RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 NAV1Q8NEY1 1877 aa8.62□□□□□ -1.03
CXCR4-202ENST00000409817 CYP2D7A0A087X1C5 515 aa8.62□□□□□ -1.03
CXCR4-202ENST00000409817 FAM237AA0A1B0GTK4 181 aa8.62□□□□□ -1.03
CXCR4-202ENST00000409817 SOX11P35716 441 aa8.62□□□□□ -1.03
CXCR4-202ENST00000409817 GNAQP50148 359 aa8.62□□□□□ -1.03
CXCR4-202ENST00000409817 CAMK4Q16566 473 aa8.62□□□□□ -1.03
CXCR4-202ENST00000409817 FMR1NBQ8N0W7 255 aaPredicted RBP8.62□□□□□ -1.03
CXCR4-202ENST00000409817 SH3RF3Q8TEJ3 882 aaPredicted RBP8.62□□□□□ -1.03
CXCR4-202ENST00000409817 TIGD1Q96MW7 591 aa8.62□□□□□ -1.03
CXCR4-202ENST00000409817 AIFM3Q96NN9 605 aa8.62□□□□□ -1.03
CXCR4-202ENST00000409817 EYA3Q99504 573 aa8.62□□□□□ -1.03
CXCR4-202ENST00000409817 FTOQ9C0B1 505 aaKnown RBP eCLIP8.62□□□□□ -1.03
CXCR4-202ENST00000409817 BRMS1Q9HCU9 246 aa8.62□□□□□ -1.03
CXCR4-202ENST00000409817 WBP1LQ9NX94 342 aa8.62□□□□□ -1.03
CXCR4-202ENST00000409817 CEP131Q9UPN4 1083 aa8.62□□□□□ -1.03
CXCR4-202ENST00000409817 MRVI1Q9Y6F6 885 aa8.62□□□□□ -1.03
CXCR4-202ENST00000409817 PRDM1O75626 825 aa8.62□□□□□ -1.03
CXCR4-202ENST00000409817 BMP15O95972 392 aa8.62□□□□□ -1.03
CXCR4-202ENST00000409817 BTDP43251 543 aa8.62□□□□□ -1.03
CXCR4-202ENST00000409817 STX1AQ16623 288 aa8.62□□□□□ -1.03
CXCR4-202ENST00000409817 TMTC3Q6ZXV5 915 aa8.62□□□□□ -1.03
CXCR4-202ENST00000409817 DIS3L2Q8IYB7 885 aaKnown RBP8.62□□□□□ -1.03
CXCR4-202ENST00000409817 STK11IPQ8N1F8 1099 aa8.62□□□□□ -1.03
CXCR4-202ENST00000409817 MPNDQ8N594 471 aa8.62□□□□□ -1.03
CXCR4-202ENST00000409817 WNT2BQ93097 391 aa8.62□□□□□ -1.03
CXCR4-202ENST00000409817 ZC3H12CQ9C0D7 883 aaKnown RBP8.62□□□□□ -1.03
CXCR4-202ENST00000409817 MKNK2Q9HBH9 465 aa8.62□□□□□ -1.03
CXCR4-202ENST00000409817 MYH6P13533 1939 aa8.61□□□□□ -1.03
CXCR4-202ENST00000409817 TNS1Q9HBL0 1735 aaKnown RBP8.61□□□□□ -1.03
CXCR4-202ENST00000409817 CUTAO60888 179 aa8.61□□□□□ -1.03
CXCR4-202ENST00000409817 MMP10P09238 476 aa8.61□□□□□ -1.03
CXCR4-202ENST00000409817 JUNDP17535 347 aa8.61□□□□□ -1.03
CXCR4-202ENST00000409817 MSNP26038 577 aaKnown RBP8.61□□□□□ -1.03
CXCR4-202ENST00000409817 PTPAQ15257 358 aa8.61□□□□□ -1.03
CXCR4-202ENST00000409817 PTPRNQ16849 979 aa8.61□□□□□ -1.03
CXCR4-202ENST00000409817 AXDND1Q5T1B0 1012 aaPredicted RBP8.61□□□□□ -1.03
CXCR4-202ENST00000409817 STYK1Q6J9G0 422 aa8.61□□□□□ -1.03
CXCR4-202ENST00000409817 CKAP2LQ8IYA6 745 aa8.61□□□□□ -1.03
CXCR4-202ENST00000409817 ELOA2Q8IYF1 753 aaPredicted RBP8.61□□□□□ -1.03
CXCR4-202ENST00000409817 TEX11Q8IYF3 940 aa8.61□□□□□ -1.03
CXCR4-202ENST00000409817 ZNF444Q8N0Y2 327 aaPredicted RBP8.61□□□□□ -1.03
CXCR4-202ENST00000409817 GOLPH3LQ9H4A5 285 aa8.61□□□□□ -1.03
CXCR4-202ENST00000409817 KAT14Q9H8E8 782 aa8.61□□□□□ -1.03
CXCR4-202ENST00000409817 GJB4Q9NTQ9 266 aa8.61□□□□□ -1.03
CXCR4-202ENST00000409817 ANO10Q9NW15 660 aa8.61□□□□□ -1.03
CXCR4-202ENST00000409817 USP25Q9UHP3 1055 aa8.61□□□□□ -1.03
CXCR4-202ENST00000409817 FKBPLQ9UIM3 349 aa8.61□□□□□ -1.03
CXCR4-202ENST00000409817 NOL7Q9UMY1 257 aaKnown RBP8.61□□□□□ -1.03
CXCR4-202ENST00000409817 JAG2Q9Y219 1238 aa8.61□□□□□ -1.03
CXCR4-202ENST00000409817 MAFBQ9Y5Q3 323 aaPredicted RBP8.61□□□□□ -1.03
CXCR4-202ENST00000409817 QSER1Q2KHR3 1735 aa8.6□□□□□ -1.03
CXCR4-202ENST00000409817 DDX60LQ5H9U9 1706 aaKnown RBP8.6□□□□□ -1.03
CXCR4-202ENST00000409817 GOLGA8CPA6NN73 597 aa8.6□□□□□ -1.03
CXCR4-202ENST00000409817 TPM3P06753 285 aa8.6□□□□□ -1.03
CXCR4-202ENST00000409817 GUCY1A2P33402 732 aa8.6□□□□□ -1.03
CXCR4-202ENST00000409817 FKBP1AP62942 108 aaKnown RBP8.6□□□□□ -1.03
CXCR4-202ENST00000409817 TFAP4Q01664 338 aa8.6□□□□□ -1.03
CXCR4-202ENST00000409817 NR1H3Q13133 447 aa8.6□□□□□ -1.03
CXCR4-202ENST00000409817 ANO6Q4KMQ2 910 aa8.6□□□□□ -1.03
CXCR4-202ENST00000409817 DPP8Q6V1X1 898 aaPredicted RBP8.6□□□□□ -1.03
CXCR4-202ENST00000409817 C16orf86Q6ZW13 317 aa8.6□□□□□ -1.03
CXCR4-202ENST00000409817 KCTD17Q8N5Z5 321 aa8.6□□□□□ -1.03
CXCR4-202ENST00000409817 FAM160A2Q8N612 972 aaPredicted RBP8.6□□□□□ -1.03
CXCR4-202ENST00000409817 TGFBRAP1Q8WUH2 860 aa8.6□□□□□ -1.03
CXCR4-202ENST00000409817 LZTS2Q9BRK4 669 aa8.6□□□□□ -1.03
CXCR4-202ENST00000409817 SDF4Q9BRK5 362 aa8.6□□□□□ -1.03
CXCR4-202ENST00000409817 PHF20Q9BVI0 1012 aa8.6□□□□□ -1.03
CXCR4-202ENST00000409817 NAT10Q9H0A0 1025 aaKnown RBP8.6□□□□□ -1.03
CXCR4-202ENST00000409817 BTBD18B2RXH4 712 aa8.6□□□□□ -1.03
CXCR4-202ENST00000409817 ADCY5O95622 1261 aa8.6□□□□□ -1.03
CXCR4-202ENST00000409817 TSPY3P0CV98 308 aa8.6□□□□□ -1.03
CXCR4-202ENST00000409817 TSPY8P0CW00 308 aa8.6□□□□□ -1.03
CXCR4-202ENST00000409817 CYP2D6P10635 497 aa8.6□□□□□ -1.03
CXCR4-202ENST00000409817 LMOD1P29536 600 aaPredicted RBP8.6□□□□□ -1.03
CXCR4-202ENST00000409817 KRT2P35908 639 aa8.6□□□□□ -1.03
CXCR4-202ENST00000409817 ZNF165P49910 485 aa8.6□□□□□ -1.03
CXCR4-202ENST00000409817 RHBDL3P58872 404 aa8.6□□□□□ -1.03
CXCR4-202ENST00000409817 ZRSR1Q15695 479 aaKnown RBP8.6□□□□□ -1.03
CXCR4-202ENST00000409817 PKN1Q16512 942 aa8.6□□□□□ -1.03
CXCR4-202ENST00000409817 RCSD1Q6JBY9 416 aa8.6□□□□□ -1.03
CXCR4-202ENST00000409817 PODNQ7Z5L7 613 aa8.6□□□□□ -1.03
CXCR4-202ENST00000409817 GPR101Q96P66 508 aaPredicted RBP8.6□□□□□ -1.03
CXCR4-202ENST00000409817 MRIQ9BWK5 157 aa8.6□□□□□ -1.03
CXCR4-202ENST00000409817 SH3GLB2Q9NR46 395 aa8.6□□□□□ -1.03
CXCR4-202ENST00000409817 HPSEQ9Y251 543 aa8.6□□□□□ -1.03
CXCR4-202ENST00000409817 FOCADQ5VW36 1801 aa8.59□□□□□ -1.03
CXCR4-202ENST00000409817 FLT1P17948 1338 aa8.59□□□□□ -1.03
CXCR4-202ENST00000409817 MYO3BQ8WXR4 1341 aa8.59□□□□□ -1.03
CXCR4-202ENST00000409817 CNTNAP5Q8WYK1 1306 aa8.59□□□□□ -1.03
CXCR4-202ENST00000409817 CDK5RAP2Q96SN8 1893 aa8.59□□□□□ -1.03
CXCR4-202ENST00000409817 A0A1B0GVL5 298 aa8.59□□□□□ -1.03
CXCR4-202ENST00000409817 CARNS1A5YM72 827 aa8.59□□□□□ -1.03
CXCR4-202ENST00000409817 GOLGA6L6A8MZA4 724 aa8.59□□□□□ -1.03
CXCR4-202ENST00000409817 SMIM22K7EJ46 135 aa8.59□□□□□ -1.03
CXCR4-202ENST00000409817 ZNF202O95125 648 aa8.59□□□□□ -1.03
CXCR4-202ENST00000409817 PTMAP06454 111 aaKnown RBP8.59□□□□□ -1.03
CXCR4-202ENST00000409817 CALML3P27482 149 aa8.59□□□□□ -1.03
CXCR4-202ENST00000409817 SMARCA1P28370 1054 aa8.59□□□□□ -1.03
CXCR4-202ENST00000409817 TRAPPC10P48553 1259 aa8.59□□□□□ -1.03
CXCR4-202ENST00000409817 NDUFA8P51970 172 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms