RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 SYF2O95926 243 aaKnown RBP19.8■□□□□ 0.76
SDCBP-202ENST00000413219 MAGEA9P43362 315 aa19.8■□□□□ 0.76
SDCBP-202ENST00000413219 TNNT3P45378 269 aaPredicted RBP19.8■□□□□ 0.76
SDCBP-202ENST00000413219 HERVK_113P62684 666 aa19.8■□□□□ 0.76
SDCBP-202ENST00000413219 hCG_1642624A0A1W2PR95 340 aa19.8■□□□□ 0.76
SDCBP-202ENST00000413219 ANO9A1A5B4 782 aa19.8■□□□□ 0.76
SDCBP-202ENST00000413219 KRT86O43790 486 aa19.8■□□□□ 0.76
SDCBP-202ENST00000413219 KCNB1Q14721 858 aa19.8■□□□□ 0.76
SDCBP-202ENST00000413219 IL17AQ16552 155 aa19.8■□□□□ 0.76
SDCBP-202ENST00000413219 CCDC122Q5T0U0 273 aa19.8■□□□□ 0.76
SDCBP-202ENST00000413219 NOC3LQ8WTT2 800 aaKnown RBP19.8■□□□□ 0.76
SDCBP-202ENST00000413219 COG1Q8WTW3 980 aa19.8■□□□□ 0.76
SDCBP-202ENST00000413219 MMS19Q96T76 1030 aa19.8■□□□□ 0.76
SDCBP-202ENST00000413219 BRIP1Q9BX63 1249 aa19.8■□□□□ 0.76
SDCBP-202ENST00000413219 TRIM10Q9UDY6 481 aa19.8■□□□□ 0.76
SDCBP-202ENST00000413219 MYL1P05976 194 aa19.79■□□□□ 0.76
SDCBP-202ENST00000413219 CYLC1P35663 651 aaPredicted RBP19.79■□□□□ 0.76
SDCBP-202ENST00000413219 WDR59Q6PJI9 974 aa19.79■□□□□ 0.76
SDCBP-202ENST00000413219 SDR42E1Q8WUS8 393 aa19.79■□□□□ 0.76
SDCBP-202ENST00000413219 SOS2Q07890 1332 aaPredicted RBP19.79■□□□□ 0.76
SDCBP-202ENST00000413219 ZC3H4Q9UPT8 1303 aaKnown RBP19.79■□□□□ 0.76
SDCBP-202ENST00000413219 SNAP23O00161 211 aa19.79■□□□□ 0.76
SDCBP-202ENST00000413219 PHACTR2O75167 634 aa19.79■□□□□ 0.76
SDCBP-202ENST00000413219 PPFIA4O75335 1185 aa19.79■□□□□ 0.76
SDCBP-202ENST00000413219 ATP1A1P05023 1023 aaKnown RBP19.79■□□□□ 0.76
SDCBP-202ENST00000413219 IL6STP40189 918 aaPredicted RBP19.79■□□□□ 0.76
SDCBP-202ENST00000413219 DNM2P50570 870 aa19.79■□□□□ 0.76
SDCBP-202ENST00000413219 DZIP3Q86Y13 1208 aaKnown RBP19.79■□□□□ 0.76
SDCBP-202ENST00000413219 RETREG2Q8NC44 543 aa19.79■□□□□ 0.76
SDCBP-202ENST00000413219 NUP58Q9BVL2 599 aa19.79■□□□□ 0.76
SDCBP-202ENST00000413219 ZBTB1Q9Y2K1 713 aa19.79■□□□□ 0.76
SDCBP-202ENST00000413219 GDAQ9Y2T3 454 aa19.79■□□□□ 0.76
SDCBP-202ENST00000413219 MYH13Q9UKX3 1938 aa19.78■□□□□ 0.76
SDCBP-202ENST00000413219 SCG2P13521 617 aa19.78■□□□□ 0.76
SDCBP-202ENST00000413219 STIM1Q13586 685 aa19.78■□□□□ 0.76
SDCBP-202ENST00000413219 IQCEQ6IPM2 695 aa19.78■□□□□ 0.76
SDCBP-202ENST00000413219 FOXR1Q6PIV2 292 aa19.78■□□□□ 0.76
SDCBP-202ENST00000413219 PIK3AP1Q6ZUJ8 805 aa19.78■□□□□ 0.76
SDCBP-202ENST00000413219 CCDC170Q8IYT3 715 aa19.78■□□□□ 0.76
SDCBP-202ENST00000413219 RIOK1Q9BRS2 568 aaKnown RBP19.78■□□□□ 0.76
SDCBP-202ENST00000413219 NLRP5P59047 1200 aa19.77■□□□□ 0.76
SDCBP-202ENST00000413219 ADGRA1Q86SQ6 560 aa19.77■□□□□ 0.76
SDCBP-202ENST00000413219 C4orf32Q8N8J7 132 aa19.77■□□□□ 0.76
SDCBP-202ENST00000413219 RUBCNQ92622 972 aa19.77■□□□□ 0.76
SDCBP-202ENST00000413219 JAKMIP2Q96AA8 810 aa19.77■□□□□ 0.76
SDCBP-202ENST00000413219 HDAC6Q9UBN7 1215 aa19.77■□□□□ 0.76
SDCBP-202ENST00000413219 EIF3CLB5ME19 914 aaKnown RBP19.77■□□□□ 0.75
SDCBP-202ENST00000413219 ENC1O14682 589 aa19.77■□□□□ 0.75
SDCBP-202ENST00000413219 SRGNP10124 158 aa19.77■□□□□ 0.75
SDCBP-202ENST00000413219 CALML3P27482 149 aa19.77■□□□□ 0.75
SDCBP-202ENST00000413219 MCM7P33993 719 aa19.77■□□□□ 0.75
SDCBP-202ENST00000413219 STAT6P42226 847 aa19.77■□□□□ 0.75
SDCBP-202ENST00000413219 CORO7P57737 925 aa19.77■□□□□ 0.75
SDCBP-202ENST00000413219 TMED8Q6PL24 325 aaPredicted RBP19.77■□□□□ 0.75
SDCBP-202ENST00000413219 KIAA1328Q86T90 577 aa19.77■□□□□ 0.75
SDCBP-202ENST00000413219 SRBD1Q8N5C6 995 aaKnown RBP19.77■□□□□ 0.75
SDCBP-202ENST00000413219 EIF3CQ99613 913 aaKnown RBP19.77■□□□□ 0.75
SDCBP-202ENST00000413219 MAGEC2Q9UBF1 373 aaPredicted RBP19.77■□□□□ 0.75
SDCBP-202ENST00000413219 RREB1Q92766 1687 aa19.77■□□□□ 0.75
SDCBP-202ENST00000413219 SLIT2O94813 1529 aa19.76■□□□□ 0.75
SDCBP-202ENST00000413219 IGHMBP2P38935 993 aaKnown RBP19.76■□□□□ 0.75
SDCBP-202ENST00000413219 PFKFB3Q16875 520 aaPredicted RBP19.76■□□□□ 0.75
SDCBP-202ENST00000413219 SLC4A9Q96Q91 983 aa19.76■□□□□ 0.75
SDCBP-202ENST00000413219 PURBQ96QR8 312 aaKnown RBP19.76■□□□□ 0.75
SDCBP-202ENST00000413219 TTYH3Q9C0H2 523 aa19.76■□□□□ 0.75
SDCBP-202ENST00000413219 DISC1Q9NRI5 854 aa19.76■□□□□ 0.75
SDCBP-202ENST00000413219 ZNHIT6Q9NWK9 470 aaKnown RBP19.76■□□□□ 0.75
SDCBP-202ENST00000413219 STRCP1A6NGW2 1772 aa19.76■□□□□ 0.75
SDCBP-202ENST00000413219 CCDC152Q4G0S7 254 aa19.75■□□□□ 0.75
SDCBP-202ENST00000413219 IPO4Q8TEX9 1081 aaKnown RBP19.75■□□□□ 0.75
SDCBP-202ENST00000413219 ZNF804BA4D1E1 1349 aa19.75■□□□□ 0.75
SDCBP-202ENST00000413219 PSMA7O14818 248 aa19.75■□□□□ 0.75
SDCBP-202ENST00000413219 ORC4O43929 436 aa19.75■□□□□ 0.75
SDCBP-202ENST00000413219 SHOX2O60902 331 aaPredicted RBP19.75■□□□□ 0.75
SDCBP-202ENST00000413219 IPO7O95373 1038 aaKnown RBP19.75■□□□□ 0.75
SDCBP-202ENST00000413219 NOP2P46087 812 aaKnown RBP19.75■□□□□ 0.75
SDCBP-202ENST00000413219 CDK17Q00537 523 aa19.75■□□□□ 0.75
SDCBP-202ENST00000413219 CCNI2Q6ZMN8 369 aaPredicted RBP19.75■□□□□ 0.75
SDCBP-202ENST00000413219 CRACR2AQ9BSW2 395 aa19.75■□□□□ 0.75
SDCBP-202ENST00000413219 BCL9O00512 1426 aa19.74■□□□□ 0.75
SDCBP-202ENST00000413219 RHOBTB3O94955 611 aa19.74■□□□□ 0.75
SDCBP-202ENST00000413219 ITGB4P16144 1822 aa19.74■□□□□ 0.75
SDCBP-202ENST00000413219 ZBED6P86452 979 aa19.74■□□□□ 0.75
SDCBP-202ENST00000413219 FNBP4Q8N3X1 1017 aaPredicted RBP19.74■□□□□ 0.75
SDCBP-202ENST00000413219 PPM1EQ8WY54 764 aa19.74■□□□□ 0.75
SDCBP-202ENST00000413219 SMARCC1Q92922 1105 aaPredicted RBP19.74■□□□□ 0.75
SDCBP-202ENST00000413219 MAPK8IP1Q9UQF2 711 aa19.74■□□□□ 0.75
SDCBP-202ENST00000413219 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.74■□□□□ 0.75
SDCBP-202ENST00000413219 TRIM49BA6NDI0 452 aa19.74■□□□□ 0.75
SDCBP-202ENST00000413219 EVA1CP58658 441 aa19.74■□□□□ 0.75
SDCBP-202ENST00000413219 ITIH3Q06033 890 aa19.74■□□□□ 0.75
SDCBP-202ENST00000413219 CCDC70Q6NSX1 233 aa19.74■□□□□ 0.75
SDCBP-202ENST00000413219 TTI2Q6NXR4 508 aa19.74■□□□□ 0.75
SDCBP-202ENST00000413219 GIMAP8Q8ND71 665 aaPredicted RBP19.74■□□□□ 0.75
SDCBP-202ENST00000413219 IQCDQ96DY2 449 aa19.74■□□□□ 0.75
SDCBP-202ENST00000413219 DHTKD1Q96HY7 919 aaPredicted RBP19.74■□□□□ 0.75
SDCBP-202ENST00000413219 TRIM47Q96LD4 638 aa19.74■□□□□ 0.75
SDCBP-202ENST00000413219 TSGA10Q9BZW7 698 aa19.74■□□□□ 0.75
SDCBP-202ENST00000413219 SH3GLB2Q9NR46 395 aa19.74■□□□□ 0.75
SDCBP-202ENST00000413219 EXOC1Q9NV70 894 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms