RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 FEM1BQ9UK73 627 aa22.51■■□□□ 1.19
VARS2-202ENST00000421263 PLXNA1Q9UIW2 1896 aa22.5■■□□□ 1.19
VARS2-202ENST00000421263 DNAJC25-GNG10A0A024R161 153 aa22.5■■□□□ 1.19
VARS2-202ENST00000421263 KBTBD13C9JR72 458 aa22.5■■□□□ 1.19
VARS2-202ENST00000421263 SLC3A2P08195 630 aaKnown RBP22.5■■□□□ 1.19
VARS2-202ENST00000421263 TFAP4Q01664 338 aa22.5■■□□□ 1.19
VARS2-202ENST00000421263 SNRNP48Q6IEG0 339 aaKnown RBP22.5■■□□□ 1.19
VARS2-202ENST00000421263 MSL3Q8N5Y2 521 aaKnown RBP22.5■■□□□ 1.19
VARS2-202ENST00000421263 ZBED4O75132 1171 aa22.49■■□□□ 1.19
VARS2-202ENST00000421263 ZNF865P0CJ78 1059 aaPredicted RBP22.49■■□□□ 1.19
VARS2-202ENST00000421263 TSPY3P0CV98 308 aa22.49■■□□□ 1.19
VARS2-202ENST00000421263 TSPY8P0CW00 308 aa22.49■■□□□ 1.19
VARS2-202ENST00000421263 TAL1P17542 331 aaPredicted RBP22.49■■□□□ 1.19
VARS2-202ENST00000421263 RTP1P59025 263 aa22.49■■□□□ 1.19
VARS2-202ENST00000421263 MDM2Q00987 491 aaPredicted RBP22.49■■□□□ 1.19
VARS2-202ENST00000421263 SNX17Q15036 470 aa22.49■■□□□ 1.19
VARS2-202ENST00000421263 FAM47AQ5JRC9 791 aa22.49■■□□□ 1.19
VARS2-202ENST00000421263 C1orf53Q5VUE5 145 aa22.49■■□□□ 1.19
VARS2-202ENST00000421263 EVI5LQ96CN4 794 aa22.49■■□□□ 1.19
VARS2-202ENST00000421263 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.49■■□□□ 1.19
VARS2-202ENST00000421263 OAZ1P54368 228 aa22.48■■□□□ 1.19
VARS2-202ENST00000421263 PDE1AP54750 535 aa22.48■■□□□ 1.19
VARS2-202ENST00000421263 SLFN13Q68D06 897 aa22.48■■□□□ 1.19
VARS2-202ENST00000421263 MAMDC4Q6UXC1 1216 aa22.48■■□□□ 1.19
VARS2-202ENST00000421263 CCDC129Q6ZRS4 1044 aa22.48■■□□□ 1.19
VARS2-202ENST00000421263 FDX1P10109 184 aa22.47■■□□□ 1.19
VARS2-202ENST00000421263 ADCYAP1R1P41586 468 aa22.47■■□□□ 1.19
VARS2-202ENST00000421263 ZNF467Q7Z7K2 595 aaPredicted RBP22.47■■□□□ 1.19
VARS2-202ENST00000421263 TICAM2Q86XR7 235 aa22.47■■□□□ 1.19
VARS2-202ENST00000421263 CPXCR1Q8N123 301 aa22.47■■□□□ 1.19
VARS2-202ENST00000421263 LRRC47Q8N1G4 583 aaKnown RBP22.47■■□□□ 1.19
VARS2-202ENST00000421263 KIFC2Q96AC6 838 aa22.47■■□□□ 1.19
VARS2-202ENST00000421263 RAVER2Q9HCJ3 691 aaKnown RBP22.47■■□□□ 1.19
VARS2-202ENST00000421263 ANAPC4Q9UJX5 808 aa22.47■■□□□ 1.19
VARS2-202ENST00000421263 SNAI1O95863 264 aaPredicted RBP22.46■■□□□ 1.19
VARS2-202ENST00000421263 RARBP10826 455 aa22.46■■□□□ 1.19
VARS2-202ENST00000421263 BMP3P12645 472 aa22.46■■□□□ 1.19
VARS2-202ENST00000421263 ALX1Q15699 326 aa22.46■■□□□ 1.19
VARS2-202ENST00000421263 DDX11Q96FC9 970 aa22.46■■□□□ 1.19
VARS2-202ENST00000421263 XPNPEP3Q9NQH7 507 aa22.46■■□□□ 1.19
VARS2-202ENST00000421263 ZBTB47Q9UFB7 747 aaPredicted RBP22.46■■□□□ 1.19
VARS2-202ENST00000421263 PHF24Q9UPV7 400 aa22.46■■□□□ 1.19
VARS2-202ENST00000421263 TACC3Q9Y6A5 838 aa22.46■■□□□ 1.19
VARS2-202ENST00000421263 SYNGAP1Q96PV0 1343 aa22.46■■□□□ 1.19
VARS2-202ENST00000421263 FGRP09769 529 aa22.45■■□□□ 1.18
VARS2-202ENST00000421263 AKR1A1P14550 325 aa22.45■■□□□ 1.18
VARS2-202ENST00000421263 NOVP48745 357 aa22.45■■□□□ 1.18
VARS2-202ENST00000421263 VPS53Q5VIR6 699 aa22.45■■□□□ 1.18
VARS2-202ENST00000421263 CHST13Q8NET6 341 aa22.45■■□□□ 1.18
VARS2-202ENST00000421263 GMCL1Q96IK5 515 aa22.45■■□□□ 1.18
VARS2-202ENST00000421263 INCENPQ9NQS7 918 aa22.45■■□□□ 1.18
VARS2-202ENST00000421263 IL17RBQ9NRM6 502 aa22.45■■□□□ 1.18
VARS2-202ENST00000421263 HELLSQ9NRZ9 838 aa22.45■■□□□ 1.18
VARS2-202ENST00000421263 FBXO40Q9UH90 709 aa22.45■■□□□ 1.18
VARS2-202ENST00000421263 ATP11BQ9Y2G3 1177 aa22.45■■□□□ 1.18
VARS2-202ENST00000421263 TMEM232C9JQI7 657 aa22.44■■□□□ 1.18
VARS2-202ENST00000421263 PLA2G6O60733 806 aa22.44■■□□□ 1.18
VARS2-202ENST00000421263 CTDSPL2Q05D32 466 aa22.44■■□□□ 1.18
VARS2-202ENST00000421263 AAMPQ13685 434 aa22.44■■□□□ 1.18
VARS2-202ENST00000421263 PPP4R3BQ5MIZ7 849 aa22.44■■□□□ 1.18
VARS2-202ENST00000421263 RNF180Q86T96 592 aa22.44■■□□□ 1.18
VARS2-202ENST00000421263 LBHD1Q9BQE6 289 aaPredicted RBP22.44■■□□□ 1.18
VARS2-202ENST00000421263 CNPY2Q9Y2B0 182 aa22.44■■□□□ 1.18
VARS2-202ENST00000421263 CTDP1Q9Y5B0 961 aaPredicted RBP22.44■■□□□ 1.18
VARS2-202ENST00000421263 ADAMTS4O75173 837 aa22.43■■□□□ 1.18
VARS2-202ENST00000421263 PGK1P00558 417 aa22.43■■□□□ 1.18
VARS2-202ENST00000421263 MYCNP04198 464 aaPredicted RBP22.43■■□□□ 1.18
VARS2-202ENST00000421263 TRIM60Q495X7 471 aa22.43■■□□□ 1.18
VARS2-202ENST00000421263 FAM160B2Q86V87 743 aa22.43■■□□□ 1.18
VARS2-202ENST00000421263 CHURC1Q8WUH1 139 aa22.43■■□□□ 1.18
VARS2-202ENST00000421263 STAG1Q8WVM7 1258 aa22.43■■□□□ 1.18
VARS2-202ENST00000421263 FERMT2Q96AC1 680 aa22.43■■□□□ 1.18
VARS2-202ENST00000421263 FGD4Q96M96 766 aa22.43■■□□□ 1.18
VARS2-202ENST00000421263 PRKAG2Q9UGJ0 569 aa22.43■■□□□ 1.18
VARS2-202ENST00000421263 SLC4A3P48751 1232 aa22.42■■□□□ 1.18
VARS2-202ENST00000421263 STAT2P52630 851 aa22.42■■□□□ 1.18
VARS2-202ENST00000421263 FAM184BQ9ULE4 1060 aa22.42■■□□□ 1.18
VARS2-202ENST00000421263 ZNF536O15090 1300 aa22.41■■□□□ 1.18
VARS2-202ENST00000421263 TSPY2A6NKD2 308 aa22.41■■□□□ 1.18
VARS2-202ENST00000421263 ORC4O43929 436 aa22.41■■□□□ 1.18
VARS2-202ENST00000421263 MCCP23508 829 aa22.41■■□□□ 1.18
VARS2-202ENST00000421263 SLC1A4P43007 532 aa22.41■■□□□ 1.18
VARS2-202ENST00000421263 RCSD1Q6JBY9 416 aa22.41■■□□□ 1.18
VARS2-202ENST00000421263 ANKRD35Q8N283 1001 aa22.41■■□□□ 1.18
VARS2-202ENST00000421263 KLHDC9Q8NEP7 349 aa22.41■■□□□ 1.18
VARS2-202ENST00000421263 TSEN34Q9BSV6 310 aaKnown RBP22.41■■□□□ 1.18
VARS2-202ENST00000421263 LTBP2Q14767 1821 aa22.41■■□□□ 1.18
VARS2-202ENST00000421263 COL6A3P12111 3177 aa22.4■■□□□ 1.18
VARS2-202ENST00000421263 NMT2O60551 498 aa22.4■■□□□ 1.18
VARS2-202ENST00000421263 FGAP02671 866 aa22.4■■□□□ 1.18
VARS2-202ENST00000421263 MCMDC2Q4G0Z9 681 aa22.4■■□□□ 1.18
VARS2-202ENST00000421263 CCSAPQ6IQ19 270 aaPredicted RBP22.4■■□□□ 1.18
VARS2-202ENST00000421263 SMC5Q8IY18 1101 aa22.4■■□□□ 1.18
VARS2-202ENST00000421263 FAM227BQ96M60 508 aa22.4■■□□□ 1.18
VARS2-202ENST00000421263 PDLIM7Q9NR12 457 aa22.4■■□□□ 1.18
VARS2-202ENST00000421263 STX8Q9UNK0 236 aa22.4■■□□□ 1.18
VARS2-202ENST00000421263 A0A0D9SFI3 127 aa22.39■■□□□ 1.17
VARS2-202ENST00000421263 DUSP11O75319 330 aaKnown RBP22.39■■□□□ 1.17
VARS2-202ENST00000421263 TLE2Q04725 743 aa22.39■■□□□ 1.17
VARS2-202ENST00000421263 ACVR2BQ13705 512 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms