RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 CFAP221Q4G0U5 840 aa14.26□□□□□ -0.13
SCN1B-202ENST00000415950 NBPF14Q5TI25 921 aa14.26□□□□□ -0.13
SCN1B-202ENST00000415950 MICAL1Q8TDZ2 1067 aa14.26□□□□□ -0.13
SCN1B-202ENST00000415950 BIN2Q9UBW5 565 aaPredicted RBP14.26□□□□□ -0.13
SCN1B-202ENST00000415950 PLXNC1O60486 1568 aa14.26□□□□□ -0.13
SCN1B-202ENST00000415950 ATP10DQ9P241 1426 aa14.26□□□□□ -0.13
SCN1B-202ENST00000415950 RPSAP08865 295 aaKnown RBP14.26□□□□□ -0.13
SCN1B-202ENST00000415950 SLFN14P0C7P3 912 aa14.26□□□□□ -0.13
SCN1B-202ENST00000415950 ZNF365Q70YC5 407 aa14.26□□□□□ -0.13
SCN1B-202ENST00000415950 EXOC4Q96A65 974 aa14.26□□□□□ -0.13
SCN1B-202ENST00000415950 OSBPL5Q9H0X9 879 aaPredicted RBP14.26□□□□□ -0.13
SCN1B-202ENST00000415950 NDC80O14777 642 aa14.26□□□□□ -0.13
SCN1B-202ENST00000415950 RPN1P04843 607 aaKnown RBP14.26□□□□□ -0.13
SCN1B-202ENST00000415950 LRRC41Q15345 812 aa14.26□□□□□ -0.13
SCN1B-202ENST00000415950 MAP7D1Q3KQU3 841 aa14.26□□□□□ -0.13
SCN1B-202ENST00000415950 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.26□□□□□ -0.13
SCN1B-202ENST00000415950 IFT74Q96LB3 600 aa14.26□□□□□ -0.13
SCN1B-202ENST00000415950 TUBGCP2Q9BSJ2 902 aa14.26□□□□□ -0.13
SCN1B-202ENST00000415950 CTTNBP2NLQ9P2B4 639 aa14.26□□□□□ -0.13
SCN1B-202ENST00000415950 ARAP3Q8WWN8 1544 aa14.26□□□□□ -0.13
SCN1B-202ENST00000415950 LDHBP07195 334 aaKnown RBP14.25□□□□□ -0.13
SCN1B-202ENST00000415950 TUBB2AQ13885 445 aa14.25□□□□□ -0.13
SCN1B-202ENST00000415950 POTEDQ86YR6 584 aa14.25□□□□□ -0.13
SCN1B-202ENST00000415950 OXER1Q8TDS5 423 aa14.25□□□□□ -0.13
SCN1B-202ENST00000415950 LRRC45Q96CN5 670 aa14.25□□□□□ -0.13
SCN1B-202ENST00000415950 NAP1L3Q99457 506 aaPredicted RBP14.25□□□□□ -0.13
SCN1B-202ENST00000415950 TUBB2BQ9BVA1 445 aa14.25□□□□□ -0.13
SCN1B-202ENST00000415950 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.25□□□□□ -0.13
SCN1B-202ENST00000415950 PARP1P09874 1014 aaKnown RBP14.25□□□□□ -0.13
SCN1B-202ENST00000415950 ATP11AP98196 1134 aa14.25□□□□□ -0.13
SCN1B-202ENST00000415950 USP49Q70CQ1 688 aa14.25□□□□□ -0.13
SCN1B-202ENST00000415950 MAPKAPK5Q8IW41 473 aa14.25□□□□□ -0.13
SCN1B-202ENST00000415950 ANKRD42Q8N9B4 389 aa14.25□□□□□ -0.13
SCN1B-202ENST00000415950 LRRN4CLQ8ND94 238 aa14.25□□□□□ -0.13
SCN1B-202ENST00000415950 ENOX1Q8TC92 643 aaKnown RBP14.25□□□□□ -0.13
SCN1B-202ENST00000415950 VEZTQ9HBM0 779 aa14.25□□□□□ -0.13
SCN1B-202ENST00000415950 STK38LQ9Y2H1 464 aa14.25□□□□□ -0.13
SCN1B-202ENST00000415950 UTP11Q9Y3A2 253 aaKnown RBP14.25□□□□□ -0.13
SCN1B-202ENST00000415950 BACH1O14867 736 aa14.25□□□□□ -0.13
SCN1B-202ENST00000415950 PDE8AO60658 829 aa14.25□□□□□ -0.13
SCN1B-202ENST00000415950 CFAP157Q5JU67 520 aa14.25□□□□□ -0.13
SCN1B-202ENST00000415950 CCDC170Q8IYT3 715 aa14.25□□□□□ -0.13
SCN1B-202ENST00000415950 ZC3H12CQ9C0D7 883 aaKnown RBP14.25□□□□□ -0.13
SCN1B-202ENST00000415950 FAM169AQ9Y6X4 670 aa14.25□□□□□ -0.13
SCN1B-202ENST00000415950 CTIFO43310 598 aaKnown RBP14.25□□□□□ -0.13
SCN1B-202ENST00000415950 PPP6R2O75170 966 aa14.25□□□□□ -0.13
SCN1B-202ENST00000415950 CDC27P30260 824 aa14.25□□□□□ -0.13
SCN1B-202ENST00000415950 PAK2Q13177 524 aa14.25□□□□□ -0.13
SCN1B-202ENST00000415950 SHC4Q6S5L8 630 aa14.25□□□□□ -0.13
SCN1B-202ENST00000415950 RUFY4Q6ZNE9 571 aa14.25□□□□□ -0.13
SCN1B-202ENST00000415950 RAB3IL1Q8TBN0 382 aa14.25□□□□□ -0.13
SCN1B-202ENST00000415950 TBC1D31Q96DN5 1066 aa14.25□□□□□ -0.13
SCN1B-202ENST00000415950 TRIM49BA6NDI0 452 aa14.24□□□□□ -0.13
SCN1B-202ENST00000415950 CTNNA1P35221 906 aaKnown RBP14.24□□□□□ -0.13
SCN1B-202ENST00000415950 IFNAR2P48551 515 aa14.24□□□□□ -0.13
SCN1B-202ENST00000415950 RPS6KA1Q15418 735 aa14.24□□□□□ -0.13
SCN1B-202ENST00000415950 ASIC2Q16515 512 aa14.24□□□□□ -0.13
SCN1B-202ENST00000415950 FMNL3Q8IVF7 1028 aa14.24□□□□□ -0.13
SCN1B-202ENST00000415950 KRT12Q99456 494 aa14.24□□□□□ -0.13
SCN1B-202ENST00000415950 RBM28Q9NW13 759 aaKnown RBP14.24□□□□□ -0.13
SCN1B-202ENST00000415950 FEZ2Q9UHY8 353 aaPredicted RBP14.24□□□□□ -0.13
SCN1B-202ENST00000415950 FRMD4BQ9Y2L6 1034 aa14.24□□□□□ -0.13
SCN1B-202ENST00000415950 MLH3Q9UHC1 1453 aa14.24□□□□□ -0.13
SCN1B-202ENST00000415950 EPB41P11171 864 aaKnown RBP14.24□□□□□ -0.13
SCN1B-202ENST00000415950 VPS41P49754 854 aa14.24□□□□□ -0.13
SCN1B-202ENST00000415950 SCARF1Q14162 830 aa14.24□□□□□ -0.13
SCN1B-202ENST00000415950 CNNM4Q6P4Q7 775 aa14.24□□□□□ -0.13
SCN1B-202ENST00000415950 EPB41L5Q9HCM4 733 aa14.24□□□□□ -0.13
SCN1B-202ENST00000415950 MED4Q9NPJ6 270 aa14.24□□□□□ -0.13
SCN1B-202ENST00000415950 USTQ9Y2C2 406 aa14.24□□□□□ -0.13
SCN1B-202ENST00000415950 PCDHB13Q9Y5F0 798 aa14.24□□□□□ -0.13
SCN1B-202ENST00000415950 TADA3O75528 432 aa14.24□□□□□ -0.13
SCN1B-202ENST00000415950 ADCY1Q08828 1119 aa14.24□□□□□ -0.13
SCN1B-202ENST00000415950 PDCLQ13371 301 aa14.24□□□□□ -0.13
SCN1B-202ENST00000415950 PPP2R5DQ14738 602 aa14.24□□□□□ -0.13
SCN1B-202ENST00000415950 SEPT14Q6ZU15 432 aa14.24□□□□□ -0.13
SCN1B-202ENST00000415950 FNBP4Q8N3X1 1017 aaPredicted RBP14.24□□□□□ -0.13
SCN1B-202ENST00000415950 DNM2P50570 870 aa14.23□□□□□ -0.13
SCN1B-202ENST00000415950 CACNB1Q02641 598 aaPredicted RBP14.23□□□□□ -0.13
SCN1B-202ENST00000415950 JPH2Q9BR39 696 aaPredicted RBP14.23□□□□□ -0.13
SCN1B-202ENST00000415950 NDUFA10O95299 355 aa14.23□□□□□ -0.13
SCN1B-202ENST00000415950 FTCDO95954 541 aa14.23□□□□□ -0.13
SCN1B-202ENST00000415950 CLTAP09496 248 aa14.23□□□□□ -0.13
SCN1B-202ENST00000415950 MRPL12P52815 198 aaKnown RBP14.23□□□□□ -0.13
SCN1B-202ENST00000415950 POLR2FP61218 127 aaKnown RBP14.23□□□□□ -0.13
SCN1B-202ENST00000415950 COL9A3Q14050 684 aaPredicted RBP14.23□□□□□ -0.13
SCN1B-202ENST00000415950 RASA3Q14644 834 aa14.23□□□□□ -0.13
SCN1B-202ENST00000415950 KRT31Q15323 416 aa14.23□□□□□ -0.13
SCN1B-202ENST00000415950 RBM26Q5T8P6 1007 aaKnown RBP14.23□□□□□ -0.13
SCN1B-202ENST00000415950 CYB5R4Q7L1T6 521 aa14.23□□□□□ -0.13
SCN1B-202ENST00000415950 PEX26Q7Z412 305 aa14.23□□□□□ -0.13
SCN1B-202ENST00000415950 SEC31BQ9NQW1 1179 aa14.23□□□□□ -0.13
SCN1B-202ENST00000415950 PNPLA6Q8IY17 1366 aa14.23□□□□□ -0.13
SCN1B-202ENST00000415950 LRRC7Q96NW7 1537 aa14.23□□□□□ -0.13
SCN1B-202ENST00000415950 VSNL1P62760 191 aa14.23□□□□□ -0.13
SCN1B-202ENST00000415950 DYNLL1P63167 89 aaKnown RBP14.23□□□□□ -0.13
SCN1B-202ENST00000415950 CCDC105Q8IYK2 499 aa14.23□□□□□ -0.13
SCN1B-202ENST00000415950 SMCR8Q8TEV9 937 aaPredicted RBP14.23□□□□□ -0.13
SCN1B-202ENST00000415950 MCUR1Q96AQ8 359 aa14.23□□□□□ -0.13
SCN1B-202ENST00000415950 CCDC51Q96ER9 411 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms