RNA–Protein interactions for RNA: ENST00000412738.5

RBM39-207, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-207ENST00000412738 SLC1A4P43007 532 aa16.3■□□□□ 0.2
RBM39-207ENST00000412738 MNX1P50219 401 aaPredicted RBP16.3■□□□□ 0.2
RBM39-207ENST00000412738 ALX1Q15699 326 aa16.3■□□□□ 0.2
RBM39-207ENST00000412738 PLEKHM2Q8IWE5 1019 aa16.3■□□□□ 0.2
RBM39-207ENST00000412738 REPS2Q8NFH8 660 aa16.3■□□□□ 0.2
RBM39-207ENST00000412738 OSBPL3Q9H4L5 887 aa16.3■□□□□ 0.2
RBM39-207ENST00000412738 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.3■□□□□ 0.2
RBM39-207ENST00000412738 CCDC171Q6TFL3 1326 aa16.29■□□□□ 0.2
RBM39-207ENST00000412738 TMEM232C9JQI7 657 aa16.29■□□□□ 0.2
RBM39-207ENST00000412738 PGK2P07205 417 aa16.29■□□□□ 0.2
RBM39-207ENST00000412738 FDX1P10109 184 aa16.29■□□□□ 0.2
RBM39-207ENST00000412738 SDSP20132 328 aa16.29■□□□□ 0.2
RBM39-207ENST00000412738 STAT2P52630 851 aa16.29■□□□□ 0.2
RBM39-207ENST00000412738 RRP12Q5JTH9 1297 aaKnown RBP16.29■□□□□ 0.2
RBM39-207ENST00000412738 CHURC1Q8WUH1 139 aa16.29■□□□□ 0.2
RBM39-207ENST00000412738 DDX11Q96FC9 970 aa16.29■□□□□ 0.2
RBM39-207ENST00000412738 INCENPQ9NQS7 918 aa16.29■□□□□ 0.2
RBM39-207ENST00000412738 DIS3Q9Y2L1 958 aaKnown RBP16.29■□□□□ 0.2
RBM39-207ENST00000412738 PFASO15067 1338 aa16.28■□□□□ 0.2
RBM39-207ENST00000412738 HIP1O00291 1037 aa16.28■□□□□ 0.2
RBM39-207ENST00000412738 ATP2A1O14983 1001 aa16.28■□□□□ 0.2
RBM39-207ENST00000412738 SEPT4O43236 478 aa16.28■□□□□ 0.2
RBM39-207ENST00000412738 MYCNP04198 464 aaPredicted RBP16.28■□□□□ 0.2
RBM39-207ENST00000412738 MCCP23508 829 aa16.28■□□□□ 0.2
RBM39-207ENST00000412738 ZNF589Q86UQ0 364 aaPredicted RBP16.28■□□□□ 0.2
RBM39-207ENST00000412738 FAM160B2Q86V87 743 aa16.28■□□□□ 0.2
RBM39-207ENST00000412738 ARRDC4Q8NCT1 418 aa16.28■□□□□ 0.2
RBM39-207ENST00000412738 TRPV1Q8NER1 839 aa16.28■□□□□ 0.2
RBM39-207ENST00000412738 CHMP4CQ96CF2 233 aa16.28■□□□□ 0.2
RBM39-207ENST00000412738 TINF2Q9BSI4 451 aa16.28■□□□□ 0.2
RBM39-207ENST00000412738 SENP6Q9GZR1 1112 aaPredicted RBP16.28■□□□□ 0.2
RBM39-207ENST00000412738 SLC38A10Q9HBR0 1119 aa16.28■□□□□ 0.2
RBM39-207ENST00000412738 RAVER2Q9HCJ3 691 aaKnown RBP16.28■□□□□ 0.2
RBM39-207ENST00000412738 DIAPH3Q9NSV4 1193 aa16.28■□□□□ 0.2
RBM39-207ENST00000412738 RBM27Q9P2N5 1060 aaKnown RBP16.28■□□□□ 0.2
RBM39-207ENST00000412738 CEP290O15078 2479 aa16.28■□□□□ 0.2
RBM39-207ENST00000412738 ZMYM6O95789 1325 aa16.27■□□□□ 0.2
RBM39-207ENST00000412738 DNM1LO00429 736 aa16.27■□□□□ 0.2
RBM39-207ENST00000412738 ORC4O43929 436 aa16.27■□□□□ 0.2
RBM39-207ENST00000412738 IGHA2P01877 340 aa16.27■□□□□ 0.2
RBM39-207ENST00000412738 COL6A1P12109 1028 aa16.27■□□□□ 0.2
RBM39-207ENST00000412738 OAZ1P54368 228 aa16.27■□□□□ 0.2
RBM39-207ENST00000412738 ZNF792Q3KQV3 632 aa16.27■□□□□ 0.2
RBM39-207ENST00000412738 PRAMEF19Q5SWL8 479 aa16.27■□□□□ 0.2
RBM39-207ENST00000412738 ANO1Q5XXA6 986 aa16.27■□□□□ 0.2
RBM39-207ENST00000412738 CWC27Q6UX04 472 aaKnown RBP16.27■□□□□ 0.2
RBM39-207ENST00000412738 MFSD6Q6ZSS7 791 aa16.27■□□□□ 0.2
RBM39-207ENST00000412738 ANKRD35Q8N283 1001 aa16.27■□□□□ 0.2
RBM39-207ENST00000412738 STAG1Q8WVM7 1258 aa16.27■□□□□ 0.2
RBM39-207ENST00000412738 GMCL1Q96IK5 515 aa16.27■□□□□ 0.2
RBM39-207ENST00000412738 IL17RBQ9NRM6 502 aa16.27■□□□□ 0.2
RBM39-207ENST00000412738 FBXO40Q9UH90 709 aa16.27■□□□□ 0.2
RBM39-207ENST00000412738 NRBP1Q9UHY1 535 aa16.27■□□□□ 0.2
RBM39-207ENST00000412738 ZMYND8Q9ULU4 1186 aaPredicted RBP16.27■□□□□ 0.2
RBM39-207ENST00000412738 MTMR7Q9Y216 660 aa16.27■□□□□ 0.2
RBM39-207ENST00000412738 RIPK3Q9Y572 518 aa16.27■□□□□ 0.2
RBM39-207ENST00000412738 ZNFX1Q9P2E3 1918 aaKnown RBP16.27■□□□□ 0.19
RBM39-207ENST00000412738 KBTBD13C9JR72 458 aa16.26■□□□□ 0.19
RBM39-207ENST00000412738 NMT2O60551 498 aa16.26■□□□□ 0.19
RBM39-207ENST00000412738 HAND2P61296 217 aa16.26■□□□□ 0.19
RBM39-207ENST00000412738 CHST13Q8NET6 341 aa16.26■□□□□ 0.19
RBM39-207ENST00000412738 RNF41Q9H4P4 317 aaPredicted RBP16.26■□□□□ 0.19
RBM39-207ENST00000412738 CNPY2Q9Y2B0 182 aa16.26■□□□□ 0.19
RBM39-207ENST00000412738 FRMPD3Q5JV73 1810 aa16.26■□□□□ 0.19
RBM39-207ENST00000412738 ZNF213O14771 459 aa16.25■□□□□ 0.19
RBM39-207ENST00000412738 FGRP09769 529 aa16.25■□□□□ 0.19
RBM39-207ENST00000412738 RARBP10826 455 aa16.25■□□□□ 0.19
RBM39-207ENST00000412738 PCP11498 1178 aaKnown RBP16.25■□□□□ 0.19
RBM39-207ENST00000412738 FXR1P51114 621 aaKnown RBP eCLIP16.25■□□□□ 0.19
RBM39-207ENST00000412738 CCDC96Q2M329 555 aa16.25■□□□□ 0.19
RBM39-207ENST00000412738 GJC2Q5T442 439 aaPredicted RBP16.25■□□□□ 0.19
RBM39-207ENST00000412738 RCSD1Q6JBY9 416 aa16.25■□□□□ 0.19
RBM39-207ENST00000412738 KCTD1Q719H9 257 aa16.25■□□□□ 0.19
RBM39-207ENST00000412738 PIAS4Q8N2W9 510 aaPredicted RBP16.25■□□□□ 0.19
RBM39-207ENST00000412738 MSL3Q8N5Y2 521 aaKnown RBP16.25■□□□□ 0.19
RBM39-207ENST00000412738 HOMER2Q9NSB8 354 aa16.25■□□□□ 0.19
RBM39-207ENST00000412738 ALPK3Q96L96 1907 aa16.25■□□□□ 0.19
RBM39-207ENST00000412738 RANBP2P49792 3224 aaKnown RBP16.24■□□□□ 0.19
RBM39-207ENST00000412738 PLA2G6O60733 806 aa16.24■□□□□ 0.19
RBM39-207ENST00000412738 SYN1P17600 705 aa16.24■□□□□ 0.19
RBM39-207ENST00000412738 LRRC26Q2I0M4 334 aa16.24■□□□□ 0.19
RBM39-207ENST00000412738 AKNAD1Q5T1N1 836 aa16.24■□□□□ 0.19
RBM39-207ENST00000412738 DCAF4Q8WV16 495 aa16.24■□□□□ 0.19
RBM39-207ENST00000412738 PLXNA1Q9UIW2 1896 aa16.24■□□□□ 0.19
RBM39-207ENST00000412738 DNAH12Q6ZR08 3092 aa16.24■□□□□ 0.19
RBM39-207ENST00000412738 TOP1P11387 765 aaKnown RBP16.23■□□□□ 0.19
RBM39-207ENST00000412738 AKR1A1P14550 325 aa16.23■□□□□ 0.19
RBM39-207ENST00000412738 ATN1P54259 1190 aaPredicted RBP16.23■□□□□ 0.19
RBM39-207ENST00000412738 IRX6P78412 446 aaPredicted RBP16.23■□□□□ 0.19
RBM39-207ENST00000412738 ESR2Q92731 530 aa16.23■□□□□ 0.19
RBM39-207ENST00000412738 ACAD9Q9H845 621 aa16.23■□□□□ 0.19
RBM39-207ENST00000412738 TCP11L1Q9NUJ3 509 aa16.23■□□□□ 0.19
RBM39-207ENST00000412738 TACC3Q9Y6A5 838 aa16.23■□□□□ 0.19
RBM39-207ENST00000412738 SYNGAP1Q96PV0 1343 aa16.22■□□□□ 0.19
RBM39-207ENST00000412738 A0A1W2PPC1 479 aa16.22■□□□□ 0.19
RBM39-207ENST00000412738 TKFCQ3LXA3 575 aa16.22■□□□□ 0.19
RBM39-207ENST00000412738 CCDC174Q6PII3 467 aa16.22■□□□□ 0.19
RBM39-207ENST00000412738 RNF180Q86T96 592 aa16.22■□□□□ 0.19
RBM39-207ENST00000412738 TMEM47Q9BQJ4 181 aa16.22■□□□□ 0.19
RBM39-207ENST00000412738 XPNPEP3Q9NQH7 507 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms