RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 LILRB2Q8N423 598 aa8.22□□□□□ -1.09
LSM5-203ENST00000409782 KLHL23Q8NBE8 558 aa8.22□□□□□ -1.09
LSM5-203ENST00000409782 FBXO27Q8NI29 283 aa8.22□□□□□ -1.09
LSM5-203ENST00000409782 WNT8BQ93098 351 aa8.22□□□□□ -1.09
LSM5-203ENST00000409782 TESK2Q96S53 571 aa8.22□□□□□ -1.09
LSM5-203ENST00000409782 DNAJC7Q99615 494 aa8.22□□□□□ -1.09
LSM5-203ENST00000409782 EMILIN2Q9BXX0 1053 aa8.22□□□□□ -1.09
LSM5-203ENST00000409782 BTG4Q9NY30 223 aa8.22□□□□□ -1.09
LSM5-203ENST00000409782 SOX13Q9UN79 622 aa8.22□□□□□ -1.09
LSM5-203ENST00000409782 KTN1Q86UP2 1357 aaKnown RBP8.22□□□□□ -1.09
LSM5-203ENST00000409782 EDC4Q6P2E9 1401 aaKnown RBP8.21□□□□□ -1.09
LSM5-203ENST00000409782 NFAT5O94916 1531 aa8.21□□□□□ -1.1
LSM5-203ENST00000409782 DLL1O00548 723 aa8.21□□□□□ -1.1
LSM5-203ENST00000409782 MSTNO14793 375 aa8.21□□□□□ -1.1
LSM5-203ENST00000409782 MARCH6O60337 910 aa8.21□□□□□ -1.1
LSM5-203ENST00000409782 SELPP16109 830 aa8.21□□□□□ -1.1
LSM5-203ENST00000409782 CHRNA4P43681 627 aa8.21□□□□□ -1.1
LSM5-203ENST00000409782 IKBKEQ14164 716 aa8.21□□□□□ -1.1
LSM5-203ENST00000409782 NUTM2GQ5VZR2 741 aa8.21□□□□□ -1.1
LSM5-203ENST00000409782 SHISA2Q6UWI4 295 aa8.21□□□□□ -1.1
LSM5-203ENST00000409782 C16orf86Q6ZW13 317 aa8.21□□□□□ -1.1
LSM5-203ENST00000409782 LSRQ86X29 649 aaPredicted RBP8.21□□□□□ -1.1
LSM5-203ENST00000409782 GAL3ST3Q96A11 431 aa8.21□□□□□ -1.1
LSM5-203ENST00000409782 FEZ1Q99689 392 aa8.21□□□□□ -1.1
LSM5-203ENST00000409782 CWC22Q9HCG8 908 aaKnown RBP8.21□□□□□ -1.1
LSM5-203ENST00000409782 PCDHB5Q9Y5E4 795 aa8.21□□□□□ -1.1
LSM5-203ENST00000409782 SPATA31A5Q5VU36 1347 aa8.21□□□□□ -1.1
LSM5-203ENST00000409782 TTC21BQ7Z4L5 1316 aa8.21□□□□□ -1.1
LSM5-203ENST00000409782 SPATA31A7Q8IWB4 1347 aa8.21□□□□□ -1.1
LSM5-203ENST00000409782 CAMTA1Q9Y6Y1 1673 aa8.21□□□□□ -1.1
LSM5-203ENST00000409782 ST20-MTHFSA0A0A6YYL1 179 aa8.2□□□□□ -1.1
LSM5-203ENST00000409782 TLR3O15455 904 aaKnown RBP8.2□□□□□ -1.1
LSM5-203ENST00000409782 EIF4EBP3O60516 100 aaPredicted RBP8.2□□□□□ -1.1
LSM5-203ENST00000409782 BPNT1O95861 308 aa8.2□□□□□ -1.1
LSM5-203ENST00000409782 GCP02774 474 aa8.2□□□□□ -1.1
LSM5-203ENST00000409782 CD68P34810 354 aaPredicted RBP8.2□□□□□ -1.1
LSM5-203ENST00000409782 RPL6Q02878 288 aaKnown RBP8.2□□□□□ -1.1
LSM5-203ENST00000409782 PCDH1Q08174 1060 aa8.2□□□□□ -1.1
LSM5-203ENST00000409782 C2orf27AQ580R0 203 aa8.2□□□□□ -1.1
LSM5-203ENST00000409782 LLGL2Q6P1M3 1020 aa8.2□□□□□ -1.1
LSM5-203ENST00000409782 THAP3Q8WTV1 239 aaPredicted RBP8.2□□□□□ -1.1
LSM5-203ENST00000409782 SLC7A3Q8WY07 619 aa8.2□□□□□ -1.1
LSM5-203ENST00000409782 CARD10Q9BWT7 1032 aa8.2□□□□□ -1.1
LSM5-203ENST00000409782 BRMS1Q9HCU9 246 aa8.2□□□□□ -1.1
LSM5-203ENST00000409782 OSGEPQ9NPF4 335 aa8.2□□□□□ -1.1
LSM5-203ENST00000409782 A0A1W2PP64 1363 aa8.2□□□□□ -1.1
LSM5-203ENST00000409782 AATKQ6ZMQ8 1374 aa8.2□□□□□ -1.1
LSM5-203ENST00000409782 BRWD3Q6RI45 1802 aa8.19□□□□□ -1.1
LSM5-203ENST00000409782 COL5A2P05997 1499 aaPredicted RBP8.19□□□□□ -1.1
LSM5-203ENST00000409782 MEIS3P2A8K0S8 358 aa8.19□□□□□ -1.1
LSM5-203ENST00000409782 ARNTP27540 789 aa8.19□□□□□ -1.1
LSM5-203ENST00000409782 MCM4P33991 863 aa8.19□□□□□ -1.1
LSM5-203ENST00000409782 GATA4P43694 442 aa8.19□□□□□ -1.1
LSM5-203ENST00000409782 ZNF252P-AS1Q0IIN9 211 aa8.19□□□□□ -1.1
LSM5-203ENST00000409782 CHRNA2Q15822 529 aa8.19□□□□□ -1.1
LSM5-203ENST00000409782 CCDC181Q5TID7 509 aa8.19□□□□□ -1.1
LSM5-203ENST00000409782 RASIP1Q5U651 963 aa8.19□□□□□ -1.1
LSM5-203ENST00000409782 HDGFL2Q7Z4V5 671 aaPredicted RBP8.19□□□□□ -1.1
LSM5-203ENST00000409782 VN1R5Q7Z5H4 357 aa8.19□□□□□ -1.1
LSM5-203ENST00000409782 SULF2Q8IWU5 870 aa8.19□□□□□ -1.1
LSM5-203ENST00000409782 TAB3Q8N5C8 712 aaPredicted RBP8.19□□□□□ -1.1
LSM5-203ENST00000409782 KCNH5Q8NCM2 988 aa8.19□□□□□ -1.1
LSM5-203ENST00000409782 GALNT11Q8NCW6 608 aa8.19□□□□□ -1.1
LSM5-203ENST00000409782 ST13P5Q8NFI4 369 aaPredicted RBP8.19□□□□□ -1.1
LSM5-203ENST00000409782 CHMP4AQ9BY43 222 aa8.19□□□□□ -1.1
LSM5-203ENST00000409782 MRPL18Q9H0U6 180 aaKnown RBP8.19□□□□□ -1.1
LSM5-203ENST00000409782 TYW1Q9NV66 732 aaKnown RBP8.19□□□□□ -1.1
LSM5-203ENST00000409782 TERF2IPQ9NYB0 399 aa8.19□□□□□ -1.1
LSM5-203ENST00000409782 SPATA31A1Q5TZJ5 1347 aa8.19□□□□□ -1.1
LSM5-203ENST00000409782 EP400Q96L91 3159 aa8.19□□□□□ -1.1
LSM5-203ENST00000409782 ANKRD36BQ8N2N9 1353 aa8.19□□□□□ -1.1
LSM5-203ENST00000409782 OVOS2A0A0J9YW53 1432 aa8.19□□□□□ -1.1
LSM5-203ENST00000409782 OVOS2Q6IE36 1432 aa8.19□□□□□ -1.1
LSM5-203ENST00000409782 COL18A1P39060 1754 aa8.18□□□□□ -1.1
LSM5-203ENST00000409782 ESYT3A0FGR9 886 aa8.18□□□□□ -1.1
LSM5-203ENST00000409782 TRIM37O94972 964 aa8.18□□□□□ -1.1
LSM5-203ENST00000409782 ITGB2P05107 769 aa8.18□□□□□ -1.1
LSM5-203ENST00000409782 TMF1P82094 1093 aa8.18□□□□□ -1.1
LSM5-203ENST00000409782 C19orf57Q0VDD7 668 aa8.18□□□□□ -1.1
LSM5-203ENST00000409782 SUZ12Q15022 739 aaKnown RBP8.18□□□□□ -1.1
LSM5-203ENST00000409782 LRRFIP1Q32MZ4 808 aaKnown RBP8.18□□□□□ -1.1
LSM5-203ENST00000409782 DDX54Q8TDD1 881 aaKnown RBP8.18□□□□□ -1.1
LSM5-203ENST00000409782 SPOCK3Q9BQ16 436 aa8.18□□□□□ -1.1
LSM5-203ENST00000409782 CACNA2D2Q9NY47 1150 aa8.18□□□□□ -1.1
LSM5-203ENST00000409782 BLMP54132 1417 aaPredicted RBP8.18□□□□□ -1.1
LSM5-203ENST00000409782 VIL1P09327 827 aaKnown RBP8.17□□□□□ -1.1
LSM5-203ENST00000409782 CLCQ05315 142 aa8.17□□□□□ -1.1
LSM5-203ENST00000409782 SQSTM1Q13501 440 aa8.17□□□□□ -1.1
LSM5-203ENST00000409782 SEPT6Q14141 434 aa8.17□□□□□ -1.1
LSM5-203ENST00000409782 ADGRE1Q14246 886 aa8.17□□□□□ -1.1
LSM5-203ENST00000409782 MBTPS1Q14703 1052 aa8.17□□□□□ -1.1
LSM5-203ENST00000409782 KRT27Q7Z3Y8 459 aa8.17□□□□□ -1.1
LSM5-203ENST00000409782 RPUSD2Q8IZ73 545 aaKnown RBP8.17□□□□□ -1.1
LSM5-203ENST00000409782 KLHDC7BQ96G42 594 aa8.17□□□□□ -1.1
LSM5-203ENST00000409782 TM9SF2Q99805 663 aa8.17□□□□□ -1.1
LSM5-203ENST00000409782 SLC12A5Q9H2X9 1139 aa8.17□□□□□ -1.1
LSM5-203ENST00000409782 KANSL2Q9H9L4 492 aa8.17□□□□□ -1.1
LSM5-203ENST00000409782 CRB1P82279 1406 aa8.17□□□□□ -1.1
LSM5-203ENST00000409782 CCDC85CA6NKD9 419 aa8.16□□□□□ -1.1
LSM5-203ENST00000409782 SOX1O00570 391 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms