RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 FOCADQ5VW36 1801 aa14.75□□□□□ -0.05
LITAF-203ENST00000413364 PALM3A6NDB9 673 aaPredicted RBP14.75□□□□□ -0.05
LITAF-203ENST00000413364 SSR1P43307 286 aaKnown RBP14.75□□□□□ -0.05
LITAF-203ENST00000413364 TRAPPC10P48553 1259 aa14.75□□□□□ -0.05
LITAF-203ENST00000413364 GYS2P54840 703 aa14.75□□□□□ -0.05
LITAF-203ENST00000413364 MDM2Q00987 491 aaPredicted RBP14.75□□□□□ -0.05
LITAF-203ENST00000413364 DOK7Q18PE1 504 aa14.75□□□□□ -0.05
LITAF-203ENST00000413364 TTC38Q5R3I4 469 aa14.75□□□□□ -0.05
LITAF-203ENST00000413364 MSL1Q68DK7 614 aa14.75□□□□□ -0.05
LITAF-203ENST00000413364 DRC1Q96MC2 740 aa14.75□□□□□ -0.05
LITAF-203ENST00000413364 LZTS2Q9BRK4 669 aa14.75□□□□□ -0.05
LITAF-203ENST00000413364 CSRNP2Q9H175 543 aa14.75□□□□□ -0.05
LITAF-203ENST00000413364 MYH1P12882 1939 aa14.74□□□□□ -0.05
LITAF-203ENST00000413364 PTGS1P23219 599 aa14.74□□□□□ -0.05
LITAF-203ENST00000413364 RNF217Q8TC41 542 aa14.74□□□□□ -0.05
LITAF-203ENST00000413364 FERMT2Q96AC1 680 aa14.74□□□□□ -0.05
LITAF-203ENST00000413364 CLIP2Q9UDT6 1046 aa14.74□□□□□ -0.05
LITAF-203ENST00000413364 TTF2Q9UNY4 1162 aaKnown RBP14.74□□□□□ -0.05
LITAF-203ENST00000413364 NOVP48745 357 aa14.73□□□□□ -0.05
LITAF-203ENST00000413364 ZSCAN26Q16670 478 aa14.73□□□□□ -0.05
LITAF-203ENST00000413364 SLC35G1Q2M3R5 365 aa14.73□□□□□ -0.05
LITAF-203ENST00000413364 SH3BP1Q9Y3L3 701 aa14.73□□□□□ -0.05
LITAF-203ENST00000413364 TNS1Q9HBL0 1735 aaKnown RBP14.73□□□□□ -0.05
LITAF-203ENST00000413364 RGPD3A6NKT7 1758 aaPredicted RBP14.73□□□□□ -0.05
LITAF-203ENST00000413364 RGPD4Q7Z3J3 1758 aa14.73□□□□□ -0.05
LITAF-203ENST00000413364 F8W031 263 aaPredicted RBP14.73□□□□□ -0.05
LITAF-203ENST00000413364 G3V3G9 751 aa14.73□□□□□ -0.05
LITAF-203ENST00000413364 WNT7AO00755 349 aa14.73□□□□□ -0.05
LITAF-203ENST00000413364 PPP1R12AO14974 1030 aaPredicted RBP14.73□□□□□ -0.05
LITAF-203ENST00000413364 TRIM66O15016 1216 aa14.73□□□□□ -0.05
LITAF-203ENST00000413364 POLR2DO15514 142 aaKnown RBP14.73□□□□□ -0.05
LITAF-203ENST00000413364 TOP1P11387 765 aaKnown RBP14.73□□□□□ -0.05
LITAF-203ENST00000413364 ZNF174Q15697 407 aa14.73□□□□□ -0.05
LITAF-203ENST00000413364 DCAF8Q5TAQ9 597 aa14.73□□□□□ -0.05
LITAF-203ENST00000413364 STYK1Q6J9G0 422 aa14.73□□□□□ -0.05
LITAF-203ENST00000413364 CCDC186Q7Z3E2 898 aa14.73□□□□□ -0.05
LITAF-203ENST00000413364 C2CD5Q86YS7 1000 aa14.73□□□□□ -0.05
LITAF-203ENST00000413364 PYCARDQ9ULZ3 195 aa14.73□□□□□ -0.05
LITAF-203ENST00000413364 KIF3CO14782 793 aa14.72□□□□□ -0.05
LITAF-203ENST00000413364 IRF6O14896 467 aa14.72□□□□□ -0.05
LITAF-203ENST00000413364 IKBKBO14920 756 aa14.72□□□□□ -0.05
LITAF-203ENST00000413364 MAGEA9P43362 315 aa14.72□□□□□ -0.05
LITAF-203ENST00000413364 NBPF9Q3BBW0 867 aa14.72□□□□□ -0.05
LITAF-203ENST00000413364 PIK3AP1Q6ZUJ8 805 aa14.72□□□□□ -0.05
LITAF-203ENST00000413364 FOXP4Q8IVH2 680 aaPredicted RBP14.72□□□□□ -0.05
LITAF-203ENST00000413364 BLIDQ8IZY5 108 aa14.72□□□□□ -0.05
LITAF-203ENST00000413364 FAM177A1Q8N128 213 aaPredicted RBP14.72□□□□□ -0.05
LITAF-203ENST00000413364 GOLGA5Q8TBA6 731 aa14.72□□□□□ -0.05
LITAF-203ENST00000413364 MXD3Q9BW11 206 aa14.72□□□□□ -0.05
LITAF-203ENST00000413364 SERTAD1Q9UHV2 236 aa14.72□□□□□ -0.05
LITAF-203ENST00000413364 PCDHA4Q9UN74 947 aa14.72□□□□□ -0.05
LITAF-203ENST00000413364 PCDHA5Q9Y5H7 936 aa14.72□□□□□ -0.05
LITAF-203ENST00000413364 PLIN4Q96Q06 1357 aa14.72□□□□□ -0.05
LITAF-203ENST00000413364 BAZ2BQ9UIF8 2168 aaKnown RBP14.72□□□□□ -0.05
LITAF-203ENST00000413364 ACTN4O43707 911 aaKnown RBP14.72□□□□□ -0.05
LITAF-203ENST00000413364 CYTH3O43739 400 aa14.72□□□□□ -0.05
LITAF-203ENST00000413364 ATP2C1P98194 919 aaPredicted RBP14.72□□□□□ -0.05
LITAF-203ENST00000413364 GABPAQ06546 454 aa14.72□□□□□ -0.05
LITAF-203ENST00000413364 PICALMQ13492 652 aa14.72□□□□□ -0.05
LITAF-203ENST00000413364 NCAPHQ15003 741 aa14.72□□□□□ -0.05
LITAF-203ENST00000413364 POSTNQ15063 836 aa14.72□□□□□ -0.05
LITAF-203ENST00000413364 KANK3Q6NY19 840 aa14.72□□□□□ -0.05
LITAF-203ENST00000413364 HHIPL2Q6UWX4 724 aa14.72□□□□□ -0.05
LITAF-203ENST00000413364 USP49Q70CQ1 688 aa14.72□□□□□ -0.05
LITAF-203ENST00000413364 GPKOWQ92917 476 aaPredicted RBP eCLIP14.72□□□□□ -0.05
LITAF-203ENST00000413364 CEP95Q96GE4 821 aa14.72□□□□□ -0.05
LITAF-203ENST00000413364 SPZ1Q9BXG8 430 aa14.72□□□□□ -0.05
LITAF-203ENST00000413364 NRBP1Q9UHY1 535 aa14.72□□□□□ -0.05
LITAF-203ENST00000413364 KLRF2D3W0D1 207 aa14.71□□□□□ -0.05
LITAF-203ENST00000413364 FOXN1O15353 648 aa14.71□□□□□ -0.05
LITAF-203ENST00000413364 TNNT1P13805 278 aa14.71□□□□□ -0.05
LITAF-203ENST00000413364 ISM2Q6H9L7 571 aa14.71□□□□□ -0.05
LITAF-203ENST00000413364 GALNT17Q6IS24 598 aa14.71□□□□□ -0.05
LITAF-203ENST00000413364 DAGLBQ8NCG7 672 aa14.71□□□□□ -0.05
LITAF-203ENST00000413364 CCDC148Q8NFR7 591 aa14.71□□□□□ -0.05
LITAF-203ENST00000413364 ERO1AQ96HE7 468 aa14.71□□□□□ -0.05
LITAF-203ENST00000413364 CEP89Q96ST8 783 aa14.71□□□□□ -0.05
LITAF-203ENST00000413364 USP40Q9NVE5 1235 aa14.71□□□□□ -0.05
LITAF-203ENST00000413364 MTMR7Q9Y216 660 aa14.71□□□□□ -0.05
LITAF-203ENST00000413364 RRP15Q9Y3B9 282 aaKnown RBP14.71□□□□□ -0.05
LITAF-203ENST00000413364 H0YIN7 160 aa14.71□□□□□ -0.06
LITAF-203ENST00000413364 ADAMTS3O15072 1205 aa14.71□□□□□ -0.06
LITAF-203ENST00000413364 PARP1P09874 1014 aaKnown RBP14.71□□□□□ -0.06
LITAF-203ENST00000413364 PTGDRQ13258 359 aa14.71□□□□□ -0.06
LITAF-203ENST00000413364 LRCH2Q5VUJ6 765 aa14.71□□□□□ -0.06
LITAF-203ENST00000413364 WWC2Q6AWC2 1192 aa14.71□□□□□ -0.06
LITAF-203ENST00000413364 PODNQ7Z5L7 613 aa14.71□□□□□ -0.06
LITAF-203ENST00000413364 TEKT1Q969V4 418 aa14.71□□□□□ -0.06
LITAF-203ENST00000413364 DDX4Q9NQI0 724 aaKnown RBP14.71□□□□□ -0.06
LITAF-203ENST00000413364 M0R2N6 131 aa14.7□□□□□ -0.06
LITAF-203ENST00000413364 STXBP3O00186 592 aa14.7□□□□□ -0.06
LITAF-203ENST00000413364 SMARCA1P28370 1054 aa14.7□□□□□ -0.06
LITAF-203ENST00000413364 SCNN1DP51172 638 aa14.7□□□□□ -0.06
LITAF-203ENST00000413364 NT5DC1Q5TFE4 455 aa14.7□□□□□ -0.06
LITAF-203ENST00000413364 TYW1BQ6NUM6 668 aa14.7□□□□□ -0.06
LITAF-203ENST00000413364 FBXO38Q6PIJ6 1188 aa14.7□□□□□ -0.06
LITAF-203ENST00000413364 SGSM3Q96HU1 749 aa14.7□□□□□ -0.06
LITAF-203ENST00000413364 BARHL2Q9NY43 387 aa14.7□□□□□ -0.06
LITAF-203ENST00000413364 CCDC189A1A4V9 331 aa14.69□□□□□ -0.06
LITAF-203ENST00000413364 GOLGA8HP0CJ92 632 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms