RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 GOPCQ9HD26 462 aa18.76■□□□□ 0.59
RPUSD3-204ENST00000424438 EXOC6BQ9Y2D4 811 aa18.76■□□□□ 0.59
RPUSD3-204ENST00000424438 DNAJC25-GNG10A0A024R161 153 aa18.75■□□□□ 0.59
RPUSD3-204ENST00000424438 PQBP1O60828 265 aaKnown RBP18.75■□□□□ 0.59
RPUSD3-204ENST00000424438 DUSP11O75319 330 aaKnown RBP18.75■□□□□ 0.59
RPUSD3-204ENST00000424438 PGK2P07205 417 aa18.75■□□□□ 0.59
RPUSD3-204ENST00000424438 RLBP1P12271 317 aa18.75■□□□□ 0.59
RPUSD3-204ENST00000424438 PPIGQ13427 754 aaKnown RBP eCLIP18.75■□□□□ 0.59
RPUSD3-204ENST00000424438 AKNAD1Q5T1N1 836 aa18.75■□□□□ 0.59
RPUSD3-204ENST00000424438 MFSD5Q6N075 450 aa18.75■□□□□ 0.59
RPUSD3-204ENST00000424438 KIF1BPQ96EK5 621 aa18.75■□□□□ 0.59
RPUSD3-204ENST00000424438 DYNLL2Q96FJ2 89 aa18.75■□□□□ 0.59
RPUSD3-204ENST00000424438 TEX13BQ9BXU2 312 aa18.75■□□□□ 0.59
RPUSD3-204ENST00000424438 STARD7Q9NQZ5 370 aa18.75■□□□□ 0.59
RPUSD3-204ENST00000424438 FAM184BQ9ULE4 1060 aa18.75■□□□□ 0.59
RPUSD3-204ENST00000424438 HCN4Q9Y3Q4 1203 aa18.75■□□□□ 0.59
RPUSD3-204ENST00000424438 SYNRGQ9UMZ2 1314 aa18.74■□□□□ 0.59
RPUSD3-204ENST00000424438 GOLIM4O00461 696 aa18.74■□□□□ 0.59
RPUSD3-204ENST00000424438 EEF2P13639 858 aaKnown RBP18.74■□□□□ 0.59
RPUSD3-204ENST00000424438 TAL1P17542 331 aaPredicted RBP18.74■□□□□ 0.59
RPUSD3-204ENST00000424438 ADD2P35612 726 aa18.74■□□□□ 0.59
RPUSD3-204ENST00000424438 CDK7P50613 346 aa18.74■□□□□ 0.59
RPUSD3-204ENST00000424438 NKX3-2P78367 333 aa18.74■□□□□ 0.59
RPUSD3-204ENST00000424438 CLEC10AQ8IUN9 316 aa18.74■□□□□ 0.59
RPUSD3-204ENST00000424438 FBXO28Q9NVF7 368 aa18.74■□□□□ 0.59
RPUSD3-204ENST00000424438 CHD9Q3L8U1 2897 aa18.73■□□□□ 0.59
RPUSD3-204ENST00000424438 PCSK9Q8NBP7 692 aaKnown RBP18.73■□□□□ 0.59
RPUSD3-204ENST00000424438 DDRGK1Q96HY6 314 aa18.73■□□□□ 0.59
RPUSD3-204ENST00000424438 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.73■□□□□ 0.59
RPUSD3-204ENST00000424438 UPF3AQ9H1J1 476 aaKnown RBP18.73■□□□□ 0.59
RPUSD3-204ENST00000424438 ARMT1Q9H993 441 aa18.73■□□□□ 0.59
RPUSD3-204ENST00000424438 USP17L12C9JPN9 530 aa18.72■□□□□ 0.59
RPUSD3-204ENST00000424438 USP17L21D6R901 530 aa18.72■□□□□ 0.59
RPUSD3-204ENST00000424438 MBD4O95243 580 aa18.72■□□□□ 0.59
RPUSD3-204ENST00000424438 SNAI1O95863 264 aaPredicted RBP18.72■□□□□ 0.59
RPUSD3-204ENST00000424438 UBE3CQ15386 1083 aa18.72■□□□□ 0.59
RPUSD3-204ENST00000424438 GLT1D1Q96MS3 346 aa18.72■□□□□ 0.59
RPUSD3-204ENST00000424438 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.72■□□□□ 0.598e-7■■■■■ 32.7
RPUSD3-204ENST00000424438 TSPYL2Q9H2G4 693 aaPredicted RBP18.72■□□□□ 0.59
RPUSD3-204ENST00000424438 IL1RAPL2Q9NP60 686 aa18.72■□□□□ 0.59
RPUSD3-204ENST00000424438 SYNPO2Q9UMS6 1093 aa18.72■□□□□ 0.59
RPUSD3-204ENST00000424438 MCM3APO60318 1980 aa18.72■□□□□ 0.59
RPUSD3-204ENST00000424438 PIEZO1Q92508 2521 aa18.71■□□□□ 0.59
RPUSD3-204ENST00000424438 KCNA10Q16322 511 aa18.71■□□□□ 0.59
RPUSD3-204ENST00000424438 TMEM240Q5SV17 173 aa18.71■□□□□ 0.59
RPUSD3-204ENST00000424438 PSRC1Q6PGN9 363 aaPredicted RBP18.71■□□□□ 0.59
RPUSD3-204ENST00000424438 CCDC129Q6ZRS4 1044 aa18.71■□□□□ 0.59
RPUSD3-204ENST00000424438 ABHD16BQ9H3Z7 469 aa18.71■□□□□ 0.59
RPUSD3-204ENST00000424438 PAG1Q9NWQ8 432 aa18.71■□□□□ 0.59
RPUSD3-204ENST00000424438 NYAP2Q9P242 653 aa18.71■□□□□ 0.59
RPUSD3-204ENST00000424438 ARIH1Q9Y4X5 557 aaPredicted RBP18.71■□□□□ 0.59
RPUSD3-204ENST00000424438 PRKAB2O43741 272 aa18.7■□□□□ 0.58
RPUSD3-204ENST00000424438 IFIT2P09913 472 aaKnown RBP18.7■□□□□ 0.58
RPUSD3-204ENST00000424438 ATP5JP18859 108 aa18.7■□□□□ 0.58
RPUSD3-204ENST00000424438 GJA9P57773 515 aa18.7■□□□□ 0.58
RPUSD3-204ENST00000424438 CCDC85BQ15834 202 aaPredicted RBP18.7■□□□□ 0.58
RPUSD3-204ENST00000424438 RPAP2Q8IXW5 612 aaPredicted RBP18.7■□□□□ 0.58
RPUSD3-204ENST00000424438 PRPF38AQ8NAV1 312 aaKnown RBP18.7■□□□□ 0.58
RPUSD3-204ENST00000424438 DNAJC2Q99543 621 aaKnown RBP18.7■□□□□ 0.58
RPUSD3-204ENST00000424438 SLF1Q9BQI6 1058 aa18.7■□□□□ 0.58
RPUSD3-204ENST00000424438 SEZ6LQ9BYH1 1024 aa18.7■□□□□ 0.58
RPUSD3-204ENST00000424438 PRDM12Q9H4Q4 367 aa18.7■□□□□ 0.58
RPUSD3-204ENST00000424438 SPC25Q9HBM1 224 aa18.7■□□□□ 0.58
RPUSD3-204ENST00000424438 ARPP21Q9UBL0 812 aaPredicted RBP18.7■□□□□ 0.58
RPUSD3-204ENST00000424438 A0A0U1RQG5 324 aaPredicted RBP18.69■□□□□ 0.58
RPUSD3-204ENST00000424438 RAB11FIP3O75154 756 aa18.69■□□□□ 0.58
RPUSD3-204ENST00000424438 IGFBP4P22692 258 aa18.69■□□□□ 0.58
RPUSD3-204ENST00000424438 SBK1Q52WX2 424 aa18.69■□□□□ 0.58
RPUSD3-204ENST00000424438 FAM83BQ5T0W9 1011 aa18.69■□□□□ 0.58
RPUSD3-204ENST00000424438 GIMAP6Q6P9H5 292 aa18.69■□□□□ 0.58
RPUSD3-204ENST00000424438 C16orf59Q7L2K0 433 aa18.69■□□□□ 0.58
RPUSD3-204ENST00000424438 TMEM199Q8N511 208 aa18.69■□□□□ 0.58
RPUSD3-204ENST00000424438 DDX11Q96FC9 970 aa18.69■□□□□ 0.58
RPUSD3-204ENST00000424438 HAUS7Q99871 368 aa18.69■□□□□ 0.58
RPUSD3-204ENST00000424438 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.69■□□□□ 0.58
RPUSD3-204ENST00000424438 FBXO40Q9UH90 709 aa18.69■□□□□ 0.58
RPUSD3-204ENST00000424438 ARVCFO00192 962 aa18.68■□□□□ 0.58
RPUSD3-204ENST00000424438 HMMRO75330 724 aa18.68■□□□□ 0.58
RPUSD3-204ENST00000424438 OAZ1P54368 228 aa18.68■□□□□ 0.58
RPUSD3-204ENST00000424438 ACVR2BQ13705 512 aa18.68■□□□□ 0.58
RPUSD3-204ENST00000424438 RAB30Q15771 203 aa18.68■□□□□ 0.58
RPUSD3-204ENST00000424438 SNRNP48Q6IEG0 339 aaKnown RBP18.68■□□□□ 0.58
RPUSD3-204ENST00000424438 CTR9Q6PD62 1173 aa18.68■□□□□ 0.58
RPUSD3-204ENST00000424438 FAM126BQ8IXS8 530 aa18.68■□□□□ 0.58
RPUSD3-204ENST00000424438 LENG1Q96BZ8 264 aaPredicted RBP18.68■□□□□ 0.58
RPUSD3-204ENST00000424438 PBX4Q9BYU1 374 aa18.68■□□□□ 0.58
RPUSD3-204ENST00000424438 MYH4Q9Y623 1939 aa18.68■□□□□ 0.58
RPUSD3-204ENST00000424438 TLR3O15455 904 aaKnown RBP18.67■□□□□ 0.58
RPUSD3-204ENST00000424438 ASGR1P07306 291 aa18.67■□□□□ 0.58
RPUSD3-204ENST00000424438 FDX1P10109 184 aa18.67■□□□□ 0.58
RPUSD3-204ENST00000424438 ZSCAN25Q6NSZ9 544 aa18.67■□□□□ 0.58
RPUSD3-204ENST00000424438 SAMD1Q6SPF0 538 aaPredicted RBP18.67■□□□□ 0.58
RPUSD3-204ENST00000424438 SLC43A3Q8NBI5 491 aa18.67■□□□□ 0.58
RPUSD3-204ENST00000424438 CHST13Q8NET6 341 aa18.67■□□□□ 0.58
RPUSD3-204ENST00000424438 HERVK_113Q902F9 699 aa18.67■□□□□ 0.58
RPUSD3-204ENST00000424438 MTIF3Q9H2K0 278 aaKnown RBP18.67■□□□□ 0.58
RPUSD3-204ENST00000424438 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.67■□□□□ 0.58
RPUSD3-204ENST00000424438 CYP2D7A0A087X1C5 515 aa18.66■□□□□ 0.58
RPUSD3-204ENST00000424438 CD4P01730 458 aa18.66■□□□□ 0.58
RPUSD3-204ENST00000424438 MS4A1P11836 297 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms