RNA–Protein interactions for RNA: ENST00000409911.5

LRRTM4-205, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LRRTM4, Length 2,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-205ENST00000409911 SPATS2Q86XZ4 545 aaKnown RBP7.55□□□□□ -1.2
LRRTM4-205ENST00000409911 WDR75Q8IWA0 830 aaKnown RBP7.55□□□□□ -1.2
LRRTM4-205ENST00000409911 FAM200AQ8TCP9 573 aa7.55□□□□□ -1.2
LRRTM4-205ENST00000409911 DHTKD1Q96HY7 919 aaPredicted RBP7.55□□□□□ -1.2
LRRTM4-205ENST00000409911 TCHPQ9BT92 498 aa7.55□□□□□ -1.2
LRRTM4-205ENST00000409911 OXCT2Q9BYC2 517 aaPredicted RBP7.55□□□□□ -1.2
LRRTM4-205ENST00000409911 PCDH18Q9HCL0 1135 aa7.55□□□□□ -1.2
LRRTM4-205ENST00000409911 STAP2Q9UGK3 403 aa7.55□□□□□ -1.2
LRRTM4-205ENST00000409911 GMEB1Q9Y692 573 aa7.55□□□□□ -1.2
LRRTM4-205ENST00000409911 TNS2Q63HR2 1409 aa7.55□□□□□ -1.2
LRRTM4-205ENST00000409911 MTRF1O75570 445 aaKnown RBP7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 TUBB4AP04350 444 aa7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 LINGO3P0C6S8 592 aa7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 ARHGAP25P42331 645 aa7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 EVCP57679 992 aa7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 PPP4CP60510 307 aa7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 PIP4K2BP78356 416 aa7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 POU5F1Q01860 360 aaKnown RBP7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 SNW1Q13573 536 aaKnown RBP7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 AGAP9Q5VTM2 703 aa7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 SLC15A3Q8IY34 581 aa7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 TMCO5AQ8N6Q1 288 aa7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 ENOX1Q8TC92 643 aaKnown RBP7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 SIL1Q9H173 461 aa7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 TLR7Q9NYK1 1049 aaKnown RBP7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 ITGB1BP2Q9UKP3 347 aa7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 TMED5Q9Y3A6 229 aa7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 COL22A1Q8NFW1 1626 aaPredicted RBP7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 COL14A1Q05707 1796 aaKnown RBP7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 NUP188Q5SRE5 1749 aa7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 ATP9BO43861 1147 aa7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 EVI5O60447 810 aa7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 LDHAP00338 332 aaKnown RBP7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 CASP7P55210 303 aa7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 PHEXP78562 749 aa7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 SLMAPQ14BN4 828 aa7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 PLCB4Q15147 1175 aa7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 CCDC38Q502W7 563 aa7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 KANK3Q6NY19 840 aa7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 GIGYF2Q6Y7W6 1299 aaKnown RBP7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 HDXQ7Z353 690 aa7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 LRRC49Q8IUZ0 686 aa7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 CCAR2Q8N163 923 aaKnown RBP7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 RILPL2Q969X0 211 aa7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 VMP1Q96GC9 406 aa7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 ACSBG1Q96GR2 724 aa7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 UBE2OQ9C0C9 1292 aaKnown RBP7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 ZBTB3Q9H5J0 574 aa7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 FAM204AQ9H8W3 233 aa7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 HOOK1Q9UJC3 728 aaKnown RBP7.54□□□□□ -1.2
LRRTM4-205ENST00000409911 NUTM2BA6NNL0 878 aaPredicted RBP7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 NUTM2EB1AL46 878 aaPredicted RBP7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 SLC26A4O43511 780 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 PDHBP11177 359 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 CSE1LP55060 971 aaKnown RBP7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 OXCT1P55809 520 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 SH3BGRP55822 239 aaPredicted RBP7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 CCDC152Q4G0S7 254 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 CCDC121Q6ZUS5 278 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 UBE3BQ7Z3V4 1068 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 C11orf96Q7Z7L8 435 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 NUTM2AQ8IVF1 878 aaPredicted RBP7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 DNAJC10Q8IXB1 793 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 AFAP1L1Q8TED9 768 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 TNMDQ9H2S6 317 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 KCND1Q9NSA2 647 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 COMMD8Q9NX08 183 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 WWC3Q9ULE0 1092 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 SSX2IPQ9Y2D8 614 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 PHLPP1O60346 1717 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 TJP1Q07157 1748 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 PLCH1Q4KWH8 1693 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 DDX58O95786 925 aaKnown RBP7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 PPP1R15BQ5SWA1 713 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 NUGGCQ68CJ6 796 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 VTI1AQ96AJ9 217 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 HVCN1Q96D96 273 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 ZMAT2Q96NC0 199 aaKnown RBP7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 SYNCQ9H7C4 482 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 PREBQ9HCU5 417 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 KLHL42Q9P2K6 505 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 CCDC151A5D8V7 595 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 GOLGA8AA7E2F4 631 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 KDM1AO60341 852 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 FUT4P22083 530 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 RFX5P48382 616 aaPredicted RBP7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 NEK4P51957 841 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 ARHGEF6Q15052 776 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 BRD3Q15059 726 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 COBLL1Q53SF7 1204 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 CCSAPQ6IQ19 270 aaPredicted RBP7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 EAF2Q96CJ1 260 aaPredicted RBP7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 SLC40A1Q9NP59 571 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 ATXN10Q9UBB4 475 aa7.53□□□□□ -1.2
LRRTM4-205ENST00000409911 TMEM232C9JQI7 657 aa7.52□□□□□ -1.21
LRRTM4-205ENST00000409911 N4BP1O75113 896 aaKnown RBP7.52□□□□□ -1.21
LRRTM4-205ENST00000409911 GADD45BO75293 160 aaPredicted RBP7.52□□□□□ -1.21
LRRTM4-205ENST00000409911 CCDC159P0C7I6 412 aa7.52□□□□□ -1.21
LRRTM4-205ENST00000409911 ATP4AP20648 1035 aa7.52□□□□□ -1.21
LRRTM4-205ENST00000409911 HOXD12P35452 270 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms