RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 COPB2P35606 906 aa12.32□□□□□ -0.44
TNFAIP3-202ENST00000420009 CCSAPQ6IQ19 270 aaPredicted RBP12.32□□□□□ -0.44
TNFAIP3-202ENST00000420009 FTSJ3Q8IY81 847 aaKnown RBP12.32□□□□□ -0.44
TNFAIP3-202ENST00000420009 MSL3Q8N5Y2 521 aaKnown RBP12.32□□□□□ -0.44
TNFAIP3-202ENST00000420009 KLHDC9Q8NEP7 349 aa12.32□□□□□ -0.44
TNFAIP3-202ENST00000420009 TIFAQ96CG3 184 aa12.32□□□□□ -0.44
TNFAIP3-202ENST00000420009 ZNF576Q9H609 170 aa12.32□□□□□ -0.44
TNFAIP3-202ENST00000420009 ARMT1Q9H993 441 aa12.32□□□□□ -0.44
TNFAIP3-202ENST00000420009 IL1RAPL2Q9NP60 686 aa12.32□□□□□ -0.44
TNFAIP3-202ENST00000420009 STARD7Q9NQZ5 370 aa12.32□□□□□ -0.44
TNFAIP3-202ENST00000420009 ATP8A2Q9NTI2 1148 aa12.32□□□□□ -0.44
TNFAIP3-202ENST00000420009 CNPY2Q9Y2B0 182 aa12.32□□□□□ -0.44
TNFAIP3-202ENST00000420009 MYH8P13535 1937 aa12.32□□□□□ -0.44
TNFAIP3-202ENST00000420009 DCDC2CA8MYV0 355 aa12.31□□□□□ -0.44
TNFAIP3-202ENST00000420009 TNFRSF10AO00220 468 aa12.31□□□□□ -0.44
TNFAIP3-202ENST00000420009 GOLIM4O00461 696 aa12.31□□□□□ -0.44
TNFAIP3-202ENST00000420009 PRKAB2O43741 272 aa12.31□□□□□ -0.44
TNFAIP3-202ENST00000420009 TIMP1P01033 207 aa12.31□□□□□ -0.44
TNFAIP3-202ENST00000420009 EEF2P13639 858 aaKnown RBP12.31□□□□□ -0.44
TNFAIP3-202ENST00000420009 CST5P28325 142 aaPredicted RBP12.31□□□□□ -0.44
TNFAIP3-202ENST00000420009 STAT3P40763 770 aa12.31□□□□□ -0.44
TNFAIP3-202ENST00000420009 C12orf60Q5U649 245 aa12.31□□□□□ -0.44
TNFAIP3-202ENST00000420009 RASIP1Q5U651 963 aa12.31□□□□□ -0.44
TNFAIP3-202ENST00000420009 C16orf86Q6ZW13 317 aa12.31□□□□□ -0.44
TNFAIP3-202ENST00000420009 RHPN1Q8TCX5 695 aa12.31□□□□□ -0.44
TNFAIP3-202ENST00000420009 NUP133Q8WUM0 1156 aa12.31□□□□□ -0.44
TNFAIP3-202ENST00000420009 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.31□□□□□ -0.441e-8■■■□□ 14.9
TNFAIP3-202ENST00000420009 ZBED9Q6R2W3 1325 aa12.31□□□□□ -0.44
TNFAIP3-202ENST00000420009 SYNGAP1Q96PV0 1343 aa12.31□□□□□ -0.44
TNFAIP3-202ENST00000420009 CHD9Q3L8U1 2897 aa12.31□□□□□ -0.44
TNFAIP3-202ENST00000420009 ZNFX1Q9P2E3 1918 aaKnown RBP12.31□□□□□ -0.44
TNFAIP3-202ENST00000420009 XIRP2A4UGR9 3374 aa12.3□□□□□ -0.44
TNFAIP3-202ENST00000420009 DNAJC25-GNG10A0A024R161 153 aa12.3□□□□□ -0.44
TNFAIP3-202ENST00000420009 CYP2D7A0A087X1C5 515 aa12.3□□□□□ -0.44
TNFAIP3-202ENST00000420009 MYADML2A6NDP7 307 aa12.3□□□□□ -0.44
TNFAIP3-202ENST00000420009 CCER2I3L3R5 266 aa12.3□□□□□ -0.44
TNFAIP3-202ENST00000420009 MBD4O95243 580 aa12.3□□□□□ -0.44
TNFAIP3-202ENST00000420009 SNAI1O95863 264 aaPredicted RBP12.3□□□□□ -0.44
TNFAIP3-202ENST00000420009 ADD2P35612 726 aa12.3□□□□□ -0.44
TNFAIP3-202ENST00000420009 CDK8P49336 464 aa12.3□□□□□ -0.44
TNFAIP3-202ENST00000420009 MFSD5Q6N075 450 aa12.3□□□□□ -0.44
TNFAIP3-202ENST00000420009 MAMDC4Q6UXC1 1216 aa12.3□□□□□ -0.44
TNFAIP3-202ENST00000420009 C16orf59Q7L2K0 433 aa12.3□□□□□ -0.44
TNFAIP3-202ENST00000420009 DNAJC2Q99543 621 aaKnown RBP12.3□□□□□ -0.44
TNFAIP3-202ENST00000420009 TEX13BQ9BXU2 312 aa12.3□□□□□ -0.44
TNFAIP3-202ENST00000420009 KANSL2Q9H9L4 492 aa12.3□□□□□ -0.44
TNFAIP3-202ENST00000420009 GREB1LQ9C091 1923 aaPredicted RBP12.3□□□□□ -0.44
TNFAIP3-202ENST00000420009 ELP1O95163 1332 aa12.3□□□□□ -0.44
TNFAIP3-202ENST00000420009 MROH7Q68CQ1 1323 aa12.3□□□□□ -0.44
TNFAIP3-202ENST00000420009 BAZ2AQ9UIF9 1905 aaKnown RBP12.29□□□□□ -0.44
TNFAIP3-202ENST00000420009 DUSP11O75319 330 aaKnown RBP12.29□□□□□ -0.44
TNFAIP3-202ENST00000420009 PBX2P40425 430 aa12.29□□□□□ -0.44
TNFAIP3-202ENST00000420009 CDK7P50613 346 aa12.29□□□□□ -0.44
TNFAIP3-202ENST00000420009 PPIGQ13427 754 aaKnown RBP eCLIP12.29□□□□□ -0.44
TNFAIP3-202ENST00000420009 KCNA10Q16322 511 aa12.29□□□□□ -0.44
TNFAIP3-202ENST00000420009 SLFNL1Q499Z3 407 aa12.29□□□□□ -0.44
TNFAIP3-202ENST00000420009 HSP90AB4PQ58FF6 505 aa12.29□□□□□ -0.44
TNFAIP3-202ENST00000420009 TMEM240Q5SV17 173 aa12.29□□□□□ -0.44
TNFAIP3-202ENST00000420009 FAM83BQ5T0W9 1011 aa12.29□□□□□ -0.44
TNFAIP3-202ENST00000420009 AKNAD1Q5T1N1 836 aa12.29□□□□□ -0.44
TNFAIP3-202ENST00000420009 ZNF467Q7Z7K2 595 aaPredicted RBP12.29□□□□□ -0.44
TNFAIP3-202ENST00000420009 ATXN2LQ8WWM7 1075 aaKnown RBP12.29□□□□□ -0.44
TNFAIP3-202ENST00000420009 KIF12Q96FN5 646 aa12.29□□□□□ -0.44
TNFAIP3-202ENST00000420009 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.29□□□□□ -0.44
TNFAIP3-202ENST00000420009 PBX4Q9BYU1 374 aa12.29□□□□□ -0.44
TNFAIP3-202ENST00000420009 GOPCQ9HD26 462 aa12.29□□□□□ -0.44
TNFAIP3-202ENST00000420009 FAM184BQ9ULE4 1060 aa12.29□□□□□ -0.44
TNFAIP3-202ENST00000420009 CHD7Q9P2D1 2997 aa12.28□□□□□ -0.44
TNFAIP3-202ENST00000420009 USP17L12C9JPN9 530 aa12.28□□□□□ -0.44
TNFAIP3-202ENST00000420009 USP17L21D6R901 530 aa12.28□□□□□ -0.44
TNFAIP3-202ENST00000420009 ADCY6O43306 1168 aa12.28□□□□□ -0.44
TNFAIP3-202ENST00000420009 COL9A1P20849 921 aa12.28□□□□□ -0.44
TNFAIP3-202ENST00000420009 IRX5P78411 483 aaPredicted RBP12.28□□□□□ -0.44
TNFAIP3-202ENST00000420009 CCDC174Q6PII3 467 aa12.28□□□□□ -0.44
TNFAIP3-202ENST00000420009 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.28□□□□□ -0.44
TNFAIP3-202ENST00000420009 CLASRPQ8N2M8 674 aaKnown RBP12.28□□□□□ -0.44
TNFAIP3-202ENST00000420009 FGD4Q96M96 766 aa12.28□□□□□ -0.44
TNFAIP3-202ENST00000420009 GLT1D1Q96MS3 346 aa12.28□□□□□ -0.44
TNFAIP3-202ENST00000420009 UPF3AQ9H1J1 476 aaKnown RBP12.28□□□□□ -0.44
TNFAIP3-202ENST00000420009 ZHX1Q9UKY1 873 aaPredicted RBP12.28□□□□□ -0.44
TNFAIP3-202ENST00000420009 RIPK3Q9Y572 518 aa12.28□□□□□ -0.44
TNFAIP3-202ENST00000420009 GRXCR1A8MXD5 290 aa12.27□□□□□ -0.45
TNFAIP3-202ENST00000420009 ATP2A1O14983 1001 aa12.27□□□□□ -0.45
TNFAIP3-202ENST00000420009 CHGBP05060 677 aa12.27□□□□□ -0.45
TNFAIP3-202ENST00000420009 ASGR1P07306 291 aa12.27□□□□□ -0.45
TNFAIP3-202ENST00000420009 CSF2RAP15509 400 aa12.27□□□□□ -0.45
TNFAIP3-202ENST00000420009 ADGRE1Q14246 886 aa12.27□□□□□ -0.45
TNFAIP3-202ENST00000420009 SNRNP48Q6IEG0 339 aaKnown RBP12.27□□□□□ -0.45
TNFAIP3-202ENST00000420009 PSRC1Q6PGN9 363 aaPredicted RBP12.27□□□□□ -0.45
TNFAIP3-202ENST00000420009 FAM126BQ8IXS8 530 aa12.27□□□□□ -0.45
TNFAIP3-202ENST00000420009 AMOTL1Q8IY63 956 aa12.27□□□□□ -0.45
TNFAIP3-202ENST00000420009 KIF1BPQ96EK5 621 aa12.27□□□□□ -0.45
TNFAIP3-202ENST00000420009 ASB2Q96Q27 587 aa12.27□□□□□ -0.45
TNFAIP3-202ENST00000420009 GAS2L1Q99501 681 aaPredicted RBP12.27□□□□□ -0.45
TNFAIP3-202ENST00000420009 NUP88Q99567 741 aaPredicted RBP12.27□□□□□ -0.45
TNFAIP3-202ENST00000420009 SLF1Q9BQI6 1058 aa12.27□□□□□ -0.45
TNFAIP3-202ENST00000420009 TSPYL2Q9H2G4 693 aaPredicted RBP12.27□□□□□ -0.45
TNFAIP3-202ENST00000420009 PRDM12Q9H4Q4 367 aa12.27□□□□□ -0.45
TNFAIP3-202ENST00000420009 BMP2KQ9NSY1 1161 aaPredicted RBP12.27□□□□□ -0.45
TNFAIP3-202ENST00000420009 PAG1Q9NWQ8 432 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms