RNA–Protein interactions for RNA: ENST00000412011.5

ITSN2-205, Transcript of intersectin 2, humanhuman

TSL 1 (best)

Gene ITSN2, Length 2,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-205ENST00000412011 ATRNL1Q5VV63 1379 aa23.51■■□□□ 1.35
ITSN2-205ENST00000412011 ACTN4O43707 911 aaKnown RBP23.51■■□□□ 1.35
ITSN2-205ENST00000412011 ZNF75DP51815 510 aa23.51■■□□□ 1.35
ITSN2-205ENST00000412011 ATP2B2Q01814 1243 aa23.51■■□□□ 1.35
ITSN2-205ENST00000412011 PPP4R3BQ5MIZ7 849 aa23.51■■□□□ 1.35
ITSN2-205ENST00000412011 TATDN1Q6P1N9 297 aa23.51■■□□□ 1.35
ITSN2-205ENST00000412011 PDILTQ8N807 584 aa23.51■■□□□ 1.35
ITSN2-205ENST00000412011 ZBTB7AO95365 584 aa23.5■■□□□ 1.35
ITSN2-205ENST00000412011 SHROOM1Q2M3G4 852 aaPredicted RBP23.5■■□□□ 1.35
ITSN2-205ENST00000412011 ISM2Q6H9L7 571 aa23.5■■□□□ 1.35
ITSN2-205ENST00000412011 C4orf32Q8N8J7 132 aa23.5■■□□□ 1.35
ITSN2-205ENST00000412011 SYMPKQ92797 1274 aaKnown RBP23.5■■□□□ 1.35
ITSN2-205ENST00000412011 TRIM34Q9BYJ4 488 aa23.5■■□□□ 1.35
ITSN2-205ENST00000412011 TRIM5Q9C035 493 aa23.5■■□□□ 1.35
ITSN2-205ENST00000412011 HOOK1Q9UJC3 728 aaKnown RBP23.5■■□□□ 1.35
ITSN2-205ENST00000412011 PCDHA5Q9Y5H7 936 aa23.5■■□□□ 1.35
ITSN2-205ENST00000412011 COL2A1P02458 1487 aaPredicted RBP23.5■■□□□ 1.35
ITSN2-205ENST00000412011 A0A087X0B3 334 aa23.5■■□□□ 1.35
ITSN2-205ENST00000412011 VWA3AA6NCI4 1184 aa23.5■■□□□ 1.35
ITSN2-205ENST00000412011 SMCO2A6NFE2 343 aa23.5■■□□□ 1.35
ITSN2-205ENST00000412011 SARM1Q6SZW1 724 aa23.5■■□□□ 1.35
ITSN2-205ENST00000412011 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.5■■□□□ 1.35
ITSN2-205ENST00000412011 POSTNQ15063 836 aa23.49■■□□□ 1.35
ITSN2-205ENST00000412011 IL17AQ16552 155 aa23.49■■□□□ 1.35
ITSN2-205ENST00000412011 VPS33BQ9H267 617 aa23.49■■□□□ 1.35
ITSN2-205ENST00000412011 C6orf50Q9HD87 102 aa23.49■■□□□ 1.35
ITSN2-205ENST00000412011 INF2Q27J81 1249 aa23.48■■□□□ 1.35
ITSN2-205ENST00000412011 SPC24Q8NBT2 197 aa23.48■■□□□ 1.35
ITSN2-205ENST00000412011 BRCA1P38398 1863 aaKnown RBP23.48■■□□□ 1.35
ITSN2-205ENST00000412011 ARFGEF1Q9Y6D6 1849 aa23.48■■□□□ 1.35
ITSN2-205ENST00000412011 SPDYE2BA6NHP3 402 aa23.48■■□□□ 1.35
ITSN2-205ENST00000412011 hCG_1984214I3L0E3 225 aa23.48■■□□□ 1.35
ITSN2-205ENST00000412011 PRR29P0C7W0 189 aa23.48■■□□□ 1.35
ITSN2-205ENST00000412011 SPDYE6P0CI01 402 aa23.48■■□□□ 1.35
ITSN2-205ENST00000412011 GNA11P29992 359 aa23.48■■□□□ 1.35
ITSN2-205ENST00000412011 SOGA3Q5TF21 947 aa23.48■■□□□ 1.35
ITSN2-205ENST00000412011 TTBK2Q6IQ55 1244 aa23.48■■□□□ 1.35
ITSN2-205ENST00000412011 ZNF713Q8N859 430 aaPredicted RBP23.48■■□□□ 1.35
ITSN2-205ENST00000412011 NYAP2Q9P242 653 aa23.48■■□□□ 1.35
ITSN2-205ENST00000412011 ESYT2A0FGR8 921 aa23.47■■□□□ 1.35
ITSN2-205ENST00000412011 EEF2P13639 858 aaKnown RBP23.47■■□□□ 1.35
ITSN2-205ENST00000412011 TGFB2P61812 414 aa23.47■■□□□ 1.35
ITSN2-205ENST00000412011 GPATCH4Q5T3I0 446 aaKnown RBP23.47■■□□□ 1.35
ITSN2-205ENST00000412011 ARL6IP4Q66PJ3 421 aaKnown RBP23.47■■□□□ 1.35
ITSN2-205ENST00000412011 KANK3Q6NY19 840 aa23.47■■□□□ 1.35
ITSN2-205ENST00000412011 MKL1Q969V6 931 aa23.47■■□□□ 1.35
ITSN2-205ENST00000412011 DHX58Q96C10 678 aa23.47■■□□□ 1.35
ITSN2-205ENST00000412011 KANSL2Q9H9L4 492 aa23.47■■□□□ 1.35
ITSN2-205ENST00000412011 PIM2Q9P1W9 311 aa23.47■■□□□ 1.35
ITSN2-205ENST00000412011 CCDC96Q2M329 555 aa23.47■■□□□ 1.35
ITSN2-205ENST00000412011 KRT25Q7Z3Z0 450 aa23.47■■□□□ 1.35
ITSN2-205ENST00000412011 GRAMD1CQ8IYS0 662 aa23.47■■□□□ 1.35
ITSN2-205ENST00000412011 ADGRF4Q8IZF3 695 aa23.47■■□□□ 1.35
ITSN2-205ENST00000412011 JMJD4Q9H9V9 463 aa23.47■■□□□ 1.35
ITSN2-205ENST00000412011 HDAC9Q9UKV0 1011 aa23.47■■□□□ 1.35
ITSN2-205ENST00000412011 ATF5Q9Y2D1 282 aaPredicted RBP23.47■■□□□ 1.35
ITSN2-205ENST00000412011 ZBTB12Q9Y330 459 aaPredicted RBP23.47■■□□□ 1.35
ITSN2-205ENST00000412011 FER1L6Q2WGJ9 1857 aa23.46■■□□□ 1.35
ITSN2-205ENST00000412011 SEPT2Q15019 361 aa23.46■■□□□ 1.35
ITSN2-205ENST00000412011 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.46■■□□□ 1.35
ITSN2-205ENST00000412011 NIM1KQ8IY84 436 aa23.46■■□□□ 1.35
ITSN2-205ENST00000412011 ZNF830Q96NB3 372 aaPredicted RBP23.46■■□□□ 1.35
ITSN2-205ENST00000412011 ZNRF3Q9ULT6 936 aa23.46■■□□□ 1.35
ITSN2-205ENST00000412011 DLGAP5Q15398 846 aa23.45■■□□□ 1.35
ITSN2-205ENST00000412011 TMEM179Q6ZVK1 233 aa23.45■■□□□ 1.35
ITSN2-205ENST00000412011 SIAH1Q8IUQ4 282 aa23.45■■□□□ 1.35
ITSN2-205ENST00000412011 COA7Q96BR5 231 aa23.45■■□□□ 1.35
ITSN2-205ENST00000412011 TMOD2Q9NZR1 351 aa23.45■■□□□ 1.35
ITSN2-205ENST00000412011 GOLGB1Q14789 3259 aaKnown RBP23.45■■□□□ 1.34
ITSN2-205ENST00000412011 GDF11O95390 407 aa23.45■■□□□ 1.34
ITSN2-205ENST00000412011 SARSP49591 514 aaKnown RBP23.45■■□□□ 1.34
ITSN2-205ENST00000412011 NT5DC1Q5TFE4 455 aa23.45■■□□□ 1.34
ITSN2-205ENST00000412011 KCTD1Q719H9 257 aa23.45■■□□□ 1.34
ITSN2-205ENST00000412011 CCDC125Q86Z20 511 aa23.45■■□□□ 1.34
ITSN2-205ENST00000412011 MAN1B1Q9UKM7 699 aa23.45■■□□□ 1.34
ITSN2-205ENST00000412011 CLRN2A0PK11 232 aa23.44■■□□□ 1.34
ITSN2-205ENST00000412011 GOLGA6L6A8MZA4 724 aa23.44■■□□□ 1.34
ITSN2-205ENST00000412011 TCP10L2B9ZVM9 353 aa23.44■■□□□ 1.34
ITSN2-205ENST00000412011 SLFN14P0C7P3 912 aa23.44■■□□□ 1.34
ITSN2-205ENST00000412011 NCAPHQ15003 741 aa23.44■■□□□ 1.34
ITSN2-205ENST00000412011 NONOQ15233 471 aaKnown RBP eCLIP23.44■■□□□ 1.34
ITSN2-205ENST00000412011 ABCB5Q2M3G0 1257 aa23.44■■□□□ 1.34
ITSN2-205ENST00000412011 CSRNP1Q96S65 589 aa23.44■■□□□ 1.34
ITSN2-205ENST00000412011 TMEM60Q9H2L4 133 aa23.44■■□□□ 1.34
ITSN2-205ENST00000412011 ZNF70Q9UC06 446 aaPredicted RBP23.44■■□□□ 1.34
ITSN2-205ENST00000412011 PNMA6FA0A0J9YX94 578 aa23.44■■□□□ 1.34
ITSN2-205ENST00000412011 ZNF500O60304 480 aaPredicted RBP23.44■■□□□ 1.34
ITSN2-205ENST00000412011 BMP6P22004 513 aa23.44■■□□□ 1.34
ITSN2-205ENST00000412011 SLC16A2P36021 539 aa23.44■■□□□ 1.34
ITSN2-205ENST00000412011 SH3RF1Q7Z6J0 888 aa23.44■■□□□ 1.34
ITSN2-205ENST00000412011 OGFOD1Q8N543 542 aa23.44■■□□□ 1.34
ITSN2-205ENST00000412011 SMARCE1Q969G3 411 aa23.44■■□□□ 1.34
ITSN2-205ENST00000412011 TTC12Q9H892 705 aaPredicted RBP23.44■■□□□ 1.34
ITSN2-205ENST00000412011 SMTNL1A8MU46 457 aa23.43■■□□□ 1.34
ITSN2-205ENST00000412011 CDC25BP30305 580 aa23.43■■□□□ 1.34
ITSN2-205ENST00000412011 ICA1Q05084 483 aa23.43■■□□□ 1.34
ITSN2-205ENST00000412011 DCAF4Q8WV16 495 aa23.43■■□□□ 1.34
ITSN2-205ENST00000412011 MTMR8Q96EF0 704 aa23.43■■□□□ 1.34
ITSN2-205ENST00000412011 IKBKBO14920 756 aa23.42■■□□□ 1.34
ITSN2-205ENST00000412011 PPP1R11O60927 126 aaPredicted RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms