RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 MAP4K1Q92918 833 aa12.98□□□□□ -0.33
TM9SF4-203ENST00000417389 TTC14Q96N46 770 aa12.98□□□□□ -0.33
TM9SF4-203ENST00000417389 TEX13BQ9BXU2 312 aa12.98□□□□□ -0.33
TM9SF4-203ENST00000417389 RNF208Q9H0X6 261 aa12.98□□□□□ -0.33
TM9SF4-203ENST00000417389 RAVER2Q9HCJ3 691 aaKnown RBP12.98□□□□□ -0.33
TM9SF4-203ENST00000417389 SLC5A4Q9NY91 659 aa12.98□□□□□ -0.33
TM9SF4-203ENST00000417389 ZSWIM5Q9P217 1185 aa12.98□□□□□ -0.33
TM9SF4-203ENST00000417389 GJD2Q9UKL4 321 aa12.98□□□□□ -0.33
TM9SF4-203ENST00000417389 E7EWF7 191 aa12.97□□□□□ -0.33
TM9SF4-203ENST00000417389 ADORA2AP29274 412 aa12.97□□□□□ -0.33
TM9SF4-203ENST00000417389 COPB2P35606 906 aa12.97□□□□□ -0.33
TM9SF4-203ENST00000417389 SLC16A2P36021 539 aa12.97□□□□□ -0.33
TM9SF4-203ENST00000417389 SNAP25P60880 206 aa12.97□□□□□ -0.33
TM9SF4-203ENST00000417389 KCTD2Q14681 263 aa12.97□□□□□ -0.33
TM9SF4-203ENST00000417389 SART3Q15020 963 aaKnown RBP12.97□□□□□ -0.33
TM9SF4-203ENST00000417389 IFIT1BQ5T764 474 aaKnown RBP12.97□□□□□ -0.33
TM9SF4-203ENST00000417389 DGKHQ86XP1 1220 aa12.97□□□□□ -0.33
TM9SF4-203ENST00000417389 TRMT44Q8IYL2 757 aaKnown RBP12.97□□□□□ -0.33
TM9SF4-203ENST00000417389 PNMA1Q8ND90 353 aa12.97□□□□□ -0.33
TM9SF4-203ENST00000417389 NKX2-3Q8TAU0 364 aa12.97□□□□□ -0.33
TM9SF4-203ENST00000417389 MMP19Q99542 508 aa12.97□□□□□ -0.33
TM9SF4-203ENST00000417389 APBA2Q99767 749 aa12.97□□□□□ -0.33
TM9SF4-203ENST00000417389 LSG1Q9H089 658 aaKnown RBP12.97□□□□□ -0.33
TM9SF4-203ENST00000417389 HOMER2Q9NSB8 354 aa12.97□□□□□ -0.33
TM9SF4-203ENST00000417389 LAMA4Q16363 1823 aa12.97□□□□□ -0.33
TM9SF4-203ENST00000417389 POTEFA5A3E0 1075 aa12.96□□□□□ -0.33
TM9SF4-203ENST00000417389 IFIT3O14879 490 aaKnown RBP12.96□□□□□ -0.33
TM9SF4-203ENST00000417389 STRNO43815 780 aa12.96□□□□□ -0.33
TM9SF4-203ENST00000417389 DHX16O60231 1041 aaKnown RBP12.96□□□□□ -0.33
TM9SF4-203ENST00000417389 MLLT1Q03111 559 aaPredicted RBP12.96□□□□□ -0.33
TM9SF4-203ENST00000417389 CCL14Q16627 93 aa12.96□□□□□ -0.33
TM9SF4-203ENST00000417389 MORN1Q5T089 497 aa12.96□□□□□ -0.33
TM9SF4-203ENST00000417389 RNF20Q5VTR2 975 aa12.96□□□□□ -0.33
TM9SF4-203ENST00000417389 MFSD14CQ5VZR4 134 aa12.96□□□□□ -0.33
TM9SF4-203ENST00000417389 CHST3Q7LGC8 479 aa12.96□□□□□ -0.33
TM9SF4-203ENST00000417389 RIOX2Q8IUF8 465 aa12.96□□□□□ -0.33
TM9SF4-203ENST00000417389 ENAHQ8N8S7 591 aaPredicted RBP12.96□□□□□ -0.33
TM9SF4-203ENST00000417389 DDX11Q96FC9 970 aa12.96□□□□□ -0.33
TM9SF4-203ENST00000417389 UNC93B1Q9H1C4 597 aa12.96□□□□□ -0.33
TM9SF4-203ENST00000417389 ADAMTS5Q9UNA0 930 aa12.96□□□□□ -0.33
TM9SF4-203ENST00000417389 GOLGA8HP0CJ92 632 aa12.95□□□□□ -0.34
TM9SF4-203ENST00000417389 FDX1P10109 184 aa12.95□□□□□ -0.34
TM9SF4-203ENST00000417389 PDHBP11177 359 aa12.95□□□□□ -0.34
TM9SF4-203ENST00000417389 XRCC5P13010 732 aaKnown RBP12.95□□□□□ -0.34
TM9SF4-203ENST00000417389 PRKAR2AP13861 404 aaKnown RBP12.95□□□□□ -0.34
TM9SF4-203ENST00000417389 EN2P19622 333 aaPredicted RBP12.95□□□□□ -0.34
TM9SF4-203ENST00000417389 GRB14Q14449 540 aa12.95□□□□□ -0.34
TM9SF4-203ENST00000417389 SYDE2Q5VT97 1194 aa12.95□□□□□ -0.34
TM9SF4-203ENST00000417389 TTBK2Q6IQ55 1244 aa12.95□□□□□ -0.34
TM9SF4-203ENST00000417389 CYB5R4Q7L1T6 521 aa12.95□□□□□ -0.34
TM9SF4-203ENST00000417389 TRIB2Q92519 343 aa12.95□□□□□ -0.34
TM9SF4-203ENST00000417389 SLC38A10Q9HBR0 1119 aa12.95□□□□□ -0.34
TM9SF4-203ENST00000417389 HMX1Q9NP08 348 aaPredicted RBP12.95□□□□□ -0.34
TM9SF4-203ENST00000417389 ZNF214Q9UL59 606 aaPredicted RBP12.95□□□□□ -0.34
TM9SF4-203ENST00000417389 PRR12Q9ULL5 1215 aa12.95□□□□□ -0.34
TM9SF4-203ENST00000417389 SLC27A2O14975 620 aa12.94□□□□□ -0.34
TM9SF4-203ENST00000417389 TFRCP02786 760 aaKnown RBP12.94□□□□□ -0.34
TM9SF4-203ENST00000417389 PGK2P07205 417 aa12.94□□□□□ -0.34
TM9SF4-203ENST00000417389 PARP1P09874 1014 aaKnown RBP12.94□□□□□ -0.34
TM9SF4-203ENST00000417389 ALAS1P13196 640 aa12.94□□□□□ -0.34
TM9SF4-203ENST00000417389 CNGA1P29973 690 aa12.94□□□□□ -0.34
TM9SF4-203ENST00000417389 NOVP48745 357 aa12.94□□□□□ -0.34
TM9SF4-203ENST00000417389 ZNF543Q08ER8 600 aa12.94□□□□□ -0.34
TM9SF4-203ENST00000417389 TRIM32Q13049 653 aa12.94□□□□□ -0.34
TM9SF4-203ENST00000417389 WTAPQ15007 396 aa12.94□□□□□ -0.34
TM9SF4-203ENST00000417389 TMEM67Q5HYA8 995 aa12.94□□□□□ -0.34
TM9SF4-203ENST00000417389 CREB3L3Q68CJ9 461 aa12.94□□□□□ -0.34
TM9SF4-203ENST00000417389 ANKRD35Q8N283 1001 aa12.94□□□□□ -0.34
TM9SF4-203ENST00000417389 REPS2Q8NFH8 660 aa12.94□□□□□ -0.34
TM9SF4-203ENST00000417389 DEFB118Q96PH6 123 aa12.94□□□□□ -0.34
TM9SF4-203ENST00000417389 CCPG1Q9ULG6 757 aa12.94□□□□□ -0.34
TM9SF4-203ENST00000417389 TAF6LQ9Y6J9 622 aa12.94□□□□□ -0.34
TM9SF4-203ENST00000417389 OAZ1P54368 228 aa12.93□□□□□ -0.34
TM9SF4-203ENST00000417389 GPATCH4Q5T3I0 446 aaKnown RBP12.93□□□□□ -0.34
TM9SF4-203ENST00000417389 NFXL1Q6ZNB6 911 aa12.93□□□□□ -0.34
TM9SF4-203ENST00000417389 STOX1Q6ZVD7 989 aa12.93□□□□□ -0.34
TM9SF4-203ENST00000417389 ABRAQ8N0Z2 381 aa12.93□□□□□ -0.34
TM9SF4-203ENST00000417389 NPLOC4Q8TAT6 608 aa12.93□□□□□ -0.34
TM9SF4-203ENST00000417389 USP6NLQ92738 828 aa12.93□□□□□ -0.34
TM9SF4-203ENST00000417389 AGBL1Q96MI9 1066 aa12.93□□□□□ -0.34
TM9SF4-203ENST00000417389 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.93□□□□□ -0.341e-6■□□□□ 11.1
TM9SF4-203ENST00000417389 FBXO40Q9UH90 709 aa12.93□□□□□ -0.34
TM9SF4-203ENST00000417389 RIPK3Q9Y572 518 aa12.93□□□□□ -0.34
TM9SF4-203ENST00000417389 HTTP42858 3142 aa12.93□□□□□ -0.34
TM9SF4-203ENST00000417389 A0A0G2JMZ2 1700 aa12.93□□□□□ -0.34
TM9SF4-203ENST00000417389 DOCK3Q8IZD9 2030 aa12.93□□□□□ -0.34
TM9SF4-203ENST00000417389 RPTORQ8N122 1335 aa12.92□□□□□ -0.34
TM9SF4-203ENST00000417389 RLFQ13129 1914 aa12.92□□□□□ -0.34
TM9SF4-203ENST00000417389 ATP2A1O14983 1001 aa12.92□□□□□ -0.34
TM9SF4-203ENST00000417389 PRC1O43663 620 aa12.92□□□□□ -0.34
TM9SF4-203ENST00000417389 PLA2G6O60733 806 aa12.92□□□□□ -0.34
TM9SF4-203ENST00000417389 COBLO75128 1261 aa12.92□□□□□ -0.34
TM9SF4-203ENST00000417389 REC8O95072 547 aa12.92□□□□□ -0.34
TM9SF4-203ENST00000417389 GJB1P08034 283 aa12.92□□□□□ -0.34
TM9SF4-203ENST00000417389 CYP2C19P33261 490 aa12.92□□□□□ -0.34
TM9SF4-203ENST00000417389 MCM5P33992 734 aa12.92□□□□□ -0.34
TM9SF4-203ENST00000417389 ASPRV1Q53RT3 343 aa12.92□□□□□ -0.34
TM9SF4-203ENST00000417389 CATIPQ7Z7H3 387 aa12.92□□□□□ -0.34
TM9SF4-203ENST00000417389 CHST13Q8NET6 341 aa12.92□□□□□ -0.34
TM9SF4-203ENST00000417389 U2AF1L4Q8WU68 220 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms