RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 PTPRUQ92729 1446 aa17.34■□□□□ 0.37
PHRF1-203ENST00000416188 PNPLA6Q8IY17 1366 aa17.34■□□□□ 0.37
PHRF1-203ENST00000416188 PABPN1LA6NDY0 278 aaKnown RBP17.34■□□□□ 0.37
PHRF1-203ENST00000416188 ZEB2O60315 1214 aa17.34■□□□□ 0.37
PHRF1-203ENST00000416188 BMP3P12645 472 aa17.34■□□□□ 0.37
PHRF1-203ENST00000416188 PPP1R2P41236 205 aa17.34■□□□□ 0.37
PHRF1-203ENST00000416188 PRR16Q569H4 304 aa17.34■□□□□ 0.37
PHRF1-203ENST00000416188 CNNM4Q6P4Q7 775 aa17.34■□□□□ 0.37
PHRF1-203ENST00000416188 TPH2Q8IWU9 490 aa17.34■□□□□ 0.37
PHRF1-203ENST00000416188 ADCY9O60503 1353 aa17.34■□□□□ 0.37
PHRF1-203ENST00000416188 DIP2AQ14689 1571 aa17.34■□□□□ 0.37
PHRF1-203ENST00000416188 IGKV5-2P06315 115 aa17.34■□□□□ 0.37
PHRF1-203ENST00000416188 TNNC1P63316 161 aa17.34■□□□□ 0.37
PHRF1-203ENST00000416188 CCDC94Q9BW85 323 aaPredicted RBP17.34■□□□□ 0.37
PHRF1-203ENST00000416188 HACL1Q9UJ83 578 aa17.34■□□□□ 0.37
PHRF1-203ENST00000416188 CDHR2Q9BYE9 1310 aa17.34■□□□□ 0.37
PHRF1-203ENST00000416188 SNAP23O00161 211 aa17.34■□□□□ 0.37
PHRF1-203ENST00000416188 ARL1P40616 181 aaPredicted RBP17.34■□□□□ 0.37
PHRF1-203ENST00000416188 EVCP57679 992 aa17.34■□□□□ 0.37
PHRF1-203ENST00000416188 KCTD1Q719H9 257 aa17.34■□□□□ 0.37
PHRF1-203ENST00000416188 FANCBQ8NB91 859 aa17.34■□□□□ 0.37
PHRF1-203ENST00000416188 ZHX2Q9Y6X8 837 aa17.34■□□□□ 0.37
PHRF1-203ENST00000416188 ADD2P35612 726 aa17.33■□□□□ 0.37
PHRF1-203ENST00000416188 MNAT1P51948 309 aa17.33■□□□□ 0.37
PHRF1-203ENST00000416188 TUBB4BP68371 445 aa17.33■□□□□ 0.37
PHRF1-203ENST00000416188 LCORLQ8N3X6 602 aa17.33■□□□□ 0.37
PHRF1-203ENST00000416188 TIGD1Q96MW7 591 aa17.33■□□□□ 0.37
PHRF1-203ENST00000416188 ERCC3P19447 782 aa17.33■□□□□ 0.36
PHRF1-203ENST00000416188 PPP2R3AQ06190 1150 aa17.33■□□□□ 0.36
PHRF1-203ENST00000416188 STAMQ92783 540 aa17.33■□□□□ 0.36
PHRF1-203ENST00000416188 KIDINS220Q9ULH0 1771 aa17.33■□□□□ 0.36
PHRF1-203ENST00000416188 TRPC3Q13507 836 aa17.33■□□□□ 0.36
PHRF1-203ENST00000416188 PPP1R7Q15435 360 aa17.33■□□□□ 0.36
PHRF1-203ENST00000416188 OTUD6BQ8N6M0 293 aa17.33■□□□□ 0.36
PHRF1-203ENST00000416188 MTFR1LQ9H019 292 aa17.33■□□□□ 0.36
PHRF1-203ENST00000416188 NFE2L3Q9Y4A8 694 aa17.33■□□□□ 0.36
PHRF1-203ENST00000416188 NBPF26B4DH59 902 aa17.33■□□□□ 0.36
PHRF1-203ENST00000416188 MXRA7P84157 204 aa17.33■□□□□ 0.36
PHRF1-203ENST00000416188 NBPF10Q6P3W6 841 aaKnown RBP17.33■□□□□ 0.36
PHRF1-203ENST00000416188 NBPF15Q8N660 670 aa17.33■□□□□ 0.36
PHRF1-203ENST00000416188 CCDC63Q8NA47 563 aa17.33■□□□□ 0.36
PHRF1-203ENST00000416188 CRAMP1Q96RY5 1269 aa17.33■□□□□ 0.36
PHRF1-203ENST00000416188 STMN4Q9H169 189 aaPredicted RBP17.33■□□□□ 0.36
PHRF1-203ENST00000416188 SYNRGQ9UMZ2 1314 aa17.32■□□□□ 0.36
PHRF1-203ENST00000416188 PRKAB2O43741 272 aa17.32■□□□□ 0.36
PHRF1-203ENST00000416188 MLKLQ8NB16 471 aa17.32■□□□□ 0.36
PHRF1-203ENST00000416188 KRT5P13647 590 aa17.32■□□□□ 0.36
PHRF1-203ENST00000416188 ITPK1Q13572 414 aa17.32■□□□□ 0.36
PHRF1-203ENST00000416188 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.32■□□□□ 0.36
PHRF1-203ENST00000416188 MICALL2Q8IY33 904 aa17.32■□□□□ 0.36
PHRF1-203ENST00000416188 SREK1Q8WXA9 508 aaKnown RBP17.32■□□□□ 0.36
PHRF1-203ENST00000416188 ISCA1Q9BUE6 129 aa17.32■□□□□ 0.36
PHRF1-203ENST00000416188 IGBP1P78318 339 aa17.32■□□□□ 0.36
PHRF1-203ENST00000416188 CALCOCO2Q13137 446 aa17.32■□□□□ 0.36
PHRF1-203ENST00000416188 SUGCTQ9HAC7 445 aa17.32■□□□□ 0.36
PHRF1-203ENST00000416188 MTRF1LQ9UGC7 380 aaKnown RBP17.32■□□□□ 0.36
PHRF1-203ENST00000416188 DCCP43146 1447 aa17.32■□□□□ 0.36
PHRF1-203ENST00000416188 CETN3O15182 167 aa17.32■□□□□ 0.36
PHRF1-203ENST00000416188 IVLP07476 585 aa17.32■□□□□ 0.36
PHRF1-203ENST00000416188 SLC8A3P57103 927 aa17.32■□□□□ 0.36
PHRF1-203ENST00000416188 PAK1Q13153 545 aa17.32■□□□□ 0.36
PHRF1-203ENST00000416188 WDR44Q5JSH3 913 aa17.32■□□□□ 0.36
PHRF1-203ENST00000416188 MSANTD4Q8NCY6 345 aa17.32■□□□□ 0.36
PHRF1-203ENST00000416188 MTUS1Q9ULD2 1270 aa17.32■□□□□ 0.36
PHRF1-203ENST00000416188 SSX2IPQ9Y2D8 614 aa17.32■□□□□ 0.36
PHRF1-203ENST00000416188 ZBTB16Q05516 673 aa17.31■□□□□ 0.36
PHRF1-203ENST00000416188 ASPRV1Q53RT3 343 aa17.31■□□□□ 0.36
PHRF1-203ENST00000416188 HERC4Q5GLZ8 1057 aaPredicted RBP17.31■□□□□ 0.36
PHRF1-203ENST00000416188 ZMYM1Q5SVZ6 1142 aa17.31■□□□□ 0.36
PHRF1-203ENST00000416188 GPIHBP1Q8IV16 184 aa17.31■□□□□ 0.36
PHRF1-203ENST00000416188 DYNLL2Q96FJ2 89 aa17.31■□□□□ 0.36
PHRF1-203ENST00000416188 DDAH1O94760 285 aa17.31■□□□□ 0.36
PHRF1-203ENST00000416188 STAT2P52630 851 aa17.31■□□□□ 0.36
PHRF1-203ENST00000416188 RNASE9P60153 205 aaKnown RBP17.31■□□□□ 0.36
PHRF1-203ENST00000416188 CFAP58Q5T655 872 aa17.31■□□□□ 0.36
PHRF1-203ENST00000416188 DYMQ7RTS9 669 aa17.31■□□□□ 0.36
PHRF1-203ENST00000416188 PLA2G4DQ86XP0 818 aa17.31■□□□□ 0.36
PHRF1-203ENST00000416188 C17orf53Q8N3J3 647 aaPredicted RBP17.31■□□□□ 0.36
PHRF1-203ENST00000416188 LRRC45Q96CN5 670 aa17.31■□□□□ 0.36
PHRF1-203ENST00000416188 TRPM1Q7Z4N2 1603 aa17.31■□□□□ 0.36
PHRF1-203ENST00000416188 ZNF75DP51815 510 aa17.31■□□□□ 0.36
PHRF1-203ENST00000416188 ME3Q16798 604 aa17.31■□□□□ 0.36
PHRF1-203ENST00000416188 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.31■□□□□ 0.36
PHRF1-203ENST00000416188 CCDC114Q96M63 670 aa17.31■□□□□ 0.36
PHRF1-203ENST00000416188 TSGA10Q9BZW7 698 aa17.31■□□□□ 0.36
PHRF1-203ENST00000416188 CNOT7Q9UIV1 285 aaKnown RBP17.31■□□□□ 0.36
PHRF1-203ENST00000416188 PRDX5P30044 214 aa17.31■□□□□ 0.36
PHRF1-203ENST00000416188 DEPTORQ8TB45 409 aa17.31■□□□□ 0.36
PHRF1-203ENST00000416188 GH2P01242 217 aa17.3■□□□□ 0.36
PHRF1-203ENST00000416188 CCDC6Q16204 474 aa17.3■□□□□ 0.36
PHRF1-203ENST00000416188 MYCT1Q8N699 235 aa17.3■□□□□ 0.36
PHRF1-203ENST00000416188 TNFAIP3P21580 790 aa17.3■□□□□ 0.36
PHRF1-203ENST00000416188 TMOD1P28289 359 aa17.3■□□□□ 0.36
PHRF1-203ENST00000416188 RAD51AP2Q09MP3 1159 aa17.3■□□□□ 0.36
PHRF1-203ENST00000416188 SEPT14Q6ZU15 432 aa17.3■□□□□ 0.36
PHRF1-203ENST00000416188 GPKOWQ92917 476 aaPredicted RBP eCLIP17.3■□□□□ 0.36
PHRF1-203ENST00000416188 OTUD5Q96G74 571 aa17.3■□□□□ 0.36
PHRF1-203ENST00000416188 LMBRD1Q9NUN5 540 aa17.3■□□□□ 0.36
PHRF1-203ENST00000416188 MED23Q9ULK4 1368 aa17.3■□□□□ 0.36
PHRF1-203ENST00000416188 DLC1Q96QB1 1528 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms