RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 ROBO3Q96MS0 1386 aa8.44□□□□□ -1.06
LSM8-202ENST00000411938 REV3LO60673 3130 aa8.44□□□□□ -1.06
LSM8-202ENST00000411938 RIF1Q5UIP0 2472 aaKnown RBP8.43□□□□□ -1.06
LSM8-202ENST00000411938 DUSP11O75319 330 aaKnown RBP8.43□□□□□ -1.06
LSM8-202ENST00000411938 DSG3P32926 999 aa8.43□□□□□ -1.06
LSM8-202ENST00000411938 USP5P45974 858 aa8.43□□□□□ -1.06
LSM8-202ENST00000411938 SEPT2Q15019 361 aa8.43□□□□□ -1.06
LSM8-202ENST00000411938 ADGRA1Q86SQ6 560 aa8.43□□□□□ -1.06
LSM8-202ENST00000411938 FAM178BQ8IXR5 827 aa8.43□□□□□ -1.06
LSM8-202ENST00000411938 COPRSQ9NQ92 184 aa8.43□□□□□ -1.06
LSM8-202ENST00000411938 SNRKQ9NRH2 765 aa8.43□□□□□ -1.06
LSM8-202ENST00000411938 PTPRCP08575 1304 aa8.43□□□□□ -1.06
LSM8-202ENST00000411938 UMODL1Q5DID0 1318 aa8.43□□□□□ -1.06
LSM8-202ENST00000411938 ZNF318Q5VUA4 2279 aa8.43□□□□□ -1.06
LSM8-202ENST00000411938 ZNFX1Q9P2E3 1918 aaKnown RBP8.42□□□□□ -1.06
LSM8-202ENST00000411938 A0A1W2PRG0 241 aa8.42□□□□□ -1.06
LSM8-202ENST00000411938 MPHOSPH10O00566 681 aaKnown RBP8.42□□□□□ -1.06
LSM8-202ENST00000411938 ST18O60284 1047 aa8.42□□□□□ -1.06
LSM8-202ENST00000411938 CD4P01730 458 aa8.42□□□□□ -1.06
LSM8-202ENST00000411938 UQCRFS1P1P0C7P4 283 aa8.42□□□□□ -1.06
LSM8-202ENST00000411938 CST5P28325 142 aaPredicted RBP8.42□□□□□ -1.06
LSM8-202ENST00000411938 MCAMP43121 646 aa8.42□□□□□ -1.06
LSM8-202ENST00000411938 DYNLL1P63167 89 aaKnown RBP8.42□□□□□ -1.06
LSM8-202ENST00000411938 GRB10Q13322 594 aa8.42□□□□□ -1.06
LSM8-202ENST00000411938 TMEM132BQ14DG7 1078 aa8.42□□□□□ -1.06
LSM8-202ENST00000411938 TTC6Q86TZ1 520 aa8.42□□□□□ -1.06
LSM8-202ENST00000411938 SPICE1Q8N0Z3 855 aa8.42□□□□□ -1.06
LSM8-202ENST00000411938 MRPL50Q8N5N7 158 aaKnown RBP8.42□□□□□ -1.06
LSM8-202ENST00000411938 CDK5RAP2Q96SN8 1893 aa8.42□□□□□ -1.06
LSM8-202ENST00000411938 DCXO43602 365 aa8.41□□□□□ -1.06
LSM8-202ENST00000411938 SNAI1O95863 264 aaPredicted RBP8.41□□□□□ -1.06
LSM8-202ENST00000411938 CYP7A1P22680 504 aa8.41□□□□□ -1.06
LSM8-202ENST00000411938 ARID4AP29374 1257 aaPredicted RBP8.41□□□□□ -1.06
LSM8-202ENST00000411938 GUCY1A2P33402 732 aa8.41□□□□□ -1.06
LSM8-202ENST00000411938 ANP32AP39687 249 aaKnown RBP8.41□□□□□ -1.06
LSM8-202ENST00000411938 FOXK2Q01167 660 aa8.41□□□□□ -1.06
LSM8-202ENST00000411938 TAP1Q03518 808 aa8.41□□□□□ -1.06
LSM8-202ENST00000411938 TTLL4Q14679 1199 aa8.41□□□□□ -1.06
LSM8-202ENST00000411938 KIAA1755Q5JYT7 1200 aa8.41□□□□□ -1.06
LSM8-202ENST00000411938 CXCL17Q6UXB2 119 aa8.41□□□□□ -1.06
LSM8-202ENST00000411938 DDX11Q96FC9 970 aa8.41□□□□□ -1.06
LSM8-202ENST00000411938 SCLYQ96I15 445 aa8.41□□□□□ -1.06
LSM8-202ENST00000411938 PHOX2BQ99453 314 aa8.41□□□□□ -1.06
LSM8-202ENST00000411938 NOC4LQ9BVI4 516 aaKnown RBP8.41□□□□□ -1.06
LSM8-202ENST00000411938 TRPV6Q9H1D0 765 aa8.41□□□□□ -1.06
LSM8-202ENST00000411938 WNT8AQ9H1J5 351 aa8.41□□□□□ -1.06
LSM8-202ENST00000411938 EHD4Q9H223 541 aa8.41□□□□□ -1.06
LSM8-202ENST00000411938 HDAC5Q9UQL6 1122 aa8.41□□□□□ -1.06
LSM8-202ENST00000411938 NOP58Q9Y2X3 529 aaKnown RBP8.41□□□□□ -1.06
LSM8-202ENST00000411938 CACNA1BQ00975 2339 aa8.4□□□□□ -1.06
LSM8-202ENST00000411938 KIF28PB7ZC32 967 aa8.4□□□□□ -1.06
LSM8-202ENST00000411938 ARHGEF15O94989 841 aa8.4□□□□□ -1.06
LSM8-202ENST00000411938 KCNA5P22460 613 aa8.4□□□□□ -1.06
LSM8-202ENST00000411938 SHMT1P34896 483 aa8.4□□□□□ -1.06
LSM8-202ENST00000411938 STAT3P40763 770 aa8.4□□□□□ -1.06
LSM8-202ENST00000411938 GJA9P57773 515 aa8.4□□□□□ -1.06
LSM8-202ENST00000411938 BEX3Q00994 111 aa8.4□□□□□ -1.06
LSM8-202ENST00000411938 CCDC144BQ3MJ40 725 aa8.4□□□□□ -1.06
LSM8-202ENST00000411938 NOL8Q76FK4 1167 aaKnown RBP8.4□□□□□ -1.06
LSM8-202ENST00000411938 DEFB128Q7Z7B8 93 aa8.4□□□□□ -1.06
LSM8-202ENST00000411938 RIOX2Q8IUF8 465 aa8.4□□□□□ -1.06
LSM8-202ENST00000411938 MSL3Q8N5Y2 521 aaKnown RBP8.4□□□□□ -1.06
LSM8-202ENST00000411938 MIGA1Q8NAN2 632 aa8.4□□□□□ -1.06
LSM8-202ENST00000411938 EXOC6Q8TAG9 804 aa8.4□□□□□ -1.06
LSM8-202ENST00000411938 UPF3AQ9H1J1 476 aaKnown RBP8.4□□□□□ -1.06
LSM8-202ENST00000411938 UBE2ZQ9H832 354 aaPredicted RBP8.4□□□□□ -1.06
LSM8-202ENST00000411938 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.4□□□□□ -1.06
LSM8-202ENST00000411938 ZNF536O15090 1300 aa8.39□□□□□ -1.07
LSM8-202ENST00000411938 ADCY6O43306 1168 aa8.39□□□□□ -1.07
LSM8-202ENST00000411938 LPXNO60711 386 aa8.39□□□□□ -1.07
LSM8-202ENST00000411938 POLR3DP05423 398 aaPredicted RBP8.39□□□□□ -1.07
LSM8-202ENST00000411938 PFKMP08237 780 aa8.39□□□□□ -1.07
LSM8-202ENST00000411938 ACTN1P12814 892 aa8.39□□□□□ -1.07
LSM8-202ENST00000411938 IL9P15248 144 aa8.39□□□□□ -1.07
LSM8-202ENST00000411938 COPB2P35606 906 aa8.39□□□□□ -1.07
LSM8-202ENST00000411938 ITGA7Q13683 1181 aa8.39□□□□□ -1.07
LSM8-202ENST00000411938 ACVR2BQ13705 512 aa8.39□□□□□ -1.07
LSM8-202ENST00000411938 LEXMQ3ZCV2 418 aa8.39□□□□□ -1.07
LSM8-202ENST00000411938 TTC39AQ5SRH9 613 aa8.39□□□□□ -1.07
LSM8-202ENST00000411938 PTCRAQ6ISU1 281 aaPredicted RBP8.39□□□□□ -1.07
LSM8-202ENST00000411938 HFE2Q6ZVN8 426 aa8.39□□□□□ -1.07
LSM8-202ENST00000411938 ANKS1AQ92625 1134 aa8.39□□□□□ -1.07
LSM8-202ENST00000411938 MFSD14AQ96MC6 490 aa8.39□□□□□ -1.07
LSM8-202ENST00000411938 SLC9A7Q96T83 725 aa8.39□□□□□ -1.07
LSM8-202ENST00000411938 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.39□□□□□ -1.07
LSM8-202ENST00000411938 A0A0G2JMZ2 1700 aa8.38□□□□□ -1.07
LSM8-202ENST00000411938 FAM186AA6NE01 2351 aa8.38□□□□□ -1.07
LSM8-202ENST00000411938 POTEB3A0JP26 581 aa8.38□□□□□ -1.07
LSM8-202ENST00000411938 CTAGE5O15320 804 aa8.38□□□□□ -1.07
LSM8-202ENST00000411938 SRGAP3O43295 1099 aa8.38□□□□□ -1.07
LSM8-202ENST00000411938 B4GALT4O60513 344 aa8.38□□□□□ -1.07
LSM8-202ENST00000411938 CABYRO75952 493 aa8.38□□□□□ -1.07
LSM8-202ENST00000411938 CYP2E1P05181 493 aaPredicted RBP8.38□□□□□ -1.07
LSM8-202ENST00000411938 SLC4A3P48751 1232 aa8.38□□□□□ -1.07
LSM8-202ENST00000411938 PLCD1P51178 756 aa8.38□□□□□ -1.07
LSM8-202ENST00000411938 POTEBQ6S5H4 581 aa8.38□□□□□ -1.07
LSM8-202ENST00000411938 MAMDC4Q6UXC1 1216 aa8.38□□□□□ -1.07
LSM8-202ENST00000411938 SPRED2Q7Z698 418 aa8.38□□□□□ -1.07
LSM8-202ENST00000411938 CLEC10AQ8IUN9 316 aa8.38□□□□□ -1.07
LSM8-202ENST00000411938 HERC6Q8IVU3 1022 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms