RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 RNF40O75150 1001 aa22.89■■□□□ 1.25
AP1S3-205ENST00000415298 ARHGAP25P42331 645 aa22.89■■□□□ 1.25
AP1S3-205ENST00000415298 CKAP2LQ8IYA6 745 aa22.89■■□□□ 1.25
AP1S3-205ENST00000415298 SPATA5Q8NB90 893 aa22.89■■□□□ 1.25
AP1S3-205ENST00000415298 CCDC150Q8NCX0 1101 aa22.89■■□□□ 1.25
AP1S3-205ENST00000415298 EVI5LQ96CN4 794 aa22.89■■□□□ 1.25
AP1S3-205ENST00000415298 ZNF512BQ96KM6 892 aaPredicted RBP22.89■■□□□ 1.25
AP1S3-205ENST00000415298 ZEB2O60315 1214 aa22.88■■□□□ 1.25
AP1S3-205ENST00000415298 F13A1P00488 732 aa22.88■■□□□ 1.25
AP1S3-205ENST00000415298 SPATS2Q86XZ4 545 aaKnown RBP22.88■■□□□ 1.25
AP1S3-205ENST00000415298 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.88■■□□□ 1.25
AP1S3-205ENST00000415298 RAB21Q9UL25 225 aa22.88■■□□□ 1.25
AP1S3-205ENST00000415298 UQCRFS1P1P0C7P4 283 aa22.88■■□□□ 1.25
AP1S3-205ENST00000415298 CDR1P51861 262 aa22.88■■□□□ 1.25
AP1S3-205ENST00000415298 PLCB4Q15147 1175 aa22.88■■□□□ 1.25
AP1S3-205ENST00000415298 ARHGAP22Q7Z5H3 698 aa22.88■■□□□ 1.25
AP1S3-205ENST00000415298 DNAJC25Q9H1X3 360 aa22.88■■□□□ 1.25
AP1S3-205ENST00000415298 PCDHGC5Q9Y5F6 944 aa22.88■■□□□ 1.25
AP1S3-205ENST00000415298 SNED1Q8TER0 1413 aa22.88■■□□□ 1.25
AP1S3-205ENST00000415298 BRCA1P38398 1863 aaKnown RBP22.88■■□□□ 1.25
AP1S3-205ENST00000415298 CASP8Q14790 479 aa22.87■■□□□ 1.25
AP1S3-205ENST00000415298 DOK7Q18PE1 504 aa22.87■■□□□ 1.25
AP1S3-205ENST00000415298 WASHC4Q2M389 1173 aa22.87■■□□□ 1.25
AP1S3-205ENST00000415298 RRP12Q5JTH9 1297 aaKnown RBP22.87■■□□□ 1.25
AP1S3-205ENST00000415298 B4GALNT4Q76KP1 1039 aa22.87■■□□□ 1.25
AP1S3-205ENST00000415298 HOOK2Q96ED9 719 aa22.87■■□□□ 1.25
AP1S3-205ENST00000415298 IL25Q9H293 177 aa22.87■■□□□ 1.25
AP1S3-205ENST00000415298 COL1A1P02452 1464 aaPredicted RBP22.87■■□□□ 1.25
AP1S3-205ENST00000415298 SDCCAG8Q86SQ7 713 aaPredicted RBP22.87■■□□□ 1.25
AP1S3-205ENST00000415298 SYT17Q9BSW7 474 aa22.87■■□□□ 1.25
AP1S3-205ENST00000415298 FSD1Q9BTV5 496 aa22.87■■□□□ 1.25
AP1S3-205ENST00000415298 MYO5AQ9Y4I1 1855 aaKnown RBP22.86■■□□□ 1.25
AP1S3-205ENST00000415298 FANCGO15287 622 aa22.86■■□□□ 1.25
AP1S3-205ENST00000415298 CCDC40Q4G0X9 1142 aa22.86■■□□□ 1.25
AP1S3-205ENST00000415298 MIS18BP1Q6P0N0 1132 aa22.86■■□□□ 1.25
AP1S3-205ENST00000415298 EXOC8Q8IYI6 725 aa22.86■■□□□ 1.25
AP1S3-205ENST00000415298 ZC3H12CQ9C0D7 883 aaKnown RBP22.86■■□□□ 1.25
AP1S3-205ENST00000415298 TSPYL2Q9H2G4 693 aaPredicted RBP22.86■■□□□ 1.25
AP1S3-205ENST00000415298 MMADHCQ9H3L0 296 aaPredicted RBP22.86■■□□□ 1.25
AP1S3-205ENST00000415298 PIH1D3Q9NQM4 214 aaKnown RBP22.86■■□□□ 1.25
AP1S3-205ENST00000415298 NAT1P18440 290 aa22.86■■□□□ 1.25
AP1S3-205ENST00000415298 SLC8A1P32418 973 aa22.86■■□□□ 1.25
AP1S3-205ENST00000415298 SFSWAPQ12872 951 aaKnown RBP22.86■■□□□ 1.25
AP1S3-205ENST00000415298 NAT10Q9H0A0 1025 aaKnown RBP22.86■■□□□ 1.25
AP1S3-205ENST00000415298 CD209Q9NNX6 404 aa22.86■■□□□ 1.25
AP1S3-205ENST00000415298 SLC39A2Q9NP94 309 aa22.86■■□□□ 1.25
AP1S3-205ENST00000415298 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.86■■□□□ 1.25
AP1S3-205ENST00000415298 U3KPZ7 1027 aaPredicted RBP22.86■■□□□ 1.25
AP1S3-205ENST00000415298 C15orf52Q6ZUT6 534 aaKnown RBP22.85■■□□□ 1.25
AP1S3-205ENST00000415298 BRAPQ7Z569 592 aa22.85■■□□□ 1.25
AP1S3-205ENST00000415298 C17orf50Q8WW18 174 aa22.85■■□□□ 1.25
AP1S3-205ENST00000415298 CCDC114Q96M63 670 aa22.85■■□□□ 1.25
AP1S3-205ENST00000415298 MEFVO15553 781 aaPredicted RBP22.85■■□□□ 1.25
AP1S3-205ENST00000415298 STX6O43752 255 aa22.85■■□□□ 1.25
AP1S3-205ENST00000415298 PRPF6O94906 941 aaKnown RBP22.85■■□□□ 1.25
AP1S3-205ENST00000415298 IRAK1P51617 712 aa22.85■■□□□ 1.25
AP1S3-205ENST00000415298 ROR2Q01974 943 aaKnown RBP22.85■■□□□ 1.25
AP1S3-205ENST00000415298 ERICH2A1L162 156 aa22.84■■□□□ 1.25
AP1S3-205ENST00000415298 OPA1O60313 960 aa22.84■■□□□ 1.25
AP1S3-205ENST00000415298 RPSAP08865 295 aaKnown RBP22.84■■□□□ 1.25
AP1S3-205ENST00000415298 GCLCP48506 637 aaPredicted RBP22.84■■□□□ 1.25
AP1S3-205ENST00000415298 PAPOLAP51003 745 aaKnown RBP22.84■■□□□ 1.25
AP1S3-205ENST00000415298 ACBD5Q5T8D3 534 aaPredicted RBP22.84■■□□□ 1.25
AP1S3-205ENST00000415298 KBTBD3Q8NAB2 608 aa22.84■■□□□ 1.25
AP1S3-205ENST00000415298 BCAS4Q8TDM0 211 aa22.84■■□□□ 1.25
AP1S3-205ENST00000415298 CENPHQ9H3R5 247 aa22.84■■□□□ 1.25
AP1S3-205ENST00000415298 MED23Q9ULK4 1368 aa22.84■■□□□ 1.25
AP1S3-205ENST00000415298 AOC3Q16853 763 aa22.84■■□□□ 1.25
AP1S3-205ENST00000415298 ALS2CR12Q96Q35 445 aa22.84■■□□□ 1.25
AP1S3-205ENST00000415298 ARPC5LQ9BPX5 153 aa22.84■■□□□ 1.25
AP1S3-205ENST00000415298 GBP3Q9H0R5 595 aa22.84■■□□□ 1.25
AP1S3-205ENST00000415298 DBNDD1Q9H9R9 158 aa22.84■■□□□ 1.25
AP1S3-205ENST00000415298 ABCB6Q9NP58 842 aa22.84■■□□□ 1.25
AP1S3-205ENST00000415298 KCNQ5Q9NR82 932 aa22.84■■□□□ 1.25
AP1S3-205ENST00000415298 CHD4Q14839 1912 aa22.84■■□□□ 1.25
AP1S3-205ENST00000415298 ZNF804AQ7Z570 1209 aa22.83■■□□□ 1.25
AP1S3-205ENST00000415298 FAM227BQ96M60 508 aa22.83■■□□□ 1.25
AP1S3-205ENST00000415298 RTFDC1Q9BY42 306 aaPredicted RBP22.83■■□□□ 1.25
AP1S3-205ENST00000415298 AARSP49588 968 aaKnown RBP eCLIP22.83■■□□□ 1.25
AP1S3-205ENST00000415298 CCDC15Q0P6D6 951 aa22.83■■□□□ 1.25
AP1S3-205ENST00000415298 NOL8Q76FK4 1167 aaKnown RBP22.83■■□□□ 1.25
AP1S3-205ENST00000415298 AGAP3Q96P47 875 aa22.83■■□□□ 1.25
AP1S3-205ENST00000415298 VCPKMTQ9H867 229 aa22.83■■□□□ 1.25
AP1S3-205ENST00000415298 ZNF277Q9NRM2 450 aaPredicted RBP22.83■■□□□ 1.25
AP1S3-205ENST00000415298 ABCF2Q9UG63 623 aa22.83■■□□□ 1.25
AP1S3-205ENST00000415298 PPP1R12BO60237 982 aaPredicted RBP22.82■■□□□ 1.24
AP1S3-205ENST00000415298 YTHDF3Q7Z739 585 aaKnown RBP22.82■■□□□ 1.24
AP1S3-205ENST00000415298 DDX19AQ9NUU7 478 aaKnown RBP22.82■■□□□ 1.24
AP1S3-205ENST00000415298 IDH1O75874 414 aaKnown RBP22.82■■□□□ 1.24
AP1S3-205ENST00000415298 DNM1Q05193 864 aaKnown RBP22.82■■□□□ 1.24
AP1S3-205ENST00000415298 PARP9Q8IXQ6 854 aa22.82■■□□□ 1.24
AP1S3-205ENST00000415298 SEC62Q99442 399 aaKnown RBP22.82■■□□□ 1.24
AP1S3-205ENST00000415298 CORO1CQ9ULV4 474 aaPredicted RBP22.82■■□□□ 1.24
AP1S3-205ENST00000415298 LRRC23Q53EV4 343 aaPredicted RBP22.81■■□□□ 1.24
AP1S3-205ENST00000415298 MSANTD4Q8NCY6 345 aa22.81■■□□□ 1.24
AP1S3-205ENST00000415298 TPCN1Q9ULQ1 816 aa22.81■■□□□ 1.24
AP1S3-205ENST00000415298 SMNDC1O75940 238 aaKnown RBP eCLIP22.81■■□□□ 1.24
AP1S3-205ENST00000415298 SFPQP23246 707 aaKnown RBP eCLIP22.81■■□□□ 1.24
AP1S3-205ENST00000415298 KIF4BQ2VIQ3 1234 aa22.81■■□□□ 1.24
AP1S3-205ENST00000415298 RTKN2Q8IZC4 609 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms