RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 FBXL16Q8N461 479 aa28.6■■■□□ 2.17
VEGFA-209ENST00000425836 REPS2Q8NFH8 660 aa28.59■■■□□ 2.17
VEGFA-209ENST00000425836 MYL10Q9BUA6 226 aa28.59■■■□□ 2.17
VEGFA-209ENST00000425836 PRDM10Q9NQV6 1147 aa28.59■■■□□ 2.17
VEGFA-209ENST00000425836 PRR12Q9ULL5 1215 aa28.59■■■□□ 2.17
VEGFA-209ENST00000425836 DDAH1O94760 285 aa28.58■■■□□ 2.17
VEGFA-209ENST00000425836 CAP1Q01518 475 aa28.58■■■□□ 2.17
VEGFA-209ENST00000425836 GRM4Q14833 912 aa28.58■■■□□ 2.17
VEGFA-209ENST00000425836 TMEM132BQ14DG7 1078 aa28.58■■■□□ 2.17
VEGFA-209ENST00000425836 STAG2Q8N3U4 1231 aa28.58■■■□□ 2.17
VEGFA-209ENST00000425836 CD99L2Q8TCZ2 262 aa28.58■■■□□ 2.17
VEGFA-209ENST00000425836 NUP133Q8WUM0 1156 aa28.58■■■□□ 2.17
VEGFA-209ENST00000425836 AGXT2Q9BYV1 514 aa28.58■■■□□ 2.17
VEGFA-209ENST00000425836 MAD2L2Q9UI95 211 aa28.58■■■□□ 2.17
VEGFA-209ENST00000425836 BRPF3Q9ULD4 1205 aa28.58■■■□□ 2.17
VEGFA-209ENST00000425836 SLC12A7Q9Y666 1083 aa28.58■■■□□ 2.17
VEGFA-209ENST00000425836 PALM3A6NDB9 673 aaPredicted RBP28.58■■■□□ 2.17
VEGFA-209ENST00000425836 SYDE2Q5VT97 1194 aa28.58■■■□□ 2.17
VEGFA-209ENST00000425836 ERO1AQ96HE7 468 aa28.58■■■□□ 2.17
VEGFA-209ENST00000425836 ARHGAP39Q9C0H5 1083 aa28.58■■■□□ 2.17
VEGFA-209ENST00000425836 UBA5Q9GZZ9 404 aa28.58■■■□□ 2.17
VEGFA-209ENST00000425836 UPF2Q9HAU5 1272 aaKnown RBP28.58■■■□□ 2.17
VEGFA-209ENST00000425836 SLC38A10Q9HBR0 1119 aa28.58■■■□□ 2.17
VEGFA-209ENST00000425836 RLFQ13129 1914 aa28.57■■■□□ 2.16
VEGFA-209ENST00000425836 ZBED4O75132 1171 aa28.57■■■□□ 2.16
VEGFA-209ENST00000425836 CTGFP29279 349 aa28.57■■■□□ 2.16
VEGFA-209ENST00000425836 RBM25P49756 843 aaKnown RBP28.57■■■□□ 2.16
VEGFA-209ENST00000425836 BRF1Q92994 677 aa28.57■■■□□ 2.16
VEGFA-209ENST00000425836 MAP3K14Q99558 947 aa28.57■■■□□ 2.16
VEGFA-209ENST00000425836 CPVLQ9H3G5 476 aa28.57■■■□□ 2.16
VEGFA-209ENST00000425836 PDRG1Q9NUG6 133 aa28.57■■■□□ 2.16
VEGFA-209ENST00000425836 ECM2O94769 699 aaPredicted RBP28.56■■■□□ 2.16
VEGFA-209ENST00000425836 SPATC1LQ9H0A9 340 aa28.56■■■□□ 2.16
VEGFA-209ENST00000425836 FDX1P10109 184 aa28.55■■■□□ 2.16
VEGFA-209ENST00000425836 KIF22Q14807 665 aa28.55■■■□□ 2.16
VEGFA-209ENST00000425836 APOA5Q6Q788 366 aa28.55■■■□□ 2.16
VEGFA-209ENST00000425836 SYNE3Q6ZMZ3 975 aa28.55■■■□□ 2.16
VEGFA-209ENST00000425836 RAB11FIP4Q86YS3 637 aa28.55■■■□□ 2.16
VEGFA-209ENST00000425836 ZNF214Q9UL59 606 aaPredicted RBP28.55■■■□□ 2.16
VEGFA-209ENST00000425836 KLF18A0A0U1RQI7 1052 aa28.54■■■□□ 2.16
VEGFA-209ENST00000425836 KLRF2D3W0D1 207 aa28.54■■■□□ 2.16
VEGFA-209ENST00000425836 CALM1P0DP23 149 aa28.54■■■□□ 2.16
VEGFA-209ENST00000425836 CALM2P0DP24 149 aa28.54■■■□□ 2.16
VEGFA-209ENST00000425836 CALM3P0DP25 149 aa28.54■■■□□ 2.16
VEGFA-209ENST00000425836 RXRAP19793 462 aa28.54■■■□□ 2.16
VEGFA-209ENST00000425836 PSMC4P43686 418 aa28.54■■■□□ 2.16
VEGFA-209ENST00000425836 SNAP25P60880 206 aa28.54■■■□□ 2.16
VEGFA-209ENST00000425836 APOBRQ0VD83 1088 aa28.54■■■□□ 2.16
VEGFA-209ENST00000425836 TOB2Q14106 344 aaPredicted RBP28.54■■■□□ 2.16
VEGFA-209ENST00000425836 PLS1Q14651 629 aa28.54■■■□□ 2.16
VEGFA-209ENST00000425836 KIF2CQ99661 725 aa28.54■■■□□ 2.16
VEGFA-209ENST00000425836 PORCNQ9H237 461 aa28.54■■■□□ 2.16
VEGFA-209ENST00000425836 CCNA1P78396 465 aa28.54■■■□□ 2.16
VEGFA-209ENST00000425836 CTCFLQ8NI51 663 aaPredicted RBP28.54■■■□□ 2.16
VEGFA-209ENST00000425836 TRIM47Q96LD4 638 aa28.54■■■□□ 2.16
VEGFA-209ENST00000425836 MOV10L1Q9BXT6 1211 aaKnown RBP28.54■■■□□ 2.16
VEGFA-209ENST00000425836 CTDP1Q9Y5B0 961 aaPredicted RBP28.54■■■□□ 2.16
VEGFA-209ENST00000425836 MICU3Q86XE3 530 aa28.53■■■□□ 2.16
VEGFA-209ENST00000425836 RANBP17Q9H2T7 1088 aaKnown RBP28.53■■■□□ 2.16
VEGFA-209ENST00000425836 EFCC1Q9HA90 598 aa28.53■■■□□ 2.16
VEGFA-209ENST00000425836 RAVER2Q9HCJ3 691 aaKnown RBP28.53■■■□□ 2.16
VEGFA-209ENST00000425836 ATP2A1O14983 1001 aa28.52■■■□□ 2.16
VEGFA-209ENST00000425836 STAT3P40763 770 aa28.52■■■□□ 2.16
VEGFA-209ENST00000425836 FCGRTP55899 365 aa28.52■■■□□ 2.16
VEGFA-209ENST00000425836 CCDC144CPQ8IYA2 1237 aa28.52■■■□□ 2.16
VEGFA-209ENST00000425836 CPXCR1Q8N123 301 aa28.52■■■□□ 2.16
VEGFA-209ENST00000425836 FANCBQ8NB91 859 aa28.52■■■□□ 2.16
VEGFA-209ENST00000425836 ZBTB43O43298 467 aa28.51■■■□□ 2.15
VEGFA-209ENST00000425836 FMNL1O95466 1100 aaPredicted RBP28.51■■■□□ 2.15
VEGFA-209ENST00000425836 KIF5BP33176 963 aa28.51■■■□□ 2.15
VEGFA-209ENST00000425836 EVCP57679 992 aa28.51■■■□□ 2.15
VEGFA-209ENST00000425836 RIOX2Q8IUF8 465 aa28.51■■■□□ 2.15
VEGFA-209ENST00000425836 ADGRF4Q8IZF3 695 aa28.51■■■□□ 2.15
VEGFA-209ENST00000425836 TBC1D32Q96NH3 1257 aa28.51■■■□□ 2.15
VEGFA-209ENST00000425836 ALDH8A1Q9H2A2 487 aaPredicted RBP28.51■■■□□ 2.15
VEGFA-209ENST00000425836 ZNF536O15090 1300 aa28.51■■■□□ 2.15
VEGFA-209ENST00000425836 A0A0G2JMZ2 1700 aa28.51■■■□□ 2.15
VEGFA-209ENST00000425836 PARP14Q460N5 1801 aa28.5■■■□□ 2.15
VEGFA-209ENST00000425836 MAPK4P31152 587 aa28.5■■■□□ 2.15
VEGFA-209ENST00000425836 OAZ1P54368 228 aa28.5■■■□□ 2.15
VEGFA-209ENST00000425836 SLC35G1Q2M3R5 365 aa28.5■■■□□ 2.15
VEGFA-209ENST00000425836 CCDC174Q6PII3 467 aa28.5■■■□□ 2.15
VEGFA-209ENST00000425836 NBPF11Q86T75 865 aa28.5■■■□□ 2.15
VEGFA-209ENST00000425836 TEX13BQ9BXU2 312 aa28.5■■■□□ 2.15
VEGFA-209ENST00000425836 ERCC3P19447 782 aa28.5■■■□□ 2.15
VEGFA-209ENST00000425836 NEK4P51957 841 aa28.5■■■□□ 2.15
VEGFA-209ENST00000425836 ARHGEF6Q15052 776 aa28.5■■■□□ 2.15
VEGFA-209ENST00000425836 CCAR1Q8IX12 1150 aaKnown RBP28.5■■■□□ 2.15
VEGFA-209ENST00000425836 SHCBP1Q8NEM2 672 aa28.5■■■□□ 2.15
VEGFA-209ENST00000425836 JMJD4Q9H9V9 463 aa28.5■■■□□ 2.15
VEGFA-209ENST00000425836 VAT1LQ9HCJ6 419 aa28.5■■■□□ 2.15
VEGFA-209ENST00000425836 NAP1L2Q9ULW6 460 aaPredicted RBP28.5■■■□□ 2.15
VEGFA-209ENST00000425836 RCAN1P53805 252 aa28.49■■■□□ 2.15
VEGFA-209ENST00000425836 SNRNP48Q6IEG0 339 aaKnown RBP28.49■■■□□ 2.15
VEGFA-209ENST00000425836 OTOP1Q7RTM1 612 aa28.49■■■□□ 2.15
VEGFA-209ENST00000425836 AGBL1Q96MI9 1066 aa28.49■■■□□ 2.15
VEGFA-209ENST00000425836 LARP6Q9BRS8 491 aaKnown RBP28.49■■■□□ 2.15
VEGFA-209ENST00000425836 RIPK3Q9Y572 518 aa28.49■■■□□ 2.15
VEGFA-209ENST00000425836 TNPO2O14787 897 aaKnown RBP28.48■■■□□ 2.15
VEGFA-209ENST00000425836 SLC25A27O95847 323 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms