RNA–Protein interactions for RNA: ENST00000409469.5

CUL1-202, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 2,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-202ENST00000409469 MAFGO15525 162 aa11.34□□□□□ -0.59
CUL1-202ENST00000409469 ATP1A3P13637 1013 aa11.34□□□□□ -0.59
CUL1-202ENST00000409469 LMOD1P29536 600 aaPredicted RBP11.34□□□□□ -0.59
CUL1-202ENST00000409469 CNKSR1Q969H4 720 aa11.34□□□□□ -0.59
CUL1-202ENST00000409469 UIMC1Q96RL1 719 aa11.34□□□□□ -0.59
CUL1-202ENST00000409469 COBLO75128 1261 aa11.34□□□□□ -0.59
CUL1-202ENST00000409469 TOP1P11387 765 aaKnown RBP11.34□□□□□ -0.59
CUL1-202ENST00000409469 DPEP1P16444 411 aa11.34□□□□□ -0.59
CUL1-202ENST00000409469 TAL1P17542 331 aaPredicted RBP11.34□□□□□ -0.59
CUL1-202ENST00000409469 NAPAP54920 295 aa11.34□□□□□ -0.59
CUL1-202ENST00000409469 STRIP1Q5VSL9 837 aa11.34□□□□□ -0.59
CUL1-202ENST00000409469 PLA2G4DQ86XP0 818 aa11.34□□□□□ -0.59
CUL1-202ENST00000409469 PRMT6Q96LA8 375 aaPredicted RBP11.34□□□□□ -0.59
CUL1-202ENST00000409469 PLIN2Q99541 437 aa11.34□□□□□ -0.59
CUL1-202ENST00000409469 TMEM260Q9NX78 707 aa11.34□□□□□ -0.59
CUL1-202ENST00000409469 FAM13BQ9NYF5 915 aa11.34□□□□□ -0.59
CUL1-202ENST00000409469 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.34□□□□□ -0.59
CUL1-202ENST00000409469 PCDHA6Q9UN73 950 aa11.34□□□□□ -0.59
CUL1-202ENST00000409469 PCDHA8Q9Y5H6 950 aa11.34□□□□□ -0.59
CUL1-202ENST00000409469 HS1BP3Q53T59 392 aa11.33□□□□□ -0.6
CUL1-202ENST00000409469 HHIPL2Q6UWX4 724 aa11.33□□□□□ -0.6
CUL1-202ENST00000409469 CDAN1Q8IWY9 1227 aa11.33□□□□□ -0.6
CUL1-202ENST00000409469 TRMT44Q8IYL2 757 aaKnown RBP11.33□□□□□ -0.6
CUL1-202ENST00000409469 SMYD4Q8IYR2 804 aaPredicted RBP11.33□□□□□ -0.6
CUL1-202ENST00000409469 TMEM60Q9H2L4 133 aa11.33□□□□□ -0.6
CUL1-202ENST00000409469 PCDHA4Q9UN74 947 aa11.33□□□□□ -0.6
CUL1-202ENST00000409469 NLRP12P59046 1061 aa11.33□□□□□ -0.6
CUL1-202ENST00000409469 SNAP25P60880 206 aa11.33□□□□□ -0.6
CUL1-202ENST00000409469 KIAA2012Q0VF49 1180 aa11.33□□□□□ -0.6
CUL1-202ENST00000409469 POSTNQ15063 836 aa11.33□□□□□ -0.6
CUL1-202ENST00000409469 FILIP1Q7Z7B0 1213 aa11.33□□□□□ -0.6
CUL1-202ENST00000409469 ZDHHC15Q96MV8 337 aa11.33□□□□□ -0.6
CUL1-202ENST00000409469 BARHL2Q9NY43 387 aa11.33□□□□□ -0.6
CUL1-202ENST00000409469 BIN2Q9UBW5 565 aaPredicted RBP11.33□□□□□ -0.6
CUL1-202ENST00000409469 CEP131Q9UPN4 1083 aa11.33□□□□□ -0.6
CUL1-202ENST00000409469 ATF5Q9Y2D1 282 aaPredicted RBP11.33□□□□□ -0.6
CUL1-202ENST00000409469 COL4A5P29400 1685 aa11.32□□□□□ -0.6
CUL1-202ENST00000409469 ACTN4O43707 911 aaKnown RBP11.32□□□□□ -0.6
CUL1-202ENST00000409469 JAG1P78504 1218 aa11.32□□□□□ -0.6
CUL1-202ENST00000409469 MDM2Q00987 491 aaPredicted RBP11.32□□□□□ -0.6
CUL1-202ENST00000409469 JAKMIP3Q5VZ66 844 aa11.32□□□□□ -0.6
CUL1-202ENST00000409469 BLZF1Q9H2G9 400 aa11.32□□□□□ -0.6
CUL1-202ENST00000409469 FOCADQ5VW36 1801 aa11.32□□□□□ -0.6
CUL1-202ENST00000409469 FAM237AA0A1B0GTK4 181 aa11.32□□□□□ -0.6
CUL1-202ENST00000409469 CCDC194A0A1B0GVG4 234 aa11.32□□□□□ -0.6
CUL1-202ENST00000409469 TCP10L2B9ZVM9 353 aa11.32□□□□□ -0.6
CUL1-202ENST00000409469 SF3B2Q13435 895 aaKnown RBP11.32□□□□□ -0.6
CUL1-202ENST00000409469 NCAPHQ15003 741 aa11.32□□□□□ -0.6
CUL1-202ENST00000409469 CCDC96Q2M329 555 aa11.32□□□□□ -0.6
CUL1-202ENST00000409469 CFAP100Q494V2 611 aa11.32□□□□□ -0.6
CUL1-202ENST00000409469 NUP88Q99567 741 aaPredicted RBP11.32□□□□□ -0.6
CUL1-202ENST00000409469 TUBE1Q9UJT0 475 aa11.32□□□□□ -0.6
CUL1-202ENST00000409469 PRDM4Q9UKN5 801 aa11.32□□□□□ -0.6
CUL1-202ENST00000409469 SUGT1Q9Y2Z0 365 aa11.32□□□□□ -0.6
CUL1-202ENST00000409469 SHTN1A0MZ66 631 aa11.31□□□□□ -0.6
CUL1-202ENST00000409469 SMCO2A6NFE2 343 aa11.31□□□□□ -0.6
CUL1-202ENST00000409469 HLA-DOAP06340 250 aa11.31□□□□□ -0.6
CUL1-202ENST00000409469 KCNA3P22001 575 aa11.31□□□□□ -0.6
CUL1-202ENST00000409469 ATP2C1P98194 919 aaPredicted RBP11.31□□□□□ -0.6
CUL1-202ENST00000409469 TIGD1Q96MW7 591 aa11.31□□□□□ -0.6
CUL1-202ENST00000409469 MAN1B1Q9UKM7 699 aa11.31□□□□□ -0.6
CUL1-202ENST00000409469 LOC102724159A0A0B4J2E5 919 aa11.31□□□□□ -0.6
CUL1-202ENST00000409469 M0R2N6 131 aa11.31□□□□□ -0.6
CUL1-202ENST00000409469 SMC2O95347 1197 aa11.31□□□□□ -0.6
CUL1-202ENST00000409469 TTLL1O95922 423 aa11.31□□□□□ -0.6
CUL1-202ENST00000409469 GNAQP50148 359 aa11.31□□□□□ -0.6
CUL1-202ENST00000409469 RRP1BQ14684 758 aaKnown RBP11.31□□□□□ -0.6
CUL1-202ENST00000409469 SEPT2Q15019 361 aa11.31□□□□□ -0.6
CUL1-202ENST00000409469 PWP2Q15269 919 aaKnown RBP11.31□□□□□ -0.6
CUL1-202ENST00000409469 LETM2Q2VYF4 491 aa11.31□□□□□ -0.6
CUL1-202ENST00000409469 RRP36Q96EU6 259 aaKnown RBP11.31□□□□□ -0.6
CUL1-202ENST00000409469 HSD3B7Q9H2F3 369 aa11.31□□□□□ -0.6
CUL1-202ENST00000409469 SEC63Q9UGP8 760 aaKnown RBP11.31□□□□□ -0.6
CUL1-202ENST00000409469 PSMD14O00487 310 aa11.3□□□□□ -0.6
CUL1-202ENST00000409469 PPP1R11O60927 126 aaPredicted RBP11.3□□□□□ -0.6
CUL1-202ENST00000409469 BAG6P46379 1132 aa11.3□□□□□ -0.6
CUL1-202ENST00000409469 FMR1Q06787 632 aaKnown RBP eCLIP11.3□□□□□ -0.61e-7■■■■■ 27.8
CUL1-202ENST00000409469 KARSQ15046 597 aaKnown RBP11.3□□□□□ -0.6
CUL1-202ENST00000409469 LARGE2Q8N3Y3 721 aa11.3□□□□□ -0.6
CUL1-202ENST00000409469 TTLL6Q8N841 843 aa11.3□□□□□ -0.6
CUL1-202ENST00000409469 GJA10Q969M2 543 aa11.3□□□□□ -0.6
CUL1-202ENST00000409469 NAT10Q9H0A0 1025 aaKnown RBP11.3□□□□□ -0.6
CUL1-202ENST00000409469 IFNKQ9P0W0 207 aa11.3□□□□□ -0.6
CUL1-202ENST00000409469 MYH8P13535 1937 aa11.3□□□□□ -0.6
CUL1-202ENST00000409469 QSER1Q2KHR3 1735 aa11.3□□□□□ -0.6
CUL1-202ENST00000409469 IGKV6D-41A0A0C4DH26 115 aa11.3□□□□□ -0.6
CUL1-202ENST00000409469 USP17L10C9JJH3 530 aa11.3□□□□□ -0.6
CUL1-202ENST00000409469 UBE2SQ16763 222 aa11.3□□□□□ -0.6
CUL1-202ENST00000409469 CCDC178Q5BJE1 867 aa11.3□□□□□ -0.6
CUL1-202ENST00000409469 KLHL10Q6JEL2 608 aa11.3□□□□□ -0.6
CUL1-202ENST00000409469 DPF2Q92785 391 aa11.3□□□□□ -0.6
CUL1-202ENST00000409469 SPZ1Q9BXG8 430 aa11.3□□□□□ -0.6
CUL1-202ENST00000409469 XPO4Q9C0E2 1151 aaKnown RBP11.3□□□□□ -0.6
CUL1-202ENST00000409469 PCNTO95613 3336 aa11.3□□□□□ -0.6
CUL1-202ENST00000409469 EEF2P13639 858 aaKnown RBP11.3□□□□□ -0.6
CUL1-202ENST00000409469 HMGB2P26583 209 aaKnown RBP11.3□□□□□ -0.6
CUL1-202ENST00000409469 CALML3P27482 149 aa11.3□□□□□ -0.6
CUL1-202ENST00000409469 CERKLQ49MI3 558 aaPredicted RBP11.3□□□□□ -0.6
CUL1-202ENST00000409469 ADGRF4Q8IZF3 695 aa11.3□□□□□ -0.6
CUL1-202ENST00000409469 SPICE1Q8N0Z3 855 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms