RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 REV3LO60673 3130 aa17.14■□□□□ 0.33
NFE4-201ENST00000420058 MYADML2A6NDP7 307 aa17.14■□□□□ 0.33
NFE4-201ENST00000420058 ADCY6O43306 1168 aa17.14■□□□□ 0.33
NFE4-201ENST00000420058 IFIT2P09913 472 aaKnown RBP17.14■□□□□ 0.33
NFE4-201ENST00000420058 CDK7P50613 346 aa17.14■□□□□ 0.33
NFE4-201ENST00000420058 FPGSQ05932 587 aa17.14■□□□□ 0.33
NFE4-201ENST00000420058 UBE3CQ15386 1083 aa17.14■□□□□ 0.33
NFE4-201ENST00000420058 KCNA10Q16322 511 aa17.14■□□□□ 0.33
NFE4-201ENST00000420058 MAMDC4Q6UXC1 1216 aa17.14■□□□□ 0.33
NFE4-201ENST00000420058 FGD4Q96M96 766 aa17.14■□□□□ 0.33
NFE4-201ENST00000420058 NUP88Q99567 741 aaPredicted RBP17.14■□□□□ 0.33
NFE4-201ENST00000420058 PUS7LQ9H0K6 701 aaKnown RBP17.14■□□□□ 0.33
NFE4-201ENST00000420058 TBX21Q9UL17 535 aa17.14■□□□□ 0.33
NFE4-201ENST00000420058 SYNRGQ9UMZ2 1314 aa17.14■□□□□ 0.33
NFE4-201ENST00000420058 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.13■□□□□ 0.33
NFE4-201ENST00000420058 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.13■□□□□ 0.33
NFE4-201ENST00000420058 TIMP1P01033 207 aa17.13■□□□□ 0.33
NFE4-201ENST00000420058 DNAJB2P25686 324 aa17.13■□□□□ 0.33
NFE4-201ENST00000420058 RPAP2Q8IXW5 612 aaPredicted RBP17.13■□□□□ 0.33
NFE4-201ENST00000420058 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.13■□□□□ 0.33
NFE4-201ENST00000420058 ZBTB40Q9NUA8 1239 aa17.13■□□□□ 0.33
NFE4-201ENST00000420058 PLXNA1Q9UIW2 1896 aa17.12■□□□□ 0.33
NFE4-201ENST00000420058 RASIP1Q5U651 963 aa17.12■□□□□ 0.33
NFE4-201ENST00000420058 MSL3Q8N5Y2 521 aaKnown RBP17.12■□□□□ 0.33
NFE4-201ENST00000420058 GOPCQ9HD26 462 aa17.12■□□□□ 0.33
NFE4-201ENST00000420058 STARD7Q9NQZ5 370 aa17.12■□□□□ 0.33
NFE4-201ENST00000420058 FAM184BQ9ULE4 1060 aa17.12■□□□□ 0.33
NFE4-201ENST00000420058 CNPY2Q9Y2B0 182 aa17.12■□□□□ 0.33
NFE4-201ENST00000420058 SLC4A4Q9Y6R1 1079 aa17.12■□□□□ 0.33
NFE4-201ENST00000420058 MOXD2PA6NHM9 499 aa17.11■□□□□ 0.33
NFE4-201ENST00000420058 F5H6K3 240 aa17.11■□□□□ 0.33
NFE4-201ENST00000420058 ATP2A1O14983 1001 aa17.11■□□□□ 0.33
NFE4-201ENST00000420058 CTAGE5O15320 804 aa17.11■□□□□ 0.33
NFE4-201ENST00000420058 RAB11FIP3O75154 756 aa17.11■□□□□ 0.33
NFE4-201ENST00000420058 DUSP11O75319 330 aaKnown RBP17.11■□□□□ 0.33
NFE4-201ENST00000420058 RASA1P20936 1047 aa17.11■□□□□ 0.33
NFE4-201ENST00000420058 COPB2P35606 906 aa17.11■□□□□ 0.33
NFE4-201ENST00000420058 KLRC3Q07444 240 aa17.11■□□□□ 0.33
NFE4-201ENST00000420058 TMEM240Q5SV17 173 aa17.11■□□□□ 0.33
NFE4-201ENST00000420058 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.11■□□□□ 0.33
NFE4-201ENST00000420058 STRBPQ96SI9 672 aaKnown RBP17.11■□□□□ 0.33
NFE4-201ENST00000420058 SLF1Q9BQI6 1058 aa17.11■□□□□ 0.33
NFE4-201ENST00000420058 TEX13BQ9BXU2 312 aa17.11■□□□□ 0.33
NFE4-201ENST00000420058 BCL11AQ9H165 835 aa17.11■□□□□ 0.33
NFE4-201ENST00000420058 ZNF576Q9H609 170 aa17.11■□□□□ 0.33
NFE4-201ENST00000420058 XIRP2A4UGR9 3374 aa17.11■□□□□ 0.33
NFE4-201ENST00000420058 SYNGAP1Q96PV0 1343 aa17.11■□□□□ 0.33
NFE4-201ENST00000420058 MYH8P13535 1937 aa17.11■□□□□ 0.33
NFE4-201ENST00000420058 IGKV6D-41A0A0C4DH26 115 aa17.1■□□□□ 0.33
NFE4-201ENST00000420058 GRXCR1A8MXD5 290 aa17.1■□□□□ 0.33
NFE4-201ENST00000420058 DCDC2CA8MYV0 355 aa17.1■□□□□ 0.33
NFE4-201ENST00000420058 NDUFB10O96000 172 aa17.1■□□□□ 0.33
NFE4-201ENST00000420058 CST5P28325 142 aaPredicted RBP17.1■□□□□ 0.33
NFE4-201ENST00000420058 PBX2P40425 430 aa17.1■□□□□ 0.33
NFE4-201ENST00000420058 SBK1Q52WX2 424 aa17.1■□□□□ 0.33
NFE4-201ENST00000420058 SNRNP48Q6IEG0 339 aaKnown RBP17.1■□□□□ 0.33
NFE4-201ENST00000420058 MFSD5Q6N075 450 aa17.1■□□□□ 0.33
NFE4-201ENST00000420058 KATNBL1Q9H079 304 aa17.1■□□□□ 0.33
NFE4-201ENST00000420058 NYAP2Q9P242 653 aa17.1■□□□□ 0.33
NFE4-201ENST00000420058 ELP1O95163 1332 aa17.1■□□□□ 0.33
NFE4-201ENST00000420058 TRANK1O15050 2925 aa17.1■□□□□ 0.33
NFE4-201ENST00000420058 GREB1LQ9C091 1923 aaPredicted RBP17.09■□□□□ 0.33
NFE4-201ENST00000420058 GSG1L2A8MUP6 293 aa17.09■□□□□ 0.33
NFE4-201ENST00000420058 HNRNPUQ00839 825 aaKnown RBP eCLIP17.09■□□□□ 0.33
NFE4-201ENST00000420058 ACVR2BQ13705 512 aa17.09■□□□□ 0.33
NFE4-201ENST00000420058 ZNF467Q7Z7K2 595 aaPredicted RBP17.09■□□□□ 0.33
NFE4-201ENST00000420058 PRPF38AQ8NAV1 312 aaKnown RBP17.09■□□□□ 0.33
NFE4-201ENST00000420058 NUP133Q8WUM0 1156 aa17.09■□□□□ 0.33
NFE4-201ENST00000420058 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.09■□□□□ 0.33
NFE4-201ENST00000420058 UPF3AQ9H1J1 476 aaKnown RBP17.09■□□□□ 0.33
NFE4-201ENST00000420058 RNF216Q9NWF9 866 aaPredicted RBP17.09■□□□□ 0.33
NFE4-201ENST00000420058 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.09■□□□□ 0.33
NFE4-201ENST00000420058 RAD21O60216 631 aa17.08■□□□□ 0.32
NFE4-201ENST00000420058 ASGR1P07306 291 aa17.08■□□□□ 0.32
NFE4-201ENST00000420058 GJA9P57773 515 aa17.08■□□□□ 0.32
NFE4-201ENST00000420058 NKX3-2P78367 333 aa17.08■□□□□ 0.32
NFE4-201ENST00000420058 SYMPKQ92797 1274 aaKnown RBP17.08■□□□□ 0.32
NFE4-201ENST00000420058 MKL1Q969V6 931 aa17.08■□□□□ 0.32
NFE4-201ENST00000420058 TIFAQ96CG3 184 aa17.08■□□□□ 0.32
NFE4-201ENST00000420058 DDX11Q96FC9 970 aa17.08■□□□□ 0.32
NFE4-201ENST00000420058 PBX4Q9BYU1 374 aa17.08■□□□□ 0.32
NFE4-201ENST00000420058 SLC38A10Q9HBR0 1119 aa17.08■□□□□ 0.32
NFE4-201ENST00000420058 ZHX1Q9UKY1 873 aaPredicted RBP17.08■□□□□ 0.32
NFE4-201ENST00000420058 ARVCFO00192 962 aa17.07■□□□□ 0.32
NFE4-201ENST00000420058 CSF2RAP15509 400 aa17.07■□□□□ 0.32
NFE4-201ENST00000420058 CCDC144BQ3MJ40 725 aa17.07■□□□□ 0.32
NFE4-201ENST00000420058 TJAP1Q5JTD0 557 aa17.07■□□□□ 0.32
NFE4-201ENST00000420058 FAM126BQ8IXS8 530 aa17.07■□□□□ 0.32
NFE4-201ENST00000420058 AMOTL1Q8IY63 956 aa17.07■□□□□ 0.32
NFE4-201ENST00000420058 CPXCR1Q8N123 301 aa17.07■□□□□ 0.32
NFE4-201ENST00000420058 STK11IPQ8N1F8 1099 aa17.07■□□□□ 0.32
NFE4-201ENST00000420058 OSBP2Q969R2 916 aa17.07■□□□□ 0.32
NFE4-201ENST00000420058 RAVER2Q9HCJ3 691 aaKnown RBP17.07■□□□□ 0.32
NFE4-201ENST00000420058 COG6Q9Y2V7 657 aa17.07■□□□□ 0.32
NFE4-201ENST00000420058 ASTN1O14525 1302 aa17.06■□□□□ 0.32
NFE4-201ENST00000420058 HMMRO75330 724 aa17.06■□□□□ 0.32
NFE4-201ENST00000420058 CD4P01730 458 aa17.06■□□□□ 0.32
NFE4-201ENST00000420058 C6orf222P0C671 652 aaPredicted RBP17.06■□□□□ 0.32
NFE4-201ENST00000420058 ACRP10323 421 aa17.06■□□□□ 0.32
NFE4-201ENST00000420058 ADGRE1Q14246 886 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms