RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-231ENST00000417521 KIFC2Q96AC6 838 aa19.34■□□□□ 0.69
DDR1-231ENST00000417521 TEX13BQ9BXU2 312 aa19.34■□□□□ 0.69
DDR1-231ENST00000417521 FLRT1Q9NZU1 646 aa19.34■□□□□ 0.69
DDR1-231ENST00000417521 DOCK3Q8IZD9 2030 aa19.33■□□□□ 0.69
DDR1-231ENST00000417521 TMEM232C9JQI7 657 aa19.33■□□□□ 0.68
DDR1-231ENST00000417521 FARP2O94887 1054 aaPredicted RBP19.33■□□□□ 0.68
DDR1-231ENST00000417521 MCCP23508 829 aa19.33■□□□□ 0.68
DDR1-231ENST00000417521 OLFML2BQ68BL8 750 aa19.33■□□□□ 0.68
DDR1-231ENST00000417521 ANKLE1Q8NAG6 615 aa19.33■□□□□ 0.68
DDR1-231ENST00000417521 CHURC1Q8WUH1 139 aa19.33■□□□□ 0.68
DDR1-231ENST00000417521 NBPF3Q9H094 633 aa19.33■□□□□ 0.68
DDR1-231ENST00000417521 SLC38A10Q9HBR0 1119 aa19.33■□□□□ 0.68
DDR1-231ENST00000417521 CTNNA3Q9UI47 895 aa19.33■□□□□ 0.68
DDR1-231ENST00000417521 CTDP1Q9Y5B0 961 aaPredicted RBP19.33■□□□□ 0.68
DDR1-231ENST00000417521 PLA2G6O60733 806 aa19.32■□□□□ 0.68
DDR1-231ENST00000417521 COBLO75128 1261 aa19.32■□□□□ 0.68
DDR1-231ENST00000417521 STAT2P52630 851 aa19.32■□□□□ 0.68
DDR1-231ENST00000417521 KCTD2Q14681 263 aa19.32■□□□□ 0.68
DDR1-231ENST00000417521 RCSD1Q6JBY9 416 aa19.32■□□□□ 0.68
DDR1-231ENST00000417521 FAM160B2Q86V87 743 aa19.32■□□□□ 0.68
DDR1-231ENST00000417521 TBC1D10CQ8IV04 446 aa19.32■□□□□ 0.68
DDR1-231ENST00000417521 TTC14Q96N46 770 aa19.32■□□□□ 0.68
DDR1-231ENST00000417521 OGDHLQ9ULD0 1010 aa19.32■□□□□ 0.68
DDR1-231ENST00000417521 RAD50Q92878 1312 aa19.31■□□□□ 0.68
DDR1-231ENST00000417521 MYH8P13535 1937 aa19.31■□□□□ 0.68
DDR1-231ENST00000417521 OAZ1P54368 228 aa19.31■□□□□ 0.68
DDR1-231ENST00000417521 BMP2KLQ5H9B9 411 aa19.31■□□□□ 0.68
DDR1-231ENST00000417521 SNRNP48Q6IEG0 339 aaKnown RBP19.31■□□□□ 0.68
DDR1-231ENST00000417521 RUFY2Q8WXA3 655 aa19.31■□□□□ 0.68
DDR1-231ENST00000417521 ESR2Q92731 530 aa19.31■□□□□ 0.68
DDR1-231ENST00000417521 MMP19Q99542 508 aa19.31■□□□□ 0.68
DDR1-231ENST00000417521 HTATIP2Q9BUP3 242 aa19.31■□□□□ 0.68
DDR1-231ENST00000417521 TOP1P11387 765 aaKnown RBP19.3■□□□□ 0.68
DDR1-231ENST00000417521 CHMLP26374 656 aa19.3■□□□□ 0.68
DDR1-231ENST00000417521 CCND3P30281 292 aaPredicted RBP19.3■□□□□ 0.68
DDR1-231ENST00000417521 CYP2C19P33261 490 aa19.3■□□□□ 0.68
DDR1-231ENST00000417521 IMMTQ16891 758 aaKnown RBP19.3■□□□□ 0.68
DDR1-231ENST00000417521 IL25Q9H293 177 aa19.3■□□□□ 0.68
DDR1-231ENST00000417521 RLFQ13129 1914 aa19.3■□□□□ 0.68
DDR1-231ENST00000417521 PLXNB2O15031 1838 aa19.29■□□□□ 0.68
DDR1-231ENST00000417521 LHX8Q68G74 356 aa19.29■□□□□ 0.68
DDR1-231ENST00000417521 CPXCR1Q8N123 301 aa19.29■□□□□ 0.68
DDR1-231ENST00000417521 DCAF4Q8WV16 495 aa19.29■□□□□ 0.68
DDR1-231ENST00000417521 TMEM47Q9BQJ4 181 aa19.29■□□□□ 0.68
DDR1-231ENST00000417521 RAVER2Q9HCJ3 691 aaKnown RBP19.29■□□□□ 0.68
DDR1-231ENST00000417521 ISY1Q9ULR0 285 aaKnown RBP19.29■□□□□ 0.68
DDR1-231ENST00000417521 DIS3Q9Y2L1 958 aaKnown RBP19.29■□□□□ 0.68
DDR1-231ENST00000417521 RIPK3Q9Y572 518 aa19.29■□□□□ 0.68
DDR1-231ENST00000417521 A0A0G2JMZ2 1700 aa19.29■□□□□ 0.68
DDR1-231ENST00000417521 IKQ13123 557 aaPredicted RBP19.28■□□□□ 0.68
DDR1-231ENST00000417521 KCTD1Q719H9 257 aa19.28■□□□□ 0.68
DDR1-231ENST00000417521 NECAB2Q7Z6G3 386 aa19.28■□□□□ 0.68
DDR1-231ENST00000417521 PAWRQ96IZ0 340 aaKnown RBP19.28■□□□□ 0.68
DDR1-231ENST00000417521 MAML3Q96JK9 1138 aa19.28■□□□□ 0.68
DDR1-231ENST00000417521 FBXO40Q9UH90 709 aa19.28■□□□□ 0.68
DDR1-231ENST00000417521 MSCO60682 206 aa19.28■□□□□ 0.68
DDR1-231ENST00000417521 ZNF792Q3KQV3 632 aa19.28■□□□□ 0.68
DDR1-231ENST00000417521 CCDC178Q5BJE1 867 aa19.28■□□□□ 0.68
DDR1-231ENST00000417521 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.28■□□□□ 0.68
DDR1-231ENST00000417521 DGKHQ86XP1 1220 aa19.28■□□□□ 0.68
DDR1-231ENST00000417521 CHST13Q8NET6 341 aa19.28■□□□□ 0.68
DDR1-231ENST00000417521 DPF3Q92784 378 aa19.28■□□□□ 0.68
DDR1-231ENST00000417521 NEDD4P46934 1319 aa19.27■□□□□ 0.68
DDR1-231ENST00000417521 PGK2P07205 417 aa19.27■□□□□ 0.67
DDR1-231ENST00000417521 CYBAP13498 195 aa19.27■□□□□ 0.67
DDR1-231ENST00000417521 KDM4AO75164 1064 aa19.26■□□□□ 0.67
DDR1-231ENST00000417521 CNGA1P29973 690 aa19.26■□□□□ 0.67
DDR1-231ENST00000417521 MNX1P50219 401 aaPredicted RBP19.26■□□□□ 0.67
DDR1-231ENST00000417521 BTNL9Q6UXG8 535 aa19.26■□□□□ 0.67
DDR1-231ENST00000417521 IQCA1Q86XH1 822 aa19.26■□□□□ 0.67
DDR1-231ENST00000417521 TRPV1Q8NER1 839 aa19.26■□□□□ 0.67
DDR1-231ENST00000417521 CHMP4CQ96CF2 233 aa19.26■□□□□ 0.67
DDR1-231ENST00000417521 DDX11Q96FC9 970 aa19.26■□□□□ 0.67
DDR1-231ENST00000417521 CNNM2Q9H8M5 875 aa19.26■□□□□ 0.67
DDR1-231ENST00000417521 DDX20Q9UHI6 824 aaKnown RBP19.26■□□□□ 0.67
DDR1-231ENST00000417521 NRBP1Q9UHY1 535 aa19.26■□□□□ 0.67
DDR1-231ENST00000417521 PRR12Q9ULL5 1215 aa19.26■□□□□ 0.67
DDR1-231ENST00000417521 MTMR7Q9Y216 660 aa19.26■□□□□ 0.67
DDR1-231ENST00000417521 SGSM2O43147 1006 aa19.25■□□□□ 0.67
DDR1-231ENST00000417521 SLC4A3P48751 1232 aa19.25■□□□□ 0.67
DDR1-231ENST00000417521 CCDC96Q2M329 555 aa19.25■□□□□ 0.67
DDR1-231ENST00000417521 DIS3LQ8TF46 1054 aaKnown RBP19.25■□□□□ 0.67
DDR1-231ENST00000417521 TINF2Q9BSI4 451 aa19.25■□□□□ 0.67
DDR1-231ENST00000417521 KRT23Q9C075 422 aa19.25■□□□□ 0.67
DDR1-231ENST00000417521 DNAJC25-GNG10A0A024R161 153 aa19.24■□□□□ 0.67
DDR1-231ENST00000417521 SNHG28P0DPA3 235 aa19.24■□□□□ 0.67
DDR1-231ENST00000417521 TKFCQ3LXA3 575 aa19.24■□□□□ 0.67
DDR1-231ENST00000417521 RASGRP2Q7LDG7 609 aa19.24■□□□□ 0.67
DDR1-231ENST00000417521 MSL3Q8N5Y2 521 aaKnown RBP19.24■□□□□ 0.67
DDR1-231ENST00000417521 ANKS1AQ92625 1134 aa19.24■□□□□ 0.67
DDR1-231ENST00000417521 ZSWIM5Q9P217 1185 aa19.24■□□□□ 0.67
DDR1-231ENST00000417521 ZNF536O15090 1300 aa19.24■□□□□ 0.67
DDR1-231ENST00000417521 B4E1Z4 1266 aa19.23■□□□□ 0.67
DDR1-231ENST00000417521 SEPT4O43236 478 aa19.23■□□□□ 0.67
DDR1-231ENST00000417521 PDHBP11177 359 aa19.23■□□□□ 0.67
DDR1-231ENST00000417521 ANKRD35Q8N283 1001 aa19.23■□□□□ 0.67
DDR1-231ENST00000417521 AGBL1Q96MI9 1066 aa19.23■□□□□ 0.67
DDR1-231ENST00000417521 ZKSCAN3Q9BRR0 538 aa19.23■□□□□ 0.67
DDR1-231ENST00000417521 C11orf49Q9H6J7 331 aa19.23■□□□□ 0.67
DDR1-231ENST00000417521 NR2E3Q9Y5X4 410 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms