RNA–Protein interactions for RNA: ENST00000417709.5

TTC38-202, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-202ENST00000417709 KLHDC9Q8NEP7 349 aa17.1■□□□□ 0.33
TTC38-202ENST00000417709 NUP88Q99567 741 aaPredicted RBP17.1■□□□□ 0.33
TTC38-202ENST00000417709 GOPCQ9HD26 462 aa17.1■□□□□ 0.33
TTC38-202ENST00000417709 ZNF214Q9UL59 606 aaPredicted RBP17.1■□□□□ 0.33
TTC38-202ENST00000417709 PPP1R9AQ9ULJ8 1098 aa17.1■□□□□ 0.33
TTC38-202ENST00000417709 TRANK1O15050 2925 aa17.09■□□□□ 0.33
TTC38-202ENST00000417709 TNFRSF10AO00220 468 aa17.09■□□□□ 0.33
TTC38-202ENST00000417709 SNAI1O95863 264 aaPredicted RBP17.09■□□□□ 0.33
TTC38-202ENST00000417709 CHGBP05060 677 aa17.09■□□□□ 0.33
TTC38-202ENST00000417709 COL9A1P20849 921 aa17.09■□□□□ 0.33
TTC38-202ENST00000417709 PBX2P40425 430 aa17.09■□□□□ 0.33
TTC38-202ENST00000417709 MFSD5Q6N075 450 aa17.09■□□□□ 0.33
TTC38-202ENST00000417709 STK11IPQ8N1F8 1099 aa17.09■□□□□ 0.33
TTC38-202ENST00000417709 BOLA2Q9H3K6 86 aa17.09■□□□□ 0.33
TTC38-202ENST00000417709 ZHX1Q9UKY1 873 aaPredicted RBP17.09■□□□□ 0.33
TTC38-202ENST00000417709 SYNRGQ9UMZ2 1314 aa17.09■□□□□ 0.33
TTC38-202ENST00000417709 MCM3APO60318 1980 aa17.08■□□□□ 0.33
TTC38-202ENST00000417709 MYADML2A6NDP7 307 aa17.08■□□□□ 0.32
TTC38-202ENST00000417709 CCER2I3L3R5 266 aa17.08■□□□□ 0.32
TTC38-202ENST00000417709 C6orf222P0C671 652 aaPredicted RBP17.08■□□□□ 0.32
TTC38-202ENST00000417709 ACRP10323 421 aa17.08■□□□□ 0.32
TTC38-202ENST00000417709 CCDC85BQ15834 202 aaPredicted RBP17.08■□□□□ 0.32
TTC38-202ENST00000417709 TMEM240Q5SV17 173 aa17.08■□□□□ 0.32
TTC38-202ENST00000417709 SNRNP48Q6IEG0 339 aaKnown RBP17.08■□□□□ 0.32
TTC38-202ENST00000417709 C16orf86Q6ZW13 317 aa17.08■□□□□ 0.32
TTC38-202ENST00000417709 CPXCR1Q8N123 301 aa17.08■□□□□ 0.32
TTC38-202ENST00000417709 REPS2Q8NFH8 660 aa17.08■□□□□ 0.32
TTC38-202ENST00000417709 PANK1Q8TE04 598 aa17.08■□□□□ 0.32
TTC38-202ENST00000417709 DDRGK1Q96HY6 314 aa17.08■□□□□ 0.32
TTC38-202ENST00000417709 PRDM12Q9H4Q4 367 aa17.08■□□□□ 0.32
TTC38-202ENST00000417709 PAG1Q9NWQ8 432 aa17.08■□□□□ 0.32
TTC38-202ENST00000417709 RIPK3Q9Y572 518 aa17.08■□□□□ 0.32
TTC38-202ENST00000417709 SLC4A4Q9Y6R1 1079 aa17.08■□□□□ 0.32
TTC38-202ENST00000417709 MOXD2PA6NHM9 499 aa17.07■□□□□ 0.32
TTC38-202ENST00000417709 CSF2RAP15509 400 aa17.07■□□□□ 0.32
TTC38-202ENST00000417709 COPB2P35606 906 aa17.07■□□□□ 0.32
TTC38-202ENST00000417709 ADD2P35612 726 aa17.07■□□□□ 0.32
TTC38-202ENST00000417709 CDK7P50613 346 aa17.07■□□□□ 0.32
TTC38-202ENST00000417709 GNASQ5JWF2 1037 aa17.07■□□□□ 0.32
TTC38-202ENST00000417709 CCSAPQ6IQ19 270 aaPredicted RBP17.07■□□□□ 0.32
TTC38-202ENST00000417709 ZNF365Q70YC5 407 aa17.07■□□□□ 0.32
TTC38-202ENST00000417709 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.07■□□□□ 0.32
TTC38-202ENST00000417709 GLT1D1Q96MS3 346 aa17.07■□□□□ 0.32
TTC38-202ENST00000417709 GAS2L1Q99501 681 aaPredicted RBP17.07■□□□□ 0.32
TTC38-202ENST00000417709 SLF1Q9BQI6 1058 aa17.07■□□□□ 0.32
TTC38-202ENST00000417709 TBX21Q9UL17 535 aa17.07■□□□□ 0.32
TTC38-202ENST00000417709 DUSP11O75319 330 aaKnown RBP17.06■□□□□ 0.32
TTC38-202ENST00000417709 ASGR1P07306 291 aa17.06■□□□□ 0.32
TTC38-202ENST00000417709 PPIGQ13427 754 aaKnown RBP eCLIP17.06■□□□□ 0.323e-7■■■■□ 20
TTC38-202ENST00000417709 ACVR2BQ13705 512 aa17.06■□□□□ 0.32
TTC38-202ENST00000417709 CTR9Q6PD62 1173 aa17.06■□□□□ 0.32
TTC38-202ENST00000417709 KIF1BPQ96EK5 621 aa17.06■□□□□ 0.32
TTC38-202ENST00000417709 TEX13BQ9BXU2 312 aa17.06■□□□□ 0.32
TTC38-202ENST00000417709 PBX4Q9BYU1 374 aa17.06■□□□□ 0.32
TTC38-202ENST00000417709 PPP1R12CQ9BZL4 782 aa17.06■□□□□ 0.32
TTC38-202ENST00000417709 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.06■□□□□ 0.32
TTC38-202ENST00000417709 RAPGEFL1Q9UHV5 662 aa17.06■□□□□ 0.32
TTC38-202ENST00000417709 CTDP1Q9Y5B0 961 aaPredicted RBP17.06■□□□□ 0.32
TTC38-202ENST00000417709 ELP1O95163 1332 aa17.05■□□□□ 0.32
TTC38-202ENST00000417709 F5H6K3 240 aa17.05■□□□□ 0.32
TTC38-202ENST00000417709 IGFBP4P22692 258 aa17.05■□□□□ 0.32
TTC38-202ENST00000417709 KLRC3Q07444 240 aa17.05■□□□□ 0.32
TTC38-202ENST00000417709 CCDC144BQ3MJ40 725 aa17.05■□□□□ 0.32
TTC38-202ENST00000417709 CCDC174Q6PII3 467 aa17.05■□□□□ 0.32
TTC38-202ENST00000417709 MAMDC4Q6UXC1 1216 aa17.05■□□□□ 0.32
TTC38-202ENST00000417709 TMEM199Q8N511 208 aa17.05■□□□□ 0.32
TTC38-202ENST00000417709 MSL3Q8N5Y2 521 aaKnown RBP17.05■□□□□ 0.32
TTC38-202ENST00000417709 PRPF38AQ8NAV1 312 aaKnown RBP17.05■□□□□ 0.32
TTC38-202ENST00000417709 PCSK9Q8NBP7 692 aaKnown RBP17.05■□□□□ 0.32
TTC38-202ENST00000417709 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.05■□□□□ 0.32
TTC38-202ENST00000417709 SPC25Q9HBM1 224 aa17.05■□□□□ 0.32
TTC38-202ENST00000417709 SYNGAP1Q96PV0 1343 aa17.04■□□□□ 0.32
TTC38-202ENST00000417709 DNAJC25-GNG10A0A024R161 153 aa17.04■□□□□ 0.32
TTC38-202ENST00000417709 ARVCFO00192 962 aa17.04■□□□□ 0.32
TTC38-202ENST00000417709 ADCY6O43306 1168 aa17.04■□□□□ 0.32
TTC38-202ENST00000417709 ZBED4O75132 1171 aa17.04■□□□□ 0.32
TTC38-202ENST00000417709 CYP2C18P33260 490 aa17.04■□□□□ 0.32
TTC38-202ENST00000417709 ANKRD35Q8N283 1001 aa17.04■□□□□ 0.32
TTC38-202ENST00000417709 MKNK2Q9HBH9 465 aa17.04■□□□□ 0.32
TTC38-202ENST00000417709 RAVER2Q9HCJ3 691 aaKnown RBP17.04■□□□□ 0.32
TTC38-202ENST00000417709 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.04■□□□□ 0.32
TTC38-202ENST00000417709 XIRP2A4UGR9 3374 aa17.04■□□□□ 0.32
TTC38-202ENST00000417709 TCF20Q9UGU0 1960 aaKnown RBP17.04■□□□□ 0.32
TTC38-202ENST00000417709 MROH7Q68CQ1 1323 aa17.03■□□□□ 0.32
TTC38-202ENST00000417709 MINDY4BA8MYZ0 360 aa17.03■□□□□ 0.32
TTC38-202ENST00000417709 ATP5JP18859 108 aa17.03■□□□□ 0.32
TTC38-202ENST00000417709 NOL8Q76FK4 1167 aaKnown RBP17.03■□□□□ 0.32
TTC38-202ENST00000417709 ATXN2LQ8WWM7 1075 aaKnown RBP17.03■□□□□ 0.32
TTC38-202ENST00000417709 KIFC2Q96AC6 838 aa17.03■□□□□ 0.32
TTC38-202ENST00000417709 ASB2Q96Q27 587 aa17.03■□□□□ 0.32
TTC38-202ENST00000417709 PUS7LQ9H0K6 701 aaKnown RBP17.03■□□□□ 0.32
TTC38-202ENST00000417709 ABHD16BQ9H3Z7 469 aa17.03■□□□□ 0.32
TTC38-202ENST00000417709 CLIP2Q9UDT6 1046 aa17.03■□□□□ 0.32
TTC38-202ENST00000417709 MSRAQ9UJ68 235 aa17.03■□□□□ 0.32
TTC38-202ENST00000417709 A0A0U1RQG5 324 aaPredicted RBP17.02■□□□□ 0.32
TTC38-202ENST00000417709 NDUFB10O96000 172 aa17.02■□□□□ 0.32
TTC38-202ENST00000417709 GJA9P57773 515 aa17.02■□□□□ 0.32
TTC38-202ENST00000417709 BEX3Q00994 111 aa17.02■□□□□ 0.32
TTC38-202ENST00000417709 ADGRE1Q14246 886 aa17.02■□□□□ 0.32
TTC38-202ENST00000417709 UBE3CQ15386 1083 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms