086 ASTN1O14525 1302 aa16.3■□□□□ 0.2
VEGFB-202ENST00000426086 CD4P01730 458 aa16.3■□□□□ 0.2
VEGFB-202ENST00000426086 IGFBP4P22692 258 aa16.3■□□□□ 0.2
VEGFB-202ENST00000426086 COPB2P35606 906 aa16.3■□□□□ 0.2
VEGFB-202ENST00000426086 GJA9P57773 515 aa16.3■□□□□ 0.2
VEGFB-202ENST00000426086 BEX3Q00994 111 aa16.3■□□□□ 0.2
VEGFB-202ENST00000426086 STK11IPQ8N1F8 1099 aa16.3■□□□□ 0.2
VEGFB-202ENST00000426086 PANK1Q8TE04 598 aa16.3■□□□□ 0.2
VEGFB-202ENST00000426086 VTI1AQ96AJ9 217 aa16.3■□□□□ 0.2
VEGFB-202ENST00000426086 RAVER2Q9HCJ3 691 aaKnown RBP16.3■□□□□ 0.2
VEGFB-202ENST00000426086 PAG1Q9NWQ8 432 aa16.3■□□□□ 0.2
VEGFB-202ENST00000426086 MROH7Q68CQ1 1323 aa16.29■□□□□ 0.2
VEGFB-202ENST00000426086 A0A0U1RQG5 324 aaPredicted RBP16.29■□□□□ 0.2
VEGFB-202ENST00000426086 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.29■□□□□ 0.2
VEGFB-202ENST00000426086 NDUFB10O96000 172 aa16.29■□□□□ 0.2
VEGFB-202ENST00000426086 GNASQ5JWF2 1037 aa16.29■□□□□ 0.2
VEGFB-202ENST00000426086 SIRT2Q8IXJ6 389 aa16.29■□□□□ 0.2
VEGFB-202ENST00000426086 CLASRPQ8N2M8 674 aaKnown RBP16.29■□□□□ 0.2
VEGFB-202ENST00000426086 TMEM199Q8N511 208 aa16.29■□□□□ 0.2
VEGFB-202ENST00000426086 HERVK_113Q902F9 699 aa16.29■□□□□ 0.2
VEGFB-202ENST00000426086 VWCEQ96DN2 955 aa16.29■□□□□ 0.2
VEGFB-202ENST00000426086 UHRF1Q96T88 793 aaPredicted RBP16.29■□□□□ 0.2
VEGFB-202ENST00000426086 PUS7LQ9H0K6 701 aaKnown RBP16.29■□□□□ 0.2
VEGFB-202ENST00000426086 SLC4A4Q9Y6R1 1079 aa16.29■□□□□ 0.2
VEGFB-202ENST00000426086 DDX49Q9Y6V7 483 aaKnown RBP16.29■□□□□ 0.2
VEGFB-202ENST00000426086 F5H6K3 240 aa16.28■□□□□ 0.2
VEGFB-202ENST00000426086 IFIT2P09913 472 aaKnown RBP16.28■□□□□ 0.2
VEGFB-202ENST00000426086 MYOGP15173 224 aa16.28■□□□□ 0.2
VEGFB-202ENST00000426086 RASA1P20936 1047 aa16.28■□□□□ 0.2
VEGFB-202ENST00000426086 RABGGTBP53611 331 aa16.28■□□□□ 0.2
VEGFB-202ENST00000426086 MRPS5P82675 430 aaKnown RBP16.28■□□□□ 0.2
VEGFB-202ENST00000426086 KLRC3Q07444 240 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms