RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 ZMYM1Q5SVZ6 1142 aa20.59■□□□□ 0.89
PTCD1-202ENST00000419981 DEFB123Q8N688 67 aa20.59■□□□□ 0.89
PTCD1-202ENST00000419981 MKL1Q969V6 931 aa20.59■□□□□ 0.89
PTCD1-202ENST00000419981 NAPBQ9H115 298 aa20.59■□□□□ 0.89
PTCD1-202ENST00000419981 XPNPEP3Q9NQH7 507 aa20.59■□□□□ 0.89
PTCD1-202ENST00000419981 MTMR4Q9NYA4 1195 aa20.59■□□□□ 0.89
PTCD1-202ENST00000419981 ATP2A1O14983 1001 aa20.58■□□□□ 0.89
PTCD1-202ENST00000419981 ZBED4O75132 1171 aa20.58■□□□□ 0.89
PTCD1-202ENST00000419981 TSPY3P0CV98 308 aa20.58■□□□□ 0.89
PTCD1-202ENST00000419981 TSPY8P0CW00 308 aa20.58■□□□□ 0.89
PTCD1-202ENST00000419981 ADCYAP1R1P41586 468 aa20.58■□□□□ 0.89
PTCD1-202ENST00000419981 SNX17Q15036 470 aa20.58■□□□□ 0.89
PTCD1-202ENST00000419981 CPXCR1Q8N123 301 aa20.58■□□□□ 0.89
PTCD1-202ENST00000419981 LRRC47Q8N1G4 583 aaKnown RBP20.58■□□□□ 0.89
PTCD1-202ENST00000419981 FERMT2Q96AC1 680 aa20.58■□□□□ 0.89
PTCD1-202ENST00000419981 DDX11Q96FC9 970 aa20.58■□□□□ 0.89
PTCD1-202ENST00000419981 CNPY2Q9Y2B0 182 aa20.58■□□□□ 0.89
PTCD1-202ENST00000419981 AKR1A1P14550 325 aa20.57■□□□□ 0.88
PTCD1-202ENST00000419981 TAL1P17542 331 aaPredicted RBP20.57■□□□□ 0.88
PTCD1-202ENST00000419981 SLC4A3P48751 1232 aa20.57■□□□□ 0.88
PTCD1-202ENST00000419981 RRP1P56182 461 aaKnown RBP20.57■□□□□ 0.88
PTCD1-202ENST00000419981 PPARAQ07869 468 aa20.57■□□□□ 0.88
PTCD1-202ENST00000419981 TRIM60Q495X7 471 aa20.57■□□□□ 0.88
PTCD1-202ENST00000419981 Q7L0L9 218 aa20.57■□□□□ 0.88
PTCD1-202ENST00000419981 RNF180Q86T96 592 aa20.57■□□□□ 0.88
PTCD1-202ENST00000419981 MSL3Q8N5Y2 521 aaKnown RBP20.57■□□□□ 0.88
PTCD1-202ENST00000419981 GMCL1P1Q8NEA9 526 aa20.57■□□□□ 0.88
PTCD1-202ENST00000419981 NEDD1Q8NHV4 660 aa20.57■□□□□ 0.88
PTCD1-202ENST00000419981 KIFC2Q96AC6 838 aa20.57■□□□□ 0.88
PTCD1-202ENST00000419981 PRDM5Q9NQX1 630 aaPredicted RBP20.57■□□□□ 0.88
PTCD1-202ENST00000419981 ZBTB47Q9UFB7 747 aaPredicted RBP20.57■□□□□ 0.88
PTCD1-202ENST00000419981 FEM1BQ9UK73 627 aa20.57■□□□□ 0.88
PTCD1-202ENST00000419981 RIPK3Q9Y572 518 aa20.57■□□□□ 0.88
PTCD1-202ENST00000419981 SYNGAP1Q96PV0 1343 aa20.56■□□□□ 0.88
PTCD1-202ENST00000419981 ZNF865P0CJ78 1059 aaPredicted RBP20.56■□□□□ 0.88
PTCD1-202ENST00000419981 C1orf53Q5VUE5 145 aa20.56■□□□□ 0.88
PTCD1-202ENST00000419981 SLC38A10Q9HBR0 1119 aa20.56■□□□□ 0.88
PTCD1-202ENST00000419981 PHF24Q9UPV7 400 aa20.56■□□□□ 0.88
PTCD1-202ENST00000419981 SALL3Q9BXA9 1300 aa20.55■□□□□ 0.88
PTCD1-202ENST00000419981 LAMA4Q16363 1823 aa20.55■□□□□ 0.88
PTCD1-202ENST00000419981 MYH6P13533 1939 aa20.55■□□□□ 0.88
PTCD1-202ENST00000419981 PGK1P00558 417 aa20.55■□□□□ 0.88
PTCD1-202ENST00000419981 TFAP4Q01664 338 aa20.55■□□□□ 0.88
PTCD1-202ENST00000419981 SLFN13Q68D06 897 aa20.55■□□□□ 0.88
PTCD1-202ENST00000419981 RAVER2Q9HCJ3 691 aaKnown RBP20.55■□□□□ 0.88
PTCD1-202ENST00000419981 COL6A3P12111 3177 aa20.55■□□□□ 0.88
PTCD1-202ENST00000419981 DNAJC25-GNG10A0A024R161 153 aa20.54■□□□□ 0.88
PTCD1-202ENST00000419981 BMP3P12645 472 aa20.54■□□□□ 0.88
PTCD1-202ENST00000419981 OAZ1P54368 228 aa20.54■□□□□ 0.88
PTCD1-202ENST00000419981 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.54■□□□□ 0.88
PTCD1-202ENST00000419981 PDLIM7Q9NR12 457 aa20.54■□□□□ 0.88
PTCD1-202ENST00000419981 FBXO40Q9UH90 709 aa20.54■□□□□ 0.88
PTCD1-202ENST00000419981 ISY1Q9ULR0 285 aaKnown RBP20.54■□□□□ 0.88
PTCD1-202ENST00000419981 MAMDC4Q6UXC1 1216 aa20.53■□□□□ 0.88
PTCD1-202ENST00000419981 CCDC129Q6ZRS4 1044 aa20.53■□□□□ 0.88
PTCD1-202ENST00000419981 ZNF467Q7Z7K2 595 aaPredicted RBP20.53■□□□□ 0.88
PTCD1-202ENST00000419981 ANKRD35Q8N283 1001 aa20.53■□□□□ 0.88
PTCD1-202ENST00000419981 SLC17A8Q8NDX2 589 aa20.53■□□□□ 0.88
PTCD1-202ENST00000419981 CHST13Q8NET6 341 aa20.53■□□□□ 0.88
PTCD1-202ENST00000419981 LENG1Q96BZ8 264 aaPredicted RBP20.53■□□□□ 0.88
PTCD1-202ENST00000419981 A0A1W2PQ45 241 aaPredicted RBP20.52■□□□□ 0.88
PTCD1-202ENST00000419981 A0A1W2PQY0 241 aa20.52■□□□□ 0.88
PTCD1-202ENST00000419981 SNAI1O95863 264 aaPredicted RBP20.52■□□□□ 0.88
PTCD1-202ENST00000419981 FDX1P10109 184 aa20.52■□□□□ 0.88
PTCD1-202ENST00000419981 STAT2P52630 851 aa20.52■□□□□ 0.88
PTCD1-202ENST00000419981 PPP4R3BQ5MIZ7 849 aa20.52■□□□□ 0.88
PTCD1-202ENST00000419981 ANKRD45Q5TZF3 282 aa20.52■□□□□ 0.88
PTCD1-202ENST00000419981 CRBNQ96SW2 442 aa20.52■□□□□ 0.88
PTCD1-202ENST00000419981 MTMR10Q9NXD2 777 aa20.52■□□□□ 0.88
PTCD1-202ENST00000419981 ZHX1Q9UKY1 873 aaPredicted RBP20.52■□□□□ 0.88
PTCD1-202ENST00000419981 FAM184BQ9ULE4 1060 aa20.52■□□□□ 0.88
PTCD1-202ENST00000419981 SYNRGQ9UMZ2 1314 aa20.52■□□□□ 0.87
PTCD1-202ENST00000419981 TSPY2A6NKD2 308 aa20.51■□□□□ 0.87
PTCD1-202ENST00000419981 TMEM232C9JQI7 657 aa20.51■□□□□ 0.87
PTCD1-202ENST00000419981 ADAMTS4O75173 837 aa20.51■□□□□ 0.87
PTCD1-202ENST00000419981 SLC1A4P43007 532 aa20.51■□□□□ 0.87
PTCD1-202ENST00000419981 CTDSPL2Q05D32 466 aa20.51■□□□□ 0.87
PTCD1-202ENST00000419981 IKQ13123 557 aaPredicted RBP20.51■□□□□ 0.87
PTCD1-202ENST00000419981 SH3RF1Q7Z6J0 888 aa20.51■□□□□ 0.87
PTCD1-202ENST00000419981 FAM160B2Q86V87 743 aa20.51■□□□□ 0.87
PTCD1-202ENST00000419981 BADQ92934 168 aa20.51■□□□□ 0.87
PTCD1-202ENST00000419981 EVI5LQ96CN4 794 aa20.51■□□□□ 0.87
PTCD1-202ENST00000419981 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.51■□□□□ 0.87
PTCD1-202ENST00000419981 FOXP2O15409 715 aa20.5■□□□□ 0.87
PTCD1-202ENST00000419981 CLTBP09497 229 aa20.5■□□□□ 0.87
PTCD1-202ENST00000419981 TLE2Q04725 743 aa20.5■□□□□ 0.87
PTCD1-202ENST00000419981 CHURC1Q8WUH1 139 aa20.5■□□□□ 0.87
PTCD1-202ENST00000419981 GMCL1Q96IK5 515 aa20.5■□□□□ 0.87
PTCD1-202ENST00000419981 TSEN34Q9BSV6 310 aaKnown RBP20.5■□□□□ 0.87
PTCD1-202ENST00000419981 HOMER2Q9NSB8 354 aa20.5■□□□□ 0.87
PTCD1-202ENST00000419981 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.5■□□□□ 0.87
PTCD1-202ENST00000419981 STX8Q9UNK0 236 aa20.5■□□□□ 0.87
PTCD1-202ENST00000419981 STXBP5LQ9Y2K9 1186 aa20.5■□□□□ 0.87
PTCD1-202ENST00000419981 TRIM43BA6NCK2 446 aa20.49■□□□□ 0.87
PTCD1-202ENST00000419981 DUSP11O75319 330 aaKnown RBP20.49■□□□□ 0.87
PTCD1-202ENST00000419981 STAG1Q8WVM7 1258 aa20.49■□□□□ 0.87
PTCD1-202ENST00000419981 TRIM43Q96BQ3 446 aaPredicted RBP20.49■□□□□ 0.87
PTCD1-202ENST00000419981 CHMP4CQ96CF2 233 aa20.49■□□□□ 0.87
PTCD1-202ENST00000419981 FGD4Q96M96 766 aa20.49■□□□□ 0.87
PTCD1-202ENST00000419981 ABHD16BQ9H3Z7 469 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms