RNA–Protein interactions for RNA: ENST00000412714.1

LINC00388-201, long intergenic non-protein coding RNA 388, humanhuman

TSL 5 BASIC

Gene LINC00388, Length 663 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00388-201ENST00000412714 ZNF444Q8N0Y2 327 aaPredicted RBP15.04■□□□□ -0
LINC00388-201ENST00000412714 SLC17A8Q8NDX2 589 aa15.04■□□□□ -0
LINC00388-201ENST00000412714 SLF1Q9BQI6 1058 aa15.04■□□□□ -0
LINC00388-201ENST00000412714 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.04■□□□□ -0
LINC00388-201ENST00000412714 NYAP2Q9P242 653 aa15.04■□□□□ -0
LINC00388-201ENST00000412714 ZNF214Q9UL59 606 aaPredicted RBP15.04■□□□□ -0
LINC00388-201ENST00000412714 CTDP1Q9Y5B0 961 aaPredicted RBP15.04■□□□□ -0
LINC00388-201ENST00000412714 F5H6K3 240 aa15.03■□□□□ -0
LINC00388-201ENST00000412714 ERC2O15083 957 aa15.03■□□□□ -0
LINC00388-201ENST00000412714 PDE1AP54750 535 aa15.03■□□□□ -0
LINC00388-201ENST00000412714 KLRC3Q07444 240 aa15.03■□□□□ -0
LINC00388-201ENST00000412714 LRRC41Q15345 812 aa15.03■□□□□ -0
LINC00388-201ENST00000412714 REPS2Q8NFH8 660 aa15.03■□□□□ -0
LINC00388-201ENST00000412714 NUP88Q99567 741 aaPredicted RBP15.03■□□□□ -0
LINC00388-201ENST00000412714 TINF2Q9BSI4 451 aa15.03■□□□□ -0
LINC00388-201ENST00000412714 TEX13BQ9BXU2 312 aa15.03■□□□□ -0
LINC00388-201ENST00000412714 NACAP1Q9BZK3 213 aa15.03■□□□□ -0
LINC00388-201ENST00000412714 EPB41L4AQ9HCS5 686 aaPredicted RBP15.03■□□□□ -0
LINC00388-201ENST00000412714 PRDM5Q9NQX1 630 aaPredicted RBP15.03■□□□□ -0
LINC00388-201ENST00000412714 CLIP2Q9UDT6 1046 aa15.03■□□□□ -0
LINC00388-201ENST00000412714 DIS3Q9Y2L1 958 aaKnown RBP15.03■□□□□ -0
LINC00388-201ENST00000412714 MYH4Q9Y623 1939 aa15.03■□□□□ -0
LINC00388-201ENST00000412714 SMCHD1A6NHR9 2005 aa15.02■□□□□ -0
LINC00388-201ENST00000412714 TTC41PQ6P2S7 1318 aa15.02■□□□□ -0
LINC00388-201ENST00000412714 M0R2C6 588 aa15.02■□□□□ -0
LINC00388-201ENST00000412714 NDUFB10O96000 172 aa15.02■□□□□ -0
LINC00388-201ENST00000412714 MX1P20591 662 aa15.02■□□□□ -0
LINC00388-201ENST00000412714 ADCYAP1R1P41586 468 aa15.02■□□□□ -0
LINC00388-201ENST00000412714 ZNF792Q3KQV3 632 aa15.02■□□□□ -0
LINC00388-201ENST00000412714 SNRNP48Q6IEG0 339 aaKnown RBP15.02■□□□□ -0
LINC00388-201ENST00000412714 Q7L0L9 218 aa15.02■□□□□ -0
LINC00388-201ENST00000412714 RNF180Q86T96 592 aa15.02■□□□□ -0
LINC00388-201ENST00000412714 PRPF38AQ8NAV1 312 aaKnown RBP15.02■□□□□ -0
LINC00388-201ENST00000412714 XPNPEP3Q9NQH7 507 aa15.02■□□□□ -0
LINC00388-201ENST00000412714 CNPY2Q9Y2B0 182 aa15.02■□□□□ -0
LINC00388-201ENST00000412714 COL6A3P12111 3177 aa15.01□□□□□ -0.01
LINC00388-201ENST00000412714 PATL2C9JE40 543 aaKnown RBP15.01□□□□□ -0.01
LINC00388-201ENST00000412714 ZBED4O75132 1171 aa15.01□□□□□ -0.01
LINC00388-201ENST00000412714 PRDM1O75626 825 aa15.01□□□□□ -0.01
LINC00388-201ENST00000412714 AKR1A1P14550 325 aa15.01□□□□□ -0.01
LINC00388-201ENST00000412714 SNX17Q15036 470 aa15.01□□□□□ -0.01
LINC00388-201ENST00000412714 TRIM60Q495X7 471 aa15.01□□□□□ -0.01
LINC00388-201ENST00000412714 IFNL3Q8IZI9 196 aa15.01□□□□□ -0.01
LINC00388-201ENST00000412714 FERMT2Q96AC1 680 aa15.01□□□□□ -0.01
LINC00388-201ENST00000412714 DDX11Q96FC9 970 aa15.01□□□□□ -0.01
LINC00388-201ENST00000412714 FSD1Q9BTV5 496 aa15.01□□□□□ -0.01
LINC00388-201ENST00000412714 LTBP2Q14767 1821 aa15.01□□□□□ -0.01
LINC00388-201ENST00000412714 IGKV6D-41A0A0C4DH26 115 aa15□□□□□ -0.01
LINC00388-201ENST00000412714 TTLL1O95922 423 aa15□□□□□ -0.01
LINC00388-201ENST00000412714 SLC3A2P08195 630 aaKnown RBP15□□□□□ -0.01
LINC00388-201ENST00000412714 SLC4A3P48751 1232 aa15□□□□□ -0.01
LINC00388-201ENST00000412714 PDE4BQ07343 736 aa15□□□□□ -0.01
LINC00388-201ENST00000412714 CPXCR1Q8N123 301 aa15□□□□□ -0.01
LINC00388-201ENST00000412714 MSL3Q8N5Y2 521 aaKnown RBP15□□□□□ -0.01
LINC00388-201ENST00000412714 KIFC2Q96AC6 838 aa15□□□□□ -0.01
LINC00388-201ENST00000412714 CEP95Q96GE4 821 aa15□□□□□ -0.01
LINC00388-201ENST00000412714 NAPBQ9H115 298 aa15□□□□□ -0.01
LINC00388-201ENST00000412714 FEM1BQ9UK73 627 aa15□□□□□ -0.01
LINC00388-201ENST00000412714 SYNPO2Q9UMS6 1093 aa15□□□□□ -0.01
LINC00388-201ENST00000412714 PGK1P00558 417 aa14.99□□□□□ -0.01
LINC00388-201ENST00000412714 TSPY3P0CV98 308 aa14.99□□□□□ -0.01
LINC00388-201ENST00000412714 TSPY8P0CW00 308 aa14.99□□□□□ -0.01
LINC00388-201ENST00000412714 TAL1P17542 331 aaPredicted RBP14.99□□□□□ -0.01
LINC00388-201ENST00000412714 SDSP20132 328 aa14.99□□□□□ -0.01
LINC00388-201ENST00000412714 C1orf53Q5VUE5 145 aa14.99□□□□□ -0.01
LINC00388-201ENST00000412714 LRRC47Q8N1G4 583 aaKnown RBP14.99□□□□□ -0.01
LINC00388-201ENST00000412714 MKL1Q969V6 931 aa14.99□□□□□ -0.01
LINC00388-201ENST00000412714 PDLIM7Q9NR12 457 aa14.99□□□□□ -0.01
LINC00388-201ENST00000412714 MTMR10Q9NXD2 777 aa14.99□□□□□ -0.01
LINC00388-201ENST00000412714 MTMR4Q9NYA4 1195 aa14.99□□□□□ -0.01
LINC00388-201ENST00000412714 ISY1Q9ULR0 285 aaKnown RBP14.99□□□□□ -0.01
LINC00388-201ENST00000412714 PHF24Q9UPV7 400 aa14.99□□□□□ -0.01
LINC00388-201ENST00000412714 STXBP5LQ9Y2K9 1186 aa14.99□□□□□ -0.01
LINC00388-201ENST00000412714 SYNGAP1Q96PV0 1343 aa14.98□□□□□ -0.01
LINC00388-201ENST00000412714 ATP2A1O14983 1001 aa14.98□□□□□ -0.01
LINC00388-201ENST00000412714 ZNF865P0CJ78 1059 aaPredicted RBP14.98□□□□□ -0.01
LINC00388-201ENST00000412714 MFAP1P55081 439 aaKnown RBP14.98□□□□□ -0.01
LINC00388-201ENST00000412714 GMCL1P1Q8NEA9 526 aa14.98□□□□□ -0.01
LINC00388-201ENST00000412714 PI4K2BQ8TCG2 481 aa14.98□□□□□ -0.01
LINC00388-201ENST00000412714 SEC62Q99442 399 aaKnown RBP14.98□□□□□ -0.01
LINC00388-201ENST00000412714 SLC38A10Q9HBR0 1119 aa14.98□□□□□ -0.01
LINC00388-201ENST00000412714 RAVER2Q9HCJ3 691 aaKnown RBP14.98□□□□□ -0.01
LINC00388-201ENST00000412714 FBXO40Q9UH90 709 aa14.98□□□□□ -0.01
LINC00388-201ENST00000412714 ZHX1Q9UKY1 873 aaPredicted RBP14.98□□□□□ -0.01
LINC00388-201ENST00000412714 RIPK3Q9Y572 518 aa14.98□□□□□ -0.01
LINC00388-201ENST00000412714 PLIN4Q96Q06 1357 aa14.98□□□□□ -0.01
LINC00388-201ENST00000412714 BMP3P12645 472 aa14.97□□□□□ -0.01
LINC00388-201ENST00000412714 RBM25P49756 843 aaKnown RBP14.97□□□□□ -0.01
LINC00388-201ENST00000412714 OAZ1P54368 228 aa14.97□□□□□ -0.01
LINC00388-201ENST00000412714 TLE2Q04725 743 aa14.97□□□□□ -0.01
LINC00388-201ENST00000412714 PPARAQ07869 468 aa14.97□□□□□ -0.01
LINC00388-201ENST00000412714 PPP4R3BQ5MIZ7 849 aa14.97□□□□□ -0.01
LINC00388-201ENST00000412714 ZMYM1Q5SVZ6 1142 aa14.97□□□□□ -0.01
LINC00388-201ENST00000412714 SLFN13Q68D06 897 aa14.97□□□□□ -0.01
LINC00388-201ENST00000412714 CASC1Q6TDU7 716 aa14.97□□□□□ -0.01
LINC00388-201ENST00000412714 ANKRD35Q8N283 1001 aa14.97□□□□□ -0.01
LINC00388-201ENST00000412714 NEDD1Q8NHV4 660 aa14.97□□□□□ -0.01
LINC00388-201ENST00000412714 BADQ92934 168 aa14.97□□□□□ -0.01
LINC00388-201ENST00000412714 C22orf23Q9BZE7 217 aa14.97□□□□□ -0.01
LINC00388-201ENST00000412714 FAM184BQ9ULE4 1060 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms