RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 SHMT1P34896 483 aa18.84■□□□□ 0.61
CMTM3-202ENST00000424011 NLRP12P59046 1061 aa18.84■□□□□ 0.61
CMTM3-202ENST00000424011 GRIN1Q05586 938 aa18.84■□□□□ 0.61
CMTM3-202ENST00000424011 NFIAQ12857 509 aa18.84■□□□□ 0.61
CMTM3-202ENST00000424011 SPECC1Q5M775 1068 aa18.84■□□□□ 0.61
CMTM3-202ENST00000424011 KANK3Q6NY19 840 aa18.84■□□□□ 0.61
CMTM3-202ENST00000424011 ZNF771Q7L3S4 317 aaPredicted RBP18.84■□□□□ 0.61
CMTM3-202ENST00000424011 KIAA1524Q8TCG1 905 aa18.84■□□□□ 0.61
CMTM3-202ENST00000424011 ANKRD7Q92527 254 aa18.84■□□□□ 0.61
CMTM3-202ENST00000424011 FEZ1Q99689 392 aa18.84■□□□□ 0.61
CMTM3-202ENST00000424011 BPIFA3Q9BQP9 254 aa18.84■□□□□ 0.61
CMTM3-202ENST00000424011 FAM205CA6NFA0 338 aa18.84■□□□□ 0.61
CMTM3-202ENST00000424011 hCG_1984214I3L0E3 225 aa18.84■□□□□ 0.61
CMTM3-202ENST00000424011 GOLGA8HP0CJ92 632 aa18.84■□□□□ 0.61
CMTM3-202ENST00000424011 WWC2Q6AWC2 1192 aa18.84■□□□□ 0.61
CMTM3-202ENST00000424011 USP17L2Q6R6M4 530 aa18.84■□□□□ 0.61
CMTM3-202ENST00000424011 ZNF713Q8N859 430 aaPredicted RBP18.84■□□□□ 0.61
CMTM3-202ENST00000424011 GPKOWQ92917 476 aaPredicted RBP eCLIP18.84■□□□□ 0.61
CMTM3-202ENST00000424011 ZNF277Q9NRM2 450 aaPredicted RBP18.84■□□□□ 0.61
CMTM3-202ENST00000424011 SPTLC3Q9NUV7 552 aa18.84■□□□□ 0.61
CMTM3-202ENST00000424011 STXBP3O00186 592 aa18.83■□□□□ 0.61
CMTM3-202ENST00000424011 PDHBP11177 359 aa18.83■□□□□ 0.61
CMTM3-202ENST00000424011 TRIM34Q9BYJ4 488 aa18.83■□□□□ 0.61
CMTM3-202ENST00000424011 TUBE1Q9UJT0 475 aa18.83■□□□□ 0.61
CMTM3-202ENST00000424011 VEGFAP15692 232 aaPredicted RBP18.83■□□□□ 0.6
CMTM3-202ENST00000424011 CCDC144BQ3MJ40 725 aa18.83■□□□□ 0.6
CMTM3-202ENST00000424011 LONRF3Q496Y0 759 aa18.83■□□□□ 0.6
CMTM3-202ENST00000424011 ISM2Q6H9L7 571 aa18.83■□□□□ 0.6
CMTM3-202ENST00000424011 MRFAP1L1Q96HT8 127 aa18.83■□□□□ 0.6
CMTM3-202ENST00000424011 CSRNP2Q9H175 543 aa18.83■□□□□ 0.6
CMTM3-202ENST00000424011 SCN9AQ15858 1988 aa18.82■□□□□ 0.6
CMTM3-202ENST00000424011 CCDC194A0A1B0GVG4 234 aa18.82■□□□□ 0.6
CMTM3-202ENST00000424011 GNA11P29992 359 aa18.82■□□□□ 0.6
CMTM3-202ENST00000424011 ATP2C1P98194 919 aaPredicted RBP18.82■□□□□ 0.6
CMTM3-202ENST00000424011 LRMPQ12912 555 aa18.82■□□□□ 0.6
CMTM3-202ENST00000424011 PNOCQ13519 176 aa18.82■□□□□ 0.6
CMTM3-202ENST00000424011 ZNF174Q15697 407 aa18.82■□□□□ 0.6
CMTM3-202ENST00000424011 SLC35G1Q2M3R5 365 aa18.82■□□□□ 0.6
CMTM3-202ENST00000424011 LARGE2Q8N3Y3 721 aa18.82■□□□□ 0.6
CMTM3-202ENST00000424011 SNHG28P0DPA3 235 aa18.82■□□□□ 0.6
CMTM3-202ENST00000424011 FOXP4Q8IVH2 680 aaPredicted RBP18.82■□□□□ 0.6
CMTM3-202ENST00000424011 ZMYND12Q9H0C1 365 aa18.82■□□□□ 0.6
CMTM3-202ENST00000424011 RIOX1Q9H6W3 641 aa18.82■□□□□ 0.6
CMTM3-202ENST00000424011 USP17L5A8MUK1 530 aa18.81■□□□□ 0.6
CMTM3-202ENST00000424011 MPHOSPH10O00566 681 aaKnown RBP18.81■□□□□ 0.6
CMTM3-202ENST00000424011 POLR2DO15514 142 aaKnown RBP18.81■□□□□ 0.6
CMTM3-202ENST00000424011 METTL16Q86W50 562 aaKnown RBP18.81■□□□□ 0.6
CMTM3-202ENST00000424011 ZSCAN29Q8IWY8 852 aaPredicted RBP18.81■□□□□ 0.6
CMTM3-202ENST00000424011 PYM1Q9BRP8 204 aaKnown RBP18.81■□□□□ 0.6
CMTM3-202ENST00000424011 C6orf50Q9HD87 102 aa18.81■□□□□ 0.6
CMTM3-202ENST00000424011 FAM198AQ9UFP1 575 aa18.81■□□□□ 0.6
CMTM3-202ENST00000424011 M0R2N6 131 aa18.8■□□□□ 0.6
CMTM3-202ENST00000424011 ENTPD3O75355 529 aa18.8■□□□□ 0.6
CMTM3-202ENST00000424011 NAPAP54920 295 aa18.8■□□□□ 0.6
CMTM3-202ENST00000424011 TPM4P67936 248 aa18.8■□□□□ 0.6
CMTM3-202ENST00000424011 GABPB1Q06547 395 aaPredicted RBP18.8■□□□□ 0.6
CMTM3-202ENST00000424011 TCP10Q12799 353 aa18.8■□□□□ 0.6
CMTM3-202ENST00000424011 PTGDRQ13258 359 aa18.8■□□□□ 0.6
CMTM3-202ENST00000424011 ARL6IP4Q66PJ3 421 aaKnown RBP18.8■□□□□ 0.6
CMTM3-202ENST00000424011 OGFRQ9NZT2 677 aa18.8■□□□□ 0.6
CMTM3-202ENST00000424011 CFAP100Q494V2 611 aa18.8■□□□□ 0.6
CMTM3-202ENST00000424011 GPATCH4Q5T3I0 446 aaKnown RBP18.8■□□□□ 0.6
CMTM3-202ENST00000424011 TYW1BQ6NUM6 668 aa18.79■□□□□ 0.6
CMTM3-202ENST00000424011 ZFPM1Q8IX07 1006 aa18.79■□□□□ 0.6
CMTM3-202ENST00000424011 LRRC47Q8N1G4 583 aaKnown RBP18.79■□□□□ 0.6
CMTM3-202ENST00000424011 HDAC9Q9UKV0 1011 aa18.79■□□□□ 0.6
CMTM3-202ENST00000424011 PCDHA6Q9UN73 950 aa18.79■□□□□ 0.6
CMTM3-202ENST00000424011 PCDHA8Q9Y5H6 950 aa18.79■□□□□ 0.6
CMTM3-202ENST00000424011 ADAMTSL1Q8N6G6 1762 aa18.79■□□□□ 0.6
CMTM3-202ENST00000424011 SMTNL1A8MU46 457 aa18.79■□□□□ 0.6
CMTM3-202ENST00000424011 CACNB3P54284 484 aa18.79■□□□□ 0.6
CMTM3-202ENST00000424011 NCAPHQ15003 741 aa18.79■□□□□ 0.6
CMTM3-202ENST00000424011 CERKLQ49MI3 558 aaPredicted RBP18.79■□□□□ 0.6
CMTM3-202ENST00000424011 NOM1Q5C9Z4 860 aaKnown RBP18.79■□□□□ 0.6
CMTM3-202ENST00000424011 RSBN1LQ6PCB5 846 aaPredicted RBP18.79■□□□□ 0.6
CMTM3-202ENST00000424011 KRT25Q7Z3Z0 450 aa18.79■□□□□ 0.6
CMTM3-202ENST00000424011 HOMER1Q86YM7 354 aa18.79■□□□□ 0.6
CMTM3-202ENST00000424011 TAOK3Q9H2K8 898 aa18.79■□□□□ 0.6
CMTM3-202ENST00000424011 TMOD2Q9NZR1 351 aa18.79■□□□□ 0.6
CMTM3-202ENST00000424011 BCS1LQ9Y276 419 aa18.79■□□□□ 0.6
CMTM3-202ENST00000424011 BRCA1P38398 1863 aaKnown RBP18.79■□□□□ 0.6
CMTM3-202ENST00000424011 ESYT2A0FGR8 921 aa18.78■□□□□ 0.6
CMTM3-202ENST00000424011 FOXN1O15353 648 aa18.78■□□□□ 0.6
CMTM3-202ENST00000424011 MCM7P33993 719 aa18.78■□□□□ 0.6
CMTM3-202ENST00000424011 EIF6P56537 245 aaKnown RBP18.78■□□□□ 0.6
CMTM3-202ENST00000424011 POSTNQ15063 836 aa18.78■□□□□ 0.6
CMTM3-202ENST00000424011 CACTINQ8WUQ7 758 aaKnown RBP18.78■□□□□ 0.6
CMTM3-202ENST00000424011 KANSL2Q9H9L4 492 aa18.78■□□□□ 0.6
CMTM3-202ENST00000424011 SPON1Q9HCB6 807 aa18.78■□□□□ 0.6
CMTM3-202ENST00000424011 PCDHAC2Q9Y5I4 1007 aa18.78■□□□□ 0.6
CMTM3-202ENST00000424011 COL2A1P02458 1487 aaPredicted RBP18.78■□□□□ 0.6
CMTM3-202ENST00000424011 ATRNL1Q5VV63 1379 aa18.78■□□□□ 0.6
CMTM3-202ENST00000424011 DDTLA6NHG4 134 aaPredicted RBP18.78■□□□□ 0.6
CMTM3-202ENST00000424011 IRX5P78411 483 aaPredicted RBP18.78■□□□□ 0.6
CMTM3-202ENST00000424011 MDM2Q00987 491 aaPredicted RBP18.78■□□□□ 0.6
CMTM3-202ENST00000424011 ZNF543Q08ER8 600 aa18.78■□□□□ 0.6
CMTM3-202ENST00000424011 TATDN1Q6P1N9 297 aa18.78■□□□□ 0.6
CMTM3-202ENST00000424011 PIGSQ96S52 555 aa18.78■□□□□ 0.6
CMTM3-202ENST00000424011 ZNRF3Q9ULT6 936 aa18.78■□□□□ 0.6
CMTM3-202ENST00000424011 ZNF646O15015 1829 aaPredicted RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms