RNA–Protein interactions for RNA: ENST00000413538.5

PRKACB-209, Transcript of protein kinase cAMP-activated catalytic subunit beta, human

TSL 5

Gene PRKACB, Length 730 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKACB-209	ENST00000413538	CDC6	Q99741	560 aa		6.6	□□□□□ -1.35
PRKACB-209	ENST00000413538	MRPL4	Q9BYD3	311 aa	Known RBP	6.6	□□□□□ -1.35
PRKACB-209	ENST00000413538	PCDH12	Q9NPG4	1184 aa		6.6	□□□□□ -1.35
PRKACB-209	ENST00000413538	PRDM5	Q9NQX1	630 aa	Predicted RBP	6.6	□□□□□ -1.35
PRKACB-209	ENST00000413538	TPX2	Q9ULW0	747 aa	Known RBP	6.6	□□□□□ -1.35
PRKACB-209	ENST00000413538	NOP58	Q9Y2X3	529 aa	Known RBP	6.6	□□□□□ -1.35
PRKACB-209	ENST00000413538	SUGT1	Q9Y2Z0	365 aa		6.6	□□□□□ -1.35
PRKACB-209	ENST00000413538	COL4A3BP	Q9Y5P4	624 aa		6.6	□□□□□ -1.35
PRKACB-209	ENST00000413538	SIGLEC6	O43699	453 aa		6.59	□□□□□ -1.35
PRKACB-209	ENST00000413538	SCG5	P05408	212 aa		6.59	□□□□□ -1.35
PRKACB-209	ENST00000413538	SRF	P11831	508 aa		6.59	□□□□□ -1.35
PRKACB-209	ENST00000413538	PABPC4	Q13310	644 aa	Known RBP eCLIP	6.59	□□□□□ -1.35	4e-11	■■■■■ 96.3
PRKACB-209	ENST00000413538	CBX2	Q14781	532 aa	Predicted RBP	6.59	□□□□□ -1.35
PRKACB-209	ENST00000413538	NOL9	Q5SY16	702 aa	Known RBP	6.59	□□□□□ -1.35
PRKACB-209	ENST00000413538	PRR23C	Q6ZRP0	262 aa		6.59	□□□□□ -1.35
PRKACB-209	ENST00000413538	KRT26	Q7Z3Y9	468 aa		6.59	□□□□□ -1.35
PRKACB-209	ENST00000413538	PIWIL2	Q8TC59	973 aa	Known RBP	6.59	□□□□□ -1.35
PRKACB-209	ENST00000413538	CCDC140	Q96MF4	163 aa		6.59	□□□□□ -1.35
PRKACB-209	ENST00000413538	C7orf69	Q9H7B7	122 aa		6.59	□□□□□ -1.35
PRKACB-209	ENST00000413538	KCNH3	Q9ULD8	1083 aa		6.59	□□□□□ -1.35
PRKACB-209	ENST00000413538	HMX2	A2RU54	273 aa		6.58	□□□□□ -1.36
PRKACB-209	ENST00000413538	PRODH	O43272	600 aa		6.58	□□□□□ -1.36
PRKACB-209	ENST00000413538	DLX3	O60479	287 aa		6.58	□□□□□ -1.36
PRKACB-209	ENST00000413538	IBSP	P21815	317 aa	Predicted RBP	6.58	□□□□□ -1.36
PRKACB-209	ENST00000413538	HOXC12	P31275	282 aa		6.58	□□□□□ -1.36
PRKACB-209	ENST00000413538	SUMO1	P63165	101 aa	Known RBP	6.58	□□□□□ -1.36
PRKACB-209	ENST00000413538	CYP4F3	Q08477	520 aa		6.58	□□□□□ -1.36
PRKACB-209	ENST00000413538	TRIM61	Q5EBN2	209 aa		6.58	□□□□□ -1.36
PRKACB-209	ENST00000413538	GTF2IRD2B	Q6EKJ0	949 aa		6.58	□□□□□ -1.36
PRKACB-209	ENST00000413538	TMC3	Q7Z5M5	1100 aa		6.58	□□□□□ -1.36
PRKACB-209	ENST00000413538	GTF2IRD2	Q86UP8	949 aa		6.58	□□□□□ -1.36
PRKACB-209	ENST00000413538	FIBCD1	Q8N539	461 aa		6.58	□□□□□ -1.36
PRKACB-209	ENST00000413538	ADCY4	Q8NFM4	1077 aa		6.58	□□□□□ -1.36
PRKACB-209	ENST00000413538	BTN2A2	Q8WVV5	523 aa		6.58	□□□□□ -1.36
PRKACB-209	ENST00000413538	BRF1	Q92994	677 aa		6.58	□□□□□ -1.36
PRKACB-209	ENST00000413538	PPP1R14A	Q96A00	147 aa		6.58	□□□□□ -1.36
PRKACB-209	ENST00000413538	TBC1D32	Q96NH3	1257 aa		6.58	□□□□□ -1.36
PRKACB-209	ENST00000413538	CLUHP3	Q96NS8	147 aa		6.58	□□□□□ -1.36
PRKACB-209	ENST00000413538	GPR62	Q9BZJ7	368 aa		6.58	□□□□□ -1.36
PRKACB-209	ENST00000413538	CYP26B1	Q9NR63	512 aa		6.58	□□□□□ -1.36
PRKACB-209	ENST00000413538	TPSG1	Q9NRR2	321 aa		6.58	□□□□□ -1.36
PRKACB-209	ENST00000413538	GFOD1	Q9NXC2	390 aa		6.58	□□□□□ -1.36
PRKACB-209	ENST00000413538	GTF2IRD1	Q9UHL9	959 aa		6.58	□□□□□ -1.36
PRKACB-209	ENST00000413538	CAPN6	Q9Y6Q1	641 aa		6.58	□□□□□ -1.36
PRKACB-209	ENST00000413538		A0A087X0B3	334 aa		6.57	□□□□□ -1.36
PRKACB-209	ENST00000413538	ITGB2	P05107	769 aa		6.57	□□□□□ -1.36
PRKACB-209	ENST00000413538	C6orf222	P0C671	652 aa	Predicted RBP	6.57	□□□□□ -1.36
PRKACB-209	ENST00000413538	GFRA1	P56159	465 aa		6.57	□□□□□ -1.36
PRKACB-209	ENST00000413538	IGBP1	P78318	339 aa		6.57	□□□□□ -1.36
PRKACB-209	ENST00000413538	AMPD3	Q01432	767 aa		6.57	□□□□□ -1.36
PRKACB-209	ENST00000413538	TNK2	Q07912	1038 aa		6.57	□□□□□ -1.36
PRKACB-209	ENST00000413538	MAP4K2	Q12851	820 aa		6.57	□□□□□ -1.36
PRKACB-209	ENST00000413538	CYP27C1	Q4G0S4	372 aa		6.57	□□□□□ -1.36
PRKACB-209	ENST00000413538	NIM1K	Q8IY84	436 aa		6.57	□□□□□ -1.36
PRKACB-209	ENST00000413538	SHISA5	Q8N114	240 aa		6.57	□□□□□ -1.36
PRKACB-209	ENST00000413538	MFSD3	Q96ES6	412 aa		6.57	□□□□□ -1.36
PRKACB-209	ENST00000413538	C1orf159	Q96HA4	380 aa		6.57	□□□□□ -1.36
PRKACB-209	ENST00000413538	IPO9	Q96P70	1041 aa	Known RBP	6.57	□□□□□ -1.36
PRKACB-209	ENST00000413538	IER2	Q9BTL4	223 aa		6.57	□□□□□ -1.36
PRKACB-209	ENST00000413538	NKX2-4	Q9H2Z4	354 aa		6.57	□□□□□ -1.36
PRKACB-209	ENST00000413538	NOL6	Q9H6R4	1146 aa	Known RBP	6.57	□□□□□ -1.36
PRKACB-209	ENST00000413538	CHST7	Q9NS84	486 aa		6.57	□□□□□ -1.36
PRKACB-209	ENST00000413538	SF3B6	Q9Y3B4	125 aa	Known RBP	6.57	□□□□□ -1.36
PRKACB-209	ENST00000413538	hCG_2014768	A0A024R1R8	64 aa		6.56	□□□□□ -1.36
PRKACB-209	ENST00000413538	PRR33	A8MZF0	331 aa		6.56	□□□□□ -1.36
PRKACB-209	ENST00000413538	KCNH1	O95259	989 aa		6.56	□□□□□ -1.36
PRKACB-209	ENST00000413538	RAPGEF3	O95398	923 aa		6.56	□□□□□ -1.36
PRKACB-209	ENST00000413538	PRAMEF1	O95521	474 aa		6.56	□□□□□ -1.36
PRKACB-209	ENST00000413538	CYP27A1	Q02318	531 aa		6.56	□□□□□ -1.36
PRKACB-209	ENST00000413538	NMI	Q13287	307 aa	Predicted RBP	6.56	□□□□□ -1.36
PRKACB-209	ENST00000413538	C21orf62-AS1	Q17RA5	79 aa		6.56	□□□□□ -1.36
PRKACB-209	ENST00000413538	SLC35F1	Q5T1Q4	408 aa		6.56	□□□□□ -1.36
PRKACB-209	ENST00000413538	RNF43	Q68DV7	783 aa		6.56	□□□□□ -1.36
PRKACB-209	ENST00000413538	DAGLB	Q8NCG7	672 aa		6.56	□□□□□ -1.36
PRKACB-209	ENST00000413538	HDAC8	Q9BY41	377 aa		6.56	□□□□□ -1.36
PRKACB-209	ENST00000413538	DUSP15	Q9H1R2	295 aa	Predicted RBP	6.56	□□□□□ -1.36
PRKACB-209	ENST00000413538	CBX7	O95931	251 aa		6.55	□□□□□ -1.36
PRKACB-209	ENST00000413538	GSN	P06396	782 aa		6.55	□□□□□ -1.36
PRKACB-209	ENST00000413538	CTSK	P43235	329 aa		6.55	□□□□□ -1.36
PRKACB-209	ENST00000413538	DOC2B	Q14184	412 aa		6.55	□□□□□ -1.36
PRKACB-209	ENST00000413538	PPP2R5D	Q14738	602 aa		6.55	□□□□□ -1.36
PRKACB-209	ENST00000413538	SF1	Q15637	639 aa	Known RBP	6.55	□□□□□ -1.36
PRKACB-209	ENST00000413538	NTRK3	Q16288	839 aa		6.55	□□□□□ -1.36
PRKACB-209	ENST00000413538	THNSL2	Q86YJ6	484 aa		6.55	□□□□□ -1.36
PRKACB-209	ENST00000413538	DHX37	Q8IY37	1157 aa	Known RBP	6.55	□□□□□ -1.36
PRKACB-209	ENST00000413538	ZNF655	Q8N720	491 aa	Predicted RBP	6.55	□□□□□ -1.36
PRKACB-209	ENST00000413538	KREMEN2	Q8NCW0	462 aa		6.55	□□□□□ -1.36
PRKACB-209	ENST00000413538	GSTCD	Q8NEC7	633 aa		6.55	□□□□□ -1.36
PRKACB-209	ENST00000413538	KCTD13	Q8WZ19	329 aa		6.55	□□□□□ -1.36
PRKACB-209	ENST00000413538	MFSD14A	Q96MC6	490 aa		6.55	□□□□□ -1.36
PRKACB-209	ENST00000413538	MKNK2	Q9HBH9	465 aa		6.55	□□□□□ -1.36
PRKACB-209	ENST00000413538	INTS7	Q9NVH2	962 aa	Known RBP	6.55	□□□□□ -1.36
PRKACB-209	ENST00000413538	SHISA3	A0PJX4	238 aa		6.54	□□□□□ -1.36
PRKACB-209	ENST00000413538	FAM170B	A6NMN3	283 aa		6.54	□□□□□ -1.36
PRKACB-209	ENST00000413538		H0Y8X5	98 aa		6.54	□□□□□ -1.36
PRKACB-209	ENST00000413538	GSC2	O15499	205 aa		6.54	□□□□□ -1.36
PRKACB-209	ENST00000413538	VAMP4	O75379	141 aa		6.54	□□□□□ -1.36
PRKACB-209	ENST00000413538	CP	P00450	1065 aa		6.54	□□□□□ -1.36
PRKACB-209	ENST00000413538	F13B	P05160	661 aa		6.54	□□□□□ -1.36
PRKACB-209	ENST00000413538	H2AFB1	P0C5Y9	115 aa		6.54	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms