RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 IGF2BP3O00425 579 aaKnown RBP eCLIP7.33□□□□□ -1.24
RFC4-204ENST00000417876 MEIS1O00470 390 aa7.33□□□□□ -1.24
RFC4-204ENST00000417876 NOP56O00567 594 aaKnown RBP7.33□□□□□ -1.24
RFC4-204ENST00000417876 PPM1GO15355 546 aaPredicted RBP7.33□□□□□ -1.24
RFC4-204ENST00000417876 SIGLEC6O43699 453 aa7.33□□□□□ -1.24
RFC4-204ENST00000417876 DLX3O60479 287 aa7.33□□□□□ -1.24
RFC4-204ENST00000417876 RAPGEF3O95398 923 aa7.33□□□□□ -1.24
RFC4-204ENST00000417876 HSP90B1P14625 803 aaKnown RBP7.33□□□□□ -1.24
RFC4-204ENST00000417876 ZC3H12BQ5HYM0 836 aaKnown RBP7.33□□□□□ -1.24
RFC4-204ENST00000417876 GTF2IRD2BQ6EKJ0 949 aa7.33□□□□□ -1.24
RFC4-204ENST00000417876 NSMFQ6X4W1 530 aa7.33□□□□□ -1.24
RFC4-204ENST00000417876 C22orf34Q6ZV56 151 aa7.33□□□□□ -1.24
RFC4-204ENST00000417876 GTF2IRD2Q86UP8 949 aa7.33□□□□□ -1.24
RFC4-204ENST00000417876 SCUBE1Q8IWY4 988 aa7.33□□□□□ -1.24
RFC4-204ENST00000417876 CDC6Q99741 560 aa7.33□□□□□ -1.24
RFC4-204ENST00000417876 IER2Q9BTL4 223 aa7.33□□□□□ -1.24
RFC4-204ENST00000417876 DUSP15Q9H1R2 295 aaPredicted RBP7.33□□□□□ -1.24
RFC4-204ENST00000417876 NCOA5Q9HCD5 579 aaKnown RBP7.33□□□□□ -1.24
RFC4-204ENST00000417876 DIS3Q9Y2L1 958 aaKnown RBP7.33□□□□□ -1.24
RFC4-204ENST00000417876 MYO15BQ96JP2 1530 aa7.32□□□□□ -1.24
RFC4-204ENST00000417876 H0Y8X5 98 aa7.32□□□□□ -1.24
RFC4-204ENST00000417876 C6orf222P0C671 652 aaPredicted RBP7.32□□□□□ -1.24
RFC4-204ENST00000417876 SRFP11831 508 aa7.32□□□□□ -1.24
RFC4-204ENST00000417876 KIR3DL1P43629 444 aa7.32□□□□□ -1.24
RFC4-204ENST00000417876 RASSF7Q02833 373 aa7.32□□□□□ -1.24
RFC4-204ENST00000417876 NMIQ13287 307 aaPredicted RBP7.32□□□□□ -1.24
RFC4-204ENST00000417876 PTPROQ16827 1216 aa7.32□□□□□ -1.24
RFC4-204ENST00000417876 RNF43Q68DV7 783 aa7.32□□□□□ -1.24
RFC4-204ENST00000417876 SYNPOQ8N3V7 929 aa7.32□□□□□ -1.24
RFC4-204ENST00000417876 COX4I2Q96KJ9 171 aa7.32□□□□□ -1.24
RFC4-204ENST00000417876 ZDHHC15Q96MV8 337 aa7.32□□□□□ -1.24
RFC4-204ENST00000417876 CHST7Q9NS84 486 aa7.32□□□□□ -1.24
RFC4-204ENST00000417876 PRR13Q9NZ81 148 aa7.32□□□□□ -1.24
RFC4-204ENST00000417876 CCDC163A0A0D9SF12 145 aa7.31□□□□□ -1.24
RFC4-204ENST00000417876 BLACEA4D250 179 aa7.31□□□□□ -1.24
RFC4-204ENST00000417876 RNF225M0QZC1 329 aaPredicted RBP7.31□□□□□ -1.24
RFC4-204ENST00000417876 OXCT1P55809 520 aa7.31□□□□□ -1.24
RFC4-204ENST00000417876 PABPC4Q13310 644 aaKnown RBP eCLIP7.31□□□□□ -1.241e-8■■■■■ 40.1
RFC4-204ENST00000417876 NKPD1Q17RQ9 610 aa7.31□□□□□ -1.24
RFC4-204ENST00000417876 PRSS53Q2L4Q9 553 aa7.31□□□□□ -1.24
RFC4-204ENST00000417876 RNF187Q5TA31 235 aaPredicted RBP7.31□□□□□ -1.24
RFC4-204ENST00000417876 DHX37Q8IY37 1157 aaKnown RBP7.31□□□□□ -1.24
RFC4-204ENST00000417876 FAM181AQ8N9Y4 354 aa7.31□□□□□ -1.24
RFC4-204ENST00000417876 HDAC8Q9BY41 377 aa7.31□□□□□ -1.24
RFC4-204ENST00000417876 SLKQ9H2G2 1235 aaPredicted RBP7.31□□□□□ -1.24
RFC4-204ENST00000417876 NKX2-4Q9H2Z4 354 aa7.31□□□□□ -1.24
RFC4-204ENST00000417876 SPC25Q9HBM1 224 aa7.31□□□□□ -1.24
RFC4-204ENST00000417876 GTF2IRD1Q9UHL9 959 aa7.31□□□□□ -1.24
RFC4-204ENST00000417876 KCNH3Q9ULD8 1083 aa7.31□□□□□ -1.24
RFC4-204ENST00000417876 GPR55Q9Y2T6 319 aaPredicted RBP7.31□□□□□ -1.24
RFC4-204ENST00000417876 ST14Q9Y5Y6 855 aa7.31□□□□□ -1.24
RFC4-204ENST00000417876 DNAJC6O75061 913 aa7.3□□□□□ -1.24
RFC4-204ENST00000417876 GDF11O95390 407 aa7.3□□□□□ -1.24
RFC4-204ENST00000417876 GFRA1P56159 465 aa7.3□□□□□ -1.24
RFC4-204ENST00000417876 NFIAQ12857 509 aa7.3□□□□□ -1.24
RFC4-204ENST00000417876 NTRK3Q16288 839 aa7.3□□□□□ -1.24
RFC4-204ENST00000417876 DPY19L1Q2PZI1 675 aa7.3□□□□□ -1.24
RFC4-204ENST00000417876 PLA2G4EQ3MJ16 856 aa7.3□□□□□ -1.24
RFC4-204ENST00000417876 CYP27C1Q4G0S4 372 aa7.3□□□□□ -1.24
RFC4-204ENST00000417876 DENND5AQ6IQ26 1287 aa7.3□□□□□ -1.24
RFC4-204ENST00000417876 POMZP3Q6PJE2 187 aa7.3□□□□□ -1.24
RFC4-204ENST00000417876 MFSD4AQ8N468 514 aa7.3□□□□□ -1.24
RFC4-204ENST00000417876 TMEM151AQ8N4L1 468 aa7.3□□□□□ -1.24
RFC4-204ENST00000417876 NINJ1Q92982 152 aa7.3□□□□□ -1.24
RFC4-204ENST00000417876 C1orf159Q96HA4 380 aa7.3□□□□□ -1.24
RFC4-204ENST00000417876 DSCC1Q9BVC3 393 aa7.3□□□□□ -1.24
RFC4-204ENST00000417876 GPR62Q9BZJ7 368 aa7.3□□□□□ -1.24
RFC4-204ENST00000417876 PLAGL2Q9UPG8 496 aa7.3□□□□□ -1.24
RFC4-204ENST00000417876 PRKAB1Q9Y478 270 aa7.3□□□□□ -1.24
RFC4-204ENST00000417876 ARNTLO00327 626 aa7.29□□□□□ -1.24
RFC4-204ENST00000417876 PLD2O14939 933 aa7.29□□□□□ -1.24
RFC4-204ENST00000417876 RFPL3O75679 317 aa7.29□□□□□ -1.24
RFC4-204ENST00000417876 SDSP20132 328 aa7.29□□□□□ -1.24
RFC4-204ENST00000417876 GRB10Q13322 594 aa7.29□□□□□ -1.24
RFC4-204ENST00000417876 TM4SF20Q53R12 229 aa7.29□□□□□ -1.24
RFC4-204ENST00000417876 CRTC3Q6UUV7 619 aa7.29□□□□□ -1.24
RFC4-204ENST00000417876 TMEM145Q8NBT3 493 aa7.29□□□□□ -1.24
RFC4-204ENST00000417876 KREMEN2Q8NCW0 462 aa7.29□□□□□ -1.24
RFC4-204ENST00000417876 PIWIL2Q8TC59 973 aaKnown RBP7.29□□□□□ -1.24
RFC4-204ENST00000417876 CYP26B1Q9NR63 512 aa7.29□□□□□ -1.24
RFC4-204ENST00000417876 A0A087X0B3 334 aa7.28□□□□□ -1.24
RFC4-204ENST00000417876 WDR64B1ANS9 1081 aa7.28□□□□□ -1.24
RFC4-204ENST00000417876 IRS4O14654 1257 aaPredicted RBP7.28□□□□□ -1.24
RFC4-204ENST00000417876 SCG5P05408 212 aa7.28□□□□□ -1.24
RFC4-204ENST00000417876 HOXC12P31275 282 aa7.28□□□□□ -1.24
RFC4-204ENST00000417876 AMPD3Q01432 767 aa7.28□□□□□ -1.24
RFC4-204ENST00000417876 DOC2BQ14184 412 aa7.28□□□□□ -1.24
RFC4-204ENST00000417876 FNDC3BQ53EP0 1204 aaKnown RBP7.28□□□□□ -1.24
RFC4-204ENST00000417876 SLC35F1Q5T1Q4 408 aa7.28□□□□□ -1.24
RFC4-204ENST00000417876 CDKAL1Q5VV42 579 aa7.28□□□□□ -1.24
RFC4-204ENST00000417876 SPACA3Q8IXA5 215 aa7.28□□□□□ -1.24
RFC4-204ENST00000417876 NIM1KQ8IY84 436 aa7.28□□□□□ -1.24
RFC4-204ENST00000417876 ANKRD13AQ8IZ07 590 aa7.28□□□□□ -1.24
RFC4-204ENST00000417876 CRACR2BQ8N4Y2 399 aaPredicted RBP7.28□□□□□ -1.24
RFC4-204ENST00000417876 DAGLBQ8NCG7 672 aa7.28□□□□□ -1.24
RFC4-204ENST00000417876 SLC7A14Q8TBB6 771 aa7.28□□□□□ -1.24
RFC4-204ENST00000417876 SHKBP1Q8TBC3 707 aa7.28□□□□□ -1.24
RFC4-204ENST00000417876 TCTN2Q96GX1 697 aa7.28□□□□□ -1.24
RFC4-204ENST00000417876 FCRL3Q96P31 734 aaPredicted RBP7.28□□□□□ -1.24
RFC4-204ENST00000417876 PCDH12Q9NPG4 1184 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms