RNA–Protein interactions for RNA: ENST00000416842.1

AP001042.1-201, humanhuman

TSL 3 BASIC

Gene AP001042.1, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001042.1-201ENST00000416842 CDKL5O76039 1030 aa9.38□□□□□ -0.91
AP001042.1-201ENST00000416842 SLURP2P0DP57 97 aa9.38□□□□□ -0.91
AP001042.1-201ENST00000416842 GTF2A2P52657 109 aa9.38□□□□□ -0.91
AP001042.1-201ENST00000416842 JAG1P78504 1218 aa9.38□□□□□ -0.91
AP001042.1-201ENST00000416842 TCP10Q12799 353 aa9.38□□□□□ -0.91
AP001042.1-201ENST00000416842 RESTQ13127 1097 aa9.38□□□□□ -0.91
AP001042.1-201ENST00000416842 RASA3Q14644 834 aa9.38□□□□□ -0.91
AP001042.1-201ENST00000416842 GRM4Q14833 912 aa9.38□□□□□ -0.91
AP001042.1-201ENST00000416842 PKN1Q16512 942 aa9.38□□□□□ -0.91
AP001042.1-201ENST00000416842 PPP4R3BQ5MIZ7 849 aa9.38□□□□□ -0.91
AP001042.1-201ENST00000416842 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.38□□□□□ -0.91
AP001042.1-201ENST00000416842 TMTC3Q6ZXV5 915 aa9.38□□□□□ -0.91
AP001042.1-201ENST00000416842 MICU3Q86XE3 530 aa9.38□□□□□ -0.91
AP001042.1-201ENST00000416842 SRBD1Q8N5C6 995 aaKnown RBP9.38□□□□□ -0.91
AP001042.1-201ENST00000416842 TMEM87AQ8NBN3 555 aa9.38□□□□□ -0.91
AP001042.1-201ENST00000416842 PNMA1Q8ND90 353 aa9.38□□□□□ -0.91
AP001042.1-201ENST00000416842 MAD2L2Q9UI95 211 aa9.38□□□□□ -0.91
AP001042.1-201ENST00000416842 SYNPO2Q9UMS6 1093 aa9.38□□□□□ -0.91
AP001042.1-201ENST00000416842 SSUH2Q9Y2M2 353 aa9.38□□□□□ -0.91
AP001042.1-201ENST00000416842 KIF3AQ9Y496 699 aa9.38□□□□□ -0.91
AP001042.1-201ENST00000416842 NR2E3Q9Y5X4 410 aa9.38□□□□□ -0.91
AP001042.1-201ENST00000416842 TCP10L2B9ZVM9 353 aa9.37□□□□□ -0.91
AP001042.1-201ENST00000416842 MYO1BO43795 1136 aa9.37□□□□□ -0.91
AP001042.1-201ENST00000416842 TLR2O60603 784 aa9.37□□□□□ -0.91
AP001042.1-201ENST00000416842 GNRH1P01148 92 aa9.37□□□□□ -0.91
AP001042.1-201ENST00000416842 RXRAP19793 462 aa9.37□□□□□ -0.91
AP001042.1-201ENST00000416842 CTGFP29279 349 aa9.37□□□□□ -0.91
AP001042.1-201ENST00000416842 GJA8P48165 433 aa9.37□□□□□ -0.91
AP001042.1-201ENST00000416842 GNAQP50148 359 aa9.37□□□□□ -0.91
AP001042.1-201ENST00000416842 PRMT2P55345 433 aa9.37□□□□□ -0.91
AP001042.1-201ENST00000416842 SSRP1Q08945 709 aaKnown RBP9.37□□□□□ -0.91
AP001042.1-201ENST00000416842 VGLL4Q14135 290 aa9.37□□□□□ -0.91
AP001042.1-201ENST00000416842 KIF22Q14807 665 aa9.37□□□□□ -0.91
AP001042.1-201ENST00000416842 CERKLQ49MI3 558 aaPredicted RBP9.37□□□□□ -0.91
AP001042.1-201ENST00000416842 CPLX2Q6PUV4 134 aaKnown RBP9.37□□□□□ -0.91
AP001042.1-201ENST00000416842 CDAN1Q8IWY9 1227 aa9.37□□□□□ -0.91
AP001042.1-201ENST00000416842 DDX11Q96FC9 970 aa9.37□□□□□ -0.91
AP001042.1-201ENST00000416842 LZTS2Q9BRK4 669 aa9.37□□□□□ -0.91
AP001042.1-201ENST00000416842 RNF26Q9BY78 433 aaPredicted RBP9.37□□□□□ -0.91
AP001042.1-201ENST00000416842 ZSCAN16Q9H4T2 348 aaPredicted RBP9.37□□□□□ -0.91
AP001042.1-201ENST00000416842 KANSL2Q9H9L4 492 aa9.37□□□□□ -0.91
AP001042.1-201ENST00000416842 LMBRD1Q9NUN5 540 aa9.37□□□□□ -0.91
AP001042.1-201ENST00000416842 TMOD2Q9NZR1 351 aa9.37□□□□□ -0.91
AP001042.1-201ENST00000416842 ZNF112Q9UJU3 913 aa9.37□□□□□ -0.91
AP001042.1-201ENST00000416842 SIPA1L1O43166 1804 aa9.37□□□□□ -0.91
AP001042.1-201ENST00000416842 A0A0C4DFX4 3053 aa9.37□□□□□ -0.91
AP001042.1-201ENST00000416842 GREB1LQ9C091 1923 aaPredicted RBP9.37□□□□□ -0.91
AP001042.1-201ENST00000416842 LAMA3Q16787 3333 aa9.36□□□□□ -0.91
AP001042.1-201ENST00000416842 CPLX1O14810 134 aa9.36□□□□□ -0.91
AP001042.1-201ENST00000416842 ECM2O94769 699 aaPredicted RBP9.36□□□□□ -0.91
AP001042.1-201ENST00000416842 FARP2O94887 1054 aaPredicted RBP9.36□□□□□ -0.91
AP001042.1-201ENST00000416842 TTLL1O95922 423 aa9.36□□□□□ -0.91
AP001042.1-201ENST00000416842 GJB1P08034 283 aa9.36□□□□□ -0.91
AP001042.1-201ENST00000416842 CCL5P13501 91 aa9.36□□□□□ -0.91
AP001042.1-201ENST00000416842 U2AF2P26368 475 aaKnown RBP eCLIP9.36□□□□□ -0.91
AP001042.1-201ENST00000416842 ATL3Q6DD88 541 aa9.36□□□□□ -0.91
AP001042.1-201ENST00000416842 TMEM179Q6ZVK1 233 aa9.36□□□□□ -0.91
AP001042.1-201ENST00000416842 RAB11FIP4Q86YS3 637 aa9.36□□□□□ -0.91
AP001042.1-201ENST00000416842 FAM177A1Q8N128 213 aaPredicted RBP9.36□□□□□ -0.91
AP001042.1-201ENST00000416842 GBP4Q96PP9 640 aa9.36□□□□□ -0.91
AP001042.1-201ENST00000416842 TMEM39BQ9GZU3 492 aa9.36□□□□□ -0.91
AP001042.1-201ENST00000416842 RIOX1Q9H6W3 641 aa9.36□□□□□ -0.91
AP001042.1-201ENST00000416842 KAT14Q9H8E8 782 aa9.36□□□□□ -0.91
AP001042.1-201ENST00000416842 GINM1Q9NU53 330 aa9.36□□□□□ -0.91
AP001042.1-201ENST00000416842 SRRDQ9UH36 339 aa9.36□□□□□ -0.91
AP001042.1-201ENST00000416842 DOCK3Q8IZD9 2030 aa9.36□□□□□ -0.91
AP001042.1-201ENST00000416842 BTBD19C9JJ37 291 aa9.35□□□□□ -0.91
AP001042.1-201ENST00000416842 CYTH3O43739 400 aa9.35□□□□□ -0.91
AP001042.1-201ENST00000416842 PLEKHA8P1O95397 391 aa9.35□□□□□ -0.91
AP001042.1-201ENST00000416842 DEXIO95424 95 aa9.35□□□□□ -0.91
AP001042.1-201ENST00000416842 GRK4P32298 578 aa9.35□□□□□ -0.91
AP001042.1-201ENST00000416842 KIF5BP33176 963 aa9.35□□□□□ -0.91
AP001042.1-201ENST00000416842 MAP3K9P80192 1104 aa9.35□□□□□ -0.91
AP001042.1-201ENST00000416842 CCDC144CPQ8IYA2 1237 aa9.35□□□□□ -0.91
AP001042.1-201ENST00000416842 STAG2Q8N3U4 1231 aa9.35□□□□□ -0.91
AP001042.1-201ENST00000416842 FAM184AQ8NB25 1140 aa9.35□□□□□ -0.91
AP001042.1-201ENST00000416842 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.35□□□□□ -0.91
AP001042.1-201ENST00000416842 NUP133Q8WUM0 1156 aa9.35□□□□□ -0.91
AP001042.1-201ENST00000416842 WASF1Q92558 559 aa9.35□□□□□ -0.91
AP001042.1-201ENST00000416842 PHKBQ93100 1093 aa9.35□□□□□ -0.91
AP001042.1-201ENST00000416842 MTMR8Q96EF0 704 aa9.35□□□□□ -0.91
AP001042.1-201ENST00000416842 TRIM47Q96LD4 638 aa9.35□□□□□ -0.91
AP001042.1-201ENST00000416842 AIFM3Q96NN9 605 aa9.35□□□□□ -0.91
AP001042.1-201ENST00000416842 ALG1Q9BT22 464 aa9.35□□□□□ -0.91
AP001042.1-201ENST00000416842 SPZ1Q9BXG8 430 aa9.35□□□□□ -0.91
AP001042.1-201ENST00000416842 COL25A1Q9BXS0 654 aaPredicted RBP9.35□□□□□ -0.91
AP001042.1-201ENST00000416842 RNF208Q9H0X6 261 aa9.35□□□□□ -0.91
AP001042.1-201ENST00000416842 ZCCHC17Q9NP64 241 aaKnown RBP9.35□□□□□ -0.91
AP001042.1-201ENST00000416842 CLIP2Q9UDT6 1046 aa9.35□□□□□ -0.91
AP001042.1-201ENST00000416842 NAP1L2Q9ULW6 460 aaPredicted RBP9.35□□□□□ -0.91
AP001042.1-201ENST00000416842 ATP6V1DQ9Y5K8 247 aa9.35□□□□□ -0.91
AP001042.1-201ENST00000416842 V9GY48 417 aaPredicted RBP9.35□□□□□ -0.91
AP001042.1-201ENST00000416842 CNTNAP5Q8WYK1 1306 aa9.34□□□□□ -0.91
AP001042.1-201ENST00000416842 SPDYE5A6NIY4 337 aa9.34□□□□□ -0.91
AP001042.1-201ENST00000416842 PDHBP11177 359 aa9.34□□□□□ -0.91
AP001042.1-201ENST00000416842 CETPP11597 493 aa9.34□□□□□ -0.91
AP001042.1-201ENST00000416842 PTMSP20962 102 aa9.34□□□□□ -0.91
AP001042.1-201ENST00000416842 OSBPP22059 807 aa9.34□□□□□ -0.91
AP001042.1-201ENST00000416842 CAP2P40123 477 aa9.34□□□□□ -0.91
AP001042.1-201ENST00000416842 PSMC4P43686 418 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms