RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 SNHG28P0DPA3 235 aa22.88■■□□□ 1.25
USP39-204ENST00000409766 CHRNA5P30532 468 aa22.88■■□□□ 1.25
USP39-204ENST00000409766 NFIAQ12857 509 aa22.88■■□□□ 1.25
USP39-204ENST00000409766 DACT2Q5SW24 774 aa22.88■■□□□ 1.25
USP39-204ENST00000409766 FANCLQ9NW38 375 aa22.88■■□□□ 1.25
USP39-204ENST00000409766 GREB1LQ9C091 1923 aaPredicted RBP22.88■■□□□ 1.25
USP39-204ENST00000409766 ECE2O60344 883 aa22.87■■□□□ 1.25
USP39-204ENST00000409766 TPM2P07951 284 aa22.87■■□□□ 1.25
USP39-204ENST00000409766 LONP1P36776 959 aaKnown RBP22.87■■□□□ 1.25
USP39-204ENST00000409766 AFMP43652 599 aa22.87■■□□□ 1.25
USP39-204ENST00000409766 NAPAP54920 295 aa22.87■■□□□ 1.25
USP39-204ENST00000409766 GSDMDP57764 484 aa22.87■■□□□ 1.25
USP39-204ENST00000409766 INF2Q27J81 1249 aa22.87■■□□□ 1.25
USP39-204ENST00000409766 HOMER1Q86YM7 354 aa22.87■■□□□ 1.25
USP39-204ENST00000409766 SEC63Q9UGP8 760 aaKnown RBP22.87■■□□□ 1.25
USP39-204ENST00000409766 DPYDQ12882 1025 aa22.87■■□□□ 1.25
USP39-204ENST00000409766 KIAA0825Q8IV33 1275 aa22.87■■□□□ 1.25
USP39-204ENST00000409766 LRRC47Q8N1G4 583 aaKnown RBP22.87■■□□□ 1.25
USP39-204ENST00000409766 IQUBQ8NA54 791 aa22.87■■□□□ 1.25
USP39-204ENST00000409766 C7orf43Q8WVR3 580 aa22.87■■□□□ 1.25
USP39-204ENST00000409766 CNKSR1Q969H4 720 aa22.87■■□□□ 1.25
USP39-204ENST00000409766 PIGSQ96S52 555 aa22.87■■□□□ 1.25
USP39-204ENST00000409766 PYM1Q9BRP8 204 aaKnown RBP22.87■■□□□ 1.25
USP39-204ENST00000409766 UBA5Q9GZZ9 404 aa22.87■■□□□ 1.25
USP39-204ENST00000409766 TTLL1O95922 423 aa22.86■■□□□ 1.25
USP39-204ENST00000409766 HLA-DOAP06340 250 aa22.86■■□□□ 1.25
USP39-204ENST00000409766 HDLBPQ00341 1268 aaKnown RBP22.86■■□□□ 1.25
USP39-204ENST00000409766 FMR1Q06787 632 aaKnown RBP eCLIP22.86■■□□□ 1.253e-6■■■□□ 16.1
USP39-204ENST00000409766 ASPRV1Q53RT3 343 aa22.86■■□□□ 1.25
USP39-204ENST00000409766 ENOX1Q8TC92 643 aaKnown RBP22.86■■□□□ 1.25
USP39-204ENST00000409766 EHD4Q9H223 541 aa22.86■■□□□ 1.25
USP39-204ENST00000409766 VAT1LQ9HCJ6 419 aa22.86■■□□□ 1.25
USP39-204ENST00000409766 SMCO2A6NFE2 343 aa22.86■■□□□ 1.25
USP39-204ENST00000409766 CLEC10AQ8IUN9 316 aa22.86■■□□□ 1.25
USP39-204ENST00000409766 ZFPM1Q8IX07 1006 aa22.86■■□□□ 1.25
USP39-204ENST00000409766 GSDMAQ96QA5 445 aa22.86■■□□□ 1.25
USP39-204ENST00000409766 C6orf50Q9HD87 102 aa22.86■■□□□ 1.25
USP39-204ENST00000409766 GNA11P29992 359 aa22.85■■□□□ 1.25
USP39-204ENST00000409766 EIF6P56537 245 aaKnown RBP22.85■■□□□ 1.25
USP39-204ENST00000409766 PDXDC2PQ6P474 469 aa22.85■■□□□ 1.25
USP39-204ENST00000409766 TMC6Q7Z403 805 aa22.85■■□□□ 1.25
USP39-204ENST00000409766 ZNF219Q9P2Y4 722 aaPredicted RBP22.85■■□□□ 1.25
USP39-204ENST00000409766 PCDHAC2Q9Y5I4 1007 aa22.85■■□□□ 1.25
USP39-204ENST00000409766 FRMPD2Q68DX3 1309 aaPredicted RBP22.85■■□□□ 1.25
USP39-204ENST00000409766 SERPINC1P01008 464 aa22.84■■□□□ 1.25
USP39-204ENST00000409766 CASP1P29466 404 aa22.84■■□□□ 1.25
USP39-204ENST00000409766 UBASH3AP57075 661 aa22.84■■□□□ 1.25
USP39-204ENST00000409766 CCZ1BP86790 482 aa22.84■■□□□ 1.25
USP39-204ENST00000409766 CCZ1P86791 482 aaPredicted RBP22.84■■□□□ 1.25
USP39-204ENST00000409766 KRT25Q7Z3Z0 450 aa22.84■■□□□ 1.25
USP39-204ENST00000409766 DPF2Q92785 391 aa22.84■■□□□ 1.25
USP39-204ENST00000409766 MED15Q96RN5 788 aa22.84■■□□□ 1.25
USP39-204ENST00000409766 TMEM60Q9H2L4 133 aa22.84■■□□□ 1.25
USP39-204ENST00000409766 STK32BQ9NY57 414 aa22.84■■□□□ 1.25
USP39-204ENST00000409766 SIPA1L1O43166 1804 aa22.84■■□□□ 1.25
USP39-204ENST00000409766 ESYT2A0FGR8 921 aa22.84■■□□□ 1.25
USP39-204ENST00000409766 CBFA2T2O43439 604 aa22.84■■□□□ 1.25
USP39-204ENST00000409766 SKILP12757 684 aa22.84■■□□□ 1.25
USP39-204ENST00000409766 ERCC5P28715 1186 aaPredicted RBP22.84■■□□□ 1.25
USP39-204ENST00000409766 CT47A1Q5JQC4 288 aaPredicted RBP22.84■■□□□ 1.25
USP39-204ENST00000409766 MYH4Q9Y623 1939 aa22.84■■□□□ 1.25
USP39-204ENST00000409766 GOLGB1Q14789 3259 aaKnown RBP22.83■■□□□ 1.25
USP39-204ENST00000409766 hCG_1984214I3L0E3 225 aa22.83■■□□□ 1.25
USP39-204ENST00000409766 LAD1O00515 517 aa22.83■■□□□ 1.25
USP39-204ENST00000409766 ZNF18P17022 549 aa22.83■■□□□ 1.25
USP39-204ENST00000409766 DTHD1Q6ZMT9 781 aa22.83■■□□□ 1.25
USP39-204ENST00000409766 ZNF713Q8N859 430 aaPredicted RBP22.83■■□□□ 1.25
USP39-204ENST00000409766 IDI2Q9BXS1 227 aa22.83■■□□□ 1.25
USP39-204ENST00000409766 NFE2L3Q9Y4A8 694 aa22.83■■□□□ 1.25
USP39-204ENST00000409766 SOGA3Q5TF21 947 aa22.82■■□□□ 1.24
USP39-204ENST00000409766 MTRQ99707 1265 aa22.82■■□□□ 1.24
USP39-204ENST00000409766 DHX36Q9H2U1 1008 aaKnown RBP22.82■■□□□ 1.24
USP39-204ENST00000409766 DNAJC18Q9H819 358 aa22.82■■□□□ 1.24
USP39-204ENST00000409766 PRPHP41219 470 aa22.82■■□□□ 1.24
USP39-204ENST00000409766 CACNB3P54284 484 aa22.82■■□□□ 1.24
USP39-204ENST00000409766 ZNF543Q08ER8 600 aa22.82■■□□□ 1.24
USP39-204ENST00000409766 NONOQ15233 471 aaKnown RBP eCLIP22.82■■□□□ 1.24
USP39-204ENST00000409766 AOC3Q16853 763 aa22.82■■□□□ 1.24
USP39-204ENST00000409766 CCDC17Q96LX7 622 aa22.82■■□□□ 1.24
USP39-204ENST00000409766 FAM198AQ9UFP1 575 aa22.82■■□□□ 1.24
USP39-204ENST00000409766 SLURP2P0DP57 97 aa22.81■■□□□ 1.24
USP39-204ENST00000409766 CDC25AP30304 524 aa22.81■■□□□ 1.24
USP39-204ENST00000409766 TXLNAP40222 546 aa22.81■■□□□ 1.24
USP39-204ENST00000409766 TRMT44Q8IYL2 757 aaKnown RBP22.81■■□□□ 1.24
USP39-204ENST00000409766 STAMQ92783 540 aa22.81■■□□□ 1.24
USP39-204ENST00000409766 SERPINA10Q9UK55 444 aa22.81■■□□□ 1.24
USP39-204ENST00000409766 NPM3O75607 178 aaKnown RBP22.81■■□□□ 1.24
USP39-204ENST00000409766 TCP10Q12799 353 aa22.81■■□□□ 1.24
USP39-204ENST00000409766 CFAP100Q494V2 611 aa22.81■■□□□ 1.24
USP39-204ENST00000409766 ARMCX5Q6P1M9 558 aa22.81■■□□□ 1.24
USP39-204ENST00000409766 CCDC150Q8NCX0 1101 aa22.81■■□□□ 1.24
USP39-204ENST00000409766 PRIMPOLQ96LW4 560 aa22.81■■□□□ 1.24
USP39-204ENST00000409766 RBM5P52756 815 aaKnown RBP eCLIP22.8■■□□□ 1.24
USP39-204ENST00000409766 CUL4BQ13620 913 aa22.8■■□□□ 1.24
USP39-204ENST00000409766 DHX8Q14562 1220 aaKnown RBP22.8■■□□□ 1.24
USP39-204ENST00000409766 GPCPD1Q9NPB8 672 aa22.8■■□□□ 1.24
USP39-204ENST00000409766 DDTLA6NHG4 134 aaPredicted RBP22.79■■□□□ 1.24
USP39-204ENST00000409766 MPHOSPH10O00566 681 aaKnown RBP22.79■■□□□ 1.24
USP39-204ENST00000409766 GTPBP6O43824 516 aaPredicted RBP22.79■■□□□ 1.24
USP39-204ENST00000409766 CD44P16070 742 aaKnown RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms