RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 SIPA1L1O43166 1804 aa8.75□□□□□ -1.01
CASP4-202ENST00000417440 RCCD1A6NED2 376 aa8.75□□□□□ -1.01
CASP4-202ENST00000417440 KBTBD13C9JR72 458 aa8.75□□□□□ -1.01
CASP4-202ENST00000417440 DNM1LO00429 736 aa8.75□□□□□ -1.01
CASP4-202ENST00000417440 GOLIM4O00461 696 aa8.75□□□□□ -1.01
CASP4-202ENST00000417440 RAD21O60216 631 aa8.75□□□□□ -1.01
CASP4-202ENST00000417440 MSCO60682 206 aa8.75□□□□□ -1.01
CASP4-202ENST00000417440 IGSF3O75054 1194 aa8.75□□□□□ -1.01
CASP4-202ENST00000417440 PDE6AP16499 860 aa8.75□□□□□ -1.01
CASP4-202ENST00000417440 ERCC3P19447 782 aa8.75□□□□□ -1.01
CASP4-202ENST00000417440 HNRNPUQ00839 825 aaKnown RBP eCLIP8.75□□□□□ -1.01
CASP4-202ENST00000417440 SLFNL1Q499Z3 407 aa8.75□□□□□ -1.01
CASP4-202ENST00000417440 KIAA1755Q5JYT7 1200 aa8.75□□□□□ -1.01
CASP4-202ENST00000417440 LBX2Q6XYB7 198 aa8.75□□□□□ -1.01
CASP4-202ENST00000417440 ERC1Q8IUD2 1116 aa8.75□□□□□ -1.01
CASP4-202ENST00000417440 CLEC10AQ8IUN9 316 aa8.75□□□□□ -1.01
CASP4-202ENST00000417440 ARRDC4Q8NCT1 418 aa8.75□□□□□ -1.01
CASP4-202ENST00000417440 DYNLL2Q96FJ2 89 aa8.75□□□□□ -1.01
CASP4-202ENST00000417440 RIOK1Q9BRS2 568 aaKnown RBP8.75□□□□□ -1.01
CASP4-202ENST00000417440 HOXC10Q9NYD6 342 aa8.75□□□□□ -1.01
CASP4-202ENST00000417440 ALPK3Q96L96 1907 aa8.75□□□□□ -1.01
CASP4-202ENST00000417440 ZNF532Q9HCE3 1301 aa8.75□□□□□ -1.01
CASP4-202ENST00000417440 DNAH12Q6ZR08 3092 aa8.74□□□□□ -1.01
CASP4-202ENST00000417440 PRKAB2O43741 272 aa8.74□□□□□ -1.01
CASP4-202ENST00000417440 COBLO75128 1261 aa8.74□□□□□ -1.01
CASP4-202ENST00000417440 FLOT1O75955 427 aa8.74□□□□□ -1.01
CASP4-202ENST00000417440 HOXC6P09630 235 aa8.74□□□□□ -1.01
CASP4-202ENST00000417440 CYBAP13498 195 aa8.74□□□□□ -1.01
CASP4-202ENST00000417440 DNAJB2P25686 324 aa8.74□□□□□ -1.01
CASP4-202ENST00000417440 ADCYAP1R1P41586 468 aa8.74□□□□□ -1.01
CASP4-202ENST00000417440 TTF1Q15361 905 aaPredicted RBP8.74□□□□□ -1.01
CASP4-202ENST00000417440 SHHQ15465 462 aa8.74□□□□□ -1.01
CASP4-202ENST00000417440 TRIM60Q495X7 471 aa8.74□□□□□ -1.01
CASP4-202ENST00000417440 SLC39A5Q6ZMH5 540 aa8.74□□□□□ -1.01
CASP4-202ENST00000417440 LCORLQ8N3X6 602 aa8.74□□□□□ -1.01
CASP4-202ENST00000417440 RHPN1Q8TCX5 695 aa8.74□□□□□ -1.01
CASP4-202ENST00000417440 PANK1Q8TE04 598 aa8.74□□□□□ -1.01
CASP4-202ENST00000417440 ATG4CQ96DT6 458 aa8.74□□□□□ -1.01
CASP4-202ENST00000417440 GUCD1Q96NT3 240 aa8.74□□□□□ -1.01
CASP4-202ENST00000417440 FAM117AQ9C073 453 aa8.74□□□□□ -1.01
CASP4-202ENST00000417440 SPATC1LQ9H0A9 340 aa8.74□□□□□ -1.01
CASP4-202ENST00000417440 ARMT1Q9H993 441 aa8.74□□□□□ -1.01
CASP4-202ENST00000417440 CYP2D7A0A087X1C5 515 aa8.73□□□□□ -1.01
CASP4-202ENST00000417440 STRNO43815 780 aa8.73□□□□□ -1.01
CASP4-202ENST00000417440 IFIT2P09913 472 aaKnown RBP8.73□□□□□ -1.01
CASP4-202ENST00000417440 AKR1B1P15121 316 aa8.73□□□□□ -1.01
CASP4-202ENST00000417440 SLC4A3P48751 1232 aa8.73□□□□□ -1.01
CASP4-202ENST00000417440 GABPAQ06546 454 aa8.73□□□□□ -1.01
CASP4-202ENST00000417440 C9orf50Q5SZB4 431 aa8.73□□□□□ -1.01
CASP4-202ENST00000417440 ZNF697Q5TEC3 545 aa8.73□□□□□ -1.01
CASP4-202ENST00000417440 OLFML2BQ68BL8 750 aa8.73□□□□□ -1.01
CASP4-202ENST00000417440 TMEM179Q6ZVK1 233 aa8.73□□□□□ -1.01
CASP4-202ENST00000417440 SH3RF1Q7Z6J0 888 aa8.73□□□□□ -1.01
CASP4-202ENST00000417440 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.73□□□□□ -1.01
CASP4-202ENST00000417440 CLASRPQ8N2M8 674 aaKnown RBP8.73□□□□□ -1.01
CASP4-202ENST00000417440 NLRP7Q8WX94 980 aa8.73□□□□□ -1.01
CASP4-202ENST00000417440 BADQ92934 168 aa8.73□□□□□ -1.01
CASP4-202ENST00000417440 DDRGK1Q96HY6 314 aa8.73□□□□□ -1.01
CASP4-202ENST00000417440 BOLA2Q9H3K6 86 aa8.73□□□□□ -1.01
CASP4-202ENST00000417440 ARHGEF10LQ9HCE6 1279 aa8.73□□□□□ -1.01
CASP4-202ENST00000417440 DCP1AQ9NPI6 582 aaPredicted RBP8.73□□□□□ -1.01
CASP4-202ENST00000417440 FAM217BQ9NTX9 383 aaPredicted RBP8.73□□□□□ -1.01
CASP4-202ENST00000417440 SLC5A4Q9NY91 659 aa8.73□□□□□ -1.01
CASP4-202ENST00000417440 MAST2Q6P0Q8 1798 aa8.73□□□□□ -1.01
CASP4-202ENST00000417440 SMIM22K7EJ46 135 aa8.72□□□□□ -1.01
CASP4-202ENST00000417440 SEPT4O43236 478 aa8.72□□□□□ -1.01
CASP4-202ENST00000417440 MBD4O95243 580 aa8.72□□□□□ -1.01
CASP4-202ENST00000417440 PGK2P07205 417 aa8.72□□□□□ -1.01
CASP4-202ENST00000417440 MS4A1P11836 297 aa8.72□□□□□ -1.01
CASP4-202ENST00000417440 FCER1AP12319 257 aa8.72□□□□□ -1.01
CASP4-202ENST00000417440 SSTR3P32745 418 aaPredicted RBP8.72□□□□□ -1.01
CASP4-202ENST00000417440 LSM11P83369 360 aaKnown RBP eCLIP8.72□□□□□ -1.01
CASP4-202ENST00000417440 ICA1Q05084 483 aa8.72□□□□□ -1.01
CASP4-202ENST00000417440 LRRC41Q15345 812 aa8.72□□□□□ -1.01
CASP4-202ENST00000417440 HSP90AB4PQ58FF6 505 aa8.72□□□□□ -1.01
CASP4-202ENST00000417440 FAM47AQ5JRC9 791 aa8.72□□□□□ -1.01
CASP4-202ENST00000417440 SIAH1Q8IUQ4 282 aa8.72□□□□□ -1.01
CASP4-202ENST00000417440 STK11IPQ8N1F8 1099 aa8.72□□□□□ -1.01
CASP4-202ENST00000417440 IL27Q8NEV9 243 aa8.72□□□□□ -1.01
CASP4-202ENST00000417440 MAML3Q96JK9 1138 aa8.72□□□□□ -1.01
CASP4-202ENST00000417440 MMP19Q99542 508 aa8.72□□□□□ -1.01
CASP4-202ENST00000417440 COL25A1Q9BXS0 654 aaPredicted RBP8.72□□□□□ -1.01
CASP4-202ENST00000417440 MROH8Q9H579 483 aa8.72□□□□□ -1.01
CASP4-202ENST00000417440 TMEM134Q9H6X4 195 aa8.72□□□□□ -1.01
CASP4-202ENST00000417440 SWAP70Q9UH65 585 aa8.72□□□□□ -1.01
CASP4-202ENST00000417440 TCRBV5S4A2TA0A5A2 114 aa8.71□□□□□ -1.02
CASP4-202ENST00000417440 TRIM43BA6NCK2 446 aa8.71□□□□□ -1.02
CASP4-202ENST00000417440 BHMG1C9JSJ3 638 aaPredicted RBP8.71□□□□□ -1.02
CASP4-202ENST00000417440 SMAPO00193 183 aa8.71□□□□□ -1.02
CASP4-202ENST00000417440 PGK1P00558 417 aa8.71□□□□□ -1.02
CASP4-202ENST00000417440 CHGBP05060 677 aa8.71□□□□□ -1.02
CASP4-202ENST00000417440 EEF2P13639 858 aaKnown RBP8.71□□□□□ -1.02
CASP4-202ENST00000417440 TMEM132BQ14DG7 1078 aa8.71□□□□□ -1.02
CASP4-202ENST00000417440 TMED8Q6PL24 325 aaPredicted RBP8.71□□□□□ -1.02
CASP4-202ENST00000417440 LAPTM4BQ86VI4 370 aa8.71□□□□□ -1.02
CASP4-202ENST00000417440 AMOTL1Q8IY63 956 aa8.71□□□□□ -1.02
CASP4-202ENST00000417440 MB21D1Q8N884 522 aa8.71□□□□□ -1.02
CASP4-202ENST00000417440 SHCBP1Q8NEM2 672 aa8.71□□□□□ -1.02
CASP4-202ENST00000417440 TRIM43Q96BQ3 446 aaPredicted RBP8.71□□□□□ -1.02
CASP4-202ENST00000417440 LENG1Q96BZ8 264 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms