RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 CAPNS2Q96L46 248 aa15.13■□□□□ 0.01
LIMS2-203ENST00000409254 RPAP3Q9H6T3 665 aaPredicted RBP15.13■□□□□ 0.01
LIMS2-203ENST00000409254 FAM217BQ9NTX9 383 aaPredicted RBP15.13■□□□□ 0.01
LIMS2-203ENST00000409254 HOXC10Q9NYD6 342 aa15.13■□□□□ 0.01
LIMS2-203ENST00000409254 PPP1R9AQ9ULJ8 1098 aa15.13■□□□□ 0.01
LIMS2-203ENST00000409254 ADAMTS5Q9UNA0 930 aa15.13■□□□□ 0.01
LIMS2-203ENST00000409254 ZNFX1Q9P2E3 1918 aaKnown RBP15.13■□□□□ 0.01
LIMS2-203ENST00000409254 CNTNAP5Q8WYK1 1306 aa15.13■□□□□ 0.01
LIMS2-203ENST00000409254 ZNF236Q9UL36 1845 aa15.13■□□□□ 0.01
LIMS2-203ENST00000409254 ATP2A1O14983 1001 aa15.12■□□□□ 0.01
LIMS2-203ENST00000409254 FUT2Q10981 343 aa15.12■□□□□ 0.01
LIMS2-203ENST00000409254 COG2Q14746 738 aa15.12■□□□□ 0.01
LIMS2-203ENST00000409254 ZYXQ15942 572 aaKnown RBP15.12■□□□□ 0.01
LIMS2-203ENST00000409254 KIAA1755Q5JYT7 1200 aa15.12■□□□□ 0.01
LIMS2-203ENST00000409254 GADL1Q6ZQY3 521 aa15.12■□□□□ 0.01
LIMS2-203ENST00000409254 TRIM22Q8IYM9 498 aa15.12■□□□□ 0.01
LIMS2-203ENST00000409254 SPICE1Q8N0Z3 855 aa15.12■□□□□ 0.01
LIMS2-203ENST00000409254 BRI3BPQ8WY22 251 aa15.12■□□□□ 0.01
LIMS2-203ENST00000409254 SLF1Q9BQI6 1058 aa15.12■□□□□ 0.01
LIMS2-203ENST00000409254 MYL10Q9BUA6 226 aa15.12■□□□□ 0.01
LIMS2-203ENST00000409254 TANGO6Q9C0B7 1094 aa15.12■□□□□ 0.01
LIMS2-203ENST00000409254 TMEM232C9JQI7 657 aa15.11■□□□□ 0.01
LIMS2-203ENST00000409254 LARGE1O95461 756 aa15.11■□□□□ 0.01
LIMS2-203ENST00000409254 OSBPP22059 807 aa15.11■□□□□ 0.01
LIMS2-203ENST00000409254 CDC27P30260 824 aa15.11■□□□□ 0.01
LIMS2-203ENST00000409254 GCLCP48506 637 aaPredicted RBP15.11■□□□□ 0.01
LIMS2-203ENST00000409254 IRX3P78415 501 aaPredicted RBP15.11■□□□□ 0.01
LIMS2-203ENST00000409254 SYDE2Q5VT97 1194 aa15.11■□□□□ 0.01
LIMS2-203ENST00000409254 GPAT2Q6NUI2 795 aa15.11■□□□□ 0.01
LIMS2-203ENST00000409254 SMARCC2Q8TAQ2 1214 aa15.11■□□□□ 0.01
LIMS2-203ENST00000409254 WASF1Q92558 559 aa15.11■□□□□ 0.01
LIMS2-203ENST00000409254 PARK7Q99497 189 aaKnown RBP15.11■□□□□ 0.01
LIMS2-203ENST00000409254 CFHR5Q9BXR6 569 aa15.11■□□□□ 0.01
LIMS2-203ENST00000409254 NAP1L2Q9ULW6 460 aaPredicted RBP15.11■□□□□ 0.01
LIMS2-203ENST00000409254 CASP8AP2Q9UKL3 1982 aa15.11■□□□□ 0.01
LIMS2-203ENST00000409254 PLXNB2O15031 1838 aa15.1■□□□□ 0.01
LIMS2-203ENST00000409254 MYH15Q9Y2K3 1946 aa15.1■□□□□ 0.01
LIMS2-203ENST00000409254 BTBD19C9JJ37 291 aa15.1■□□□□ 0.01
LIMS2-203ENST00000409254 PRPF3O43395 683 aaKnown RBP15.1■□□□□ 0.01
LIMS2-203ENST00000409254 FLOT1O75955 427 aa15.1■□□□□ 0.01
LIMS2-203ENST00000409254 DSG3P32926 999 aa15.1■□□□□ 0.01
LIMS2-203ENST00000409254 COPB2P35606 906 aa15.1■□□□□ 0.01
LIMS2-203ENST00000409254 ADD1P35611 737 aaKnown RBP15.1■□□□□ 0.01
LIMS2-203ENST00000409254 KCTD1Q719H9 257 aa15.1■□□□□ 0.01
LIMS2-203ENST00000409254 STAG2Q8N3U4 1231 aa15.1■□□□□ 0.01
LIMS2-203ENST00000409254 NSUN7Q8NE18 718 aaKnown RBP15.1■□□□□ 0.01
LIMS2-203ENST00000409254 RANBP17Q9H2T7 1088 aaKnown RBP15.1■□□□□ 0.01
LIMS2-203ENST00000409254 SLC38A10Q9HBR0 1119 aa15.1■□□□□ 0.01
LIMS2-203ENST00000409254 SEC63Q9UGP8 760 aaKnown RBP15.1■□□□□ 0.01
LIMS2-203ENST00000409254 RBM19Q9Y4C8 960 aaKnown RBP15.1■□□□□ 0.01
LIMS2-203ENST00000409254 WDR33Q9C0J8 1336 aaKnown RBP15.1■□□□□ 0.01
LIMS2-203ENST00000409254 SPDYE16A6NNV3 312 aaPredicted RBP15.09■□□□□ 0.01
LIMS2-203ENST00000409254 ZBTB5O15062 677 aa15.09■□□□□ 0.01
LIMS2-203ENST00000409254 RAD21O60216 631 aa15.09■□□□□ 0.01
LIMS2-203ENST00000409254 DEXIO95424 95 aa15.09■□□□□ 0.01
LIMS2-203ENST00000409254 FMNL1O95466 1100 aaPredicted RBP15.09■□□□□ 0.01
LIMS2-203ENST00000409254 AKAP17AQ02040 695 aaKnown RBP15.09■□□□□ 0.01
LIMS2-203ENST00000409254 IKQ13123 557 aaPredicted RBP15.09■□□□□ 0.01
LIMS2-203ENST00000409254 TREML2Q5T2D2 321 aa15.09■□□□□ 0.01
LIMS2-203ENST00000409254 CYP4F22Q6NT55 531 aa15.09■□□□□ 0.01
LIMS2-203ENST00000409254 PPP1R18Q6NYC8 613 aa15.09■□□□□ 0.01
LIMS2-203ENST00000409254 NBPF11Q86T75 865 aa15.09■□□□□ 0.01
LIMS2-203ENST00000409254 IFNL1Q8IU54 200 aa15.09■□□□□ 0.01
LIMS2-203ENST00000409254 SRBD1Q8N5C6 995 aaKnown RBP15.09■□□□□ 0.01
LIMS2-203ENST00000409254 RRP36Q96EU6 259 aaKnown RBP15.09■□□□□ 0.01
LIMS2-203ENST00000409254 ASCC2Q9H1I8 757 aaPredicted RBP15.09■□□□□ 0.01
LIMS2-203ENST00000409254 PRR12Q9ULL5 1215 aa15.09■□□□□ 0.01
LIMS2-203ENST00000409254 PLXNA1Q9UIW2 1896 aa15.09■□□□□ 0.01
LIMS2-203ENST00000409254 FRMPD2Q68DX3 1309 aaPredicted RBP15.09■□□□□ 0.01
LIMS2-203ENST00000409254 DOCK3Q8IZD9 2030 aa15.09■□□□□ 0.01
LIMS2-203ENST00000409254 PNMA6FA0A0J9YX94 578 aa15.08■□□□□ 0
LIMS2-203ENST00000409254 PDHXO00330 501 aa15.08■□□□□ 0
LIMS2-203ENST00000409254 VWA5AO00534 786 aa15.08■□□□□ 0
LIMS2-203ENST00000409254 CYTH3O43739 400 aa15.08■□□□□ 0
LIMS2-203ENST00000409254 CAPN15O75808 1086 aa15.08■□□□□ 0
LIMS2-203ENST00000409254 PLEKHA8P1O95397 391 aa15.08■□□□□ 0
LIMS2-203ENST00000409254 RXRAP19793 462 aa15.08■□□□□ 0
LIMS2-203ENST00000409254 HERVK_113P62684 666 aa15.08■□□□□ 0
LIMS2-203ENST00000409254 CCT2P78371 535 aaKnown RBP15.08■□□□□ 0
LIMS2-203ENST00000409254 SSRP1Q08945 709 aaKnown RBP15.08■□□□□ 0
LIMS2-203ENST00000409254 ST3GAL1Q11201 340 aa15.08■□□□□ 0
LIMS2-203ENST00000409254 STK3Q13188 491 aa15.08■□□□□ 0
LIMS2-203ENST00000409254 NOL8Q76FK4 1167 aaKnown RBP15.08■□□□□ 0
LIMS2-203ENST00000409254 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.08■□□□□ 0
LIMS2-203ENST00000409254 CCDC83Q8IWF9 413 aa15.08■□□□□ 0
LIMS2-203ENST00000409254 ADGRF4Q8IZF3 695 aa15.08■□□□□ 0
LIMS2-203ENST00000409254 SAMD3Q8N6K7 520 aa15.08■□□□□ 0
LIMS2-203ENST00000409254 CCDC12Q8WUD4 166 aaPredicted RBP15.08■□□□□ 0
LIMS2-203ENST00000409254 NUP88Q99567 741 aaPredicted RBP15.08■□□□□ 0
LIMS2-203ENST00000409254 NCOA5Q9HCD5 579 aaKnown RBP15.08■□□□□ 0
LIMS2-203ENST00000409254 GPCPD1Q9NPB8 672 aa15.08■□□□□ 0
LIMS2-203ENST00000409254 SH3GLB2Q9NR46 395 aa15.08■□□□□ 0
LIMS2-203ENST00000409254 RABGAP1Q9Y3P9 1069 aa15.08■□□□□ 0
LIMS2-203ENST00000409254 PTPDC1A2A3K4 754 aa15.07■□□□□ 0
LIMS2-203ENST00000409254 ZBED4O75132 1171 aa15.07■□□□□ 0
LIMS2-203ENST00000409254 GOLGA8HP0CJ92 632 aa15.07■□□□□ 0
LIMS2-203ENST00000409254 PDCP20941 246 aa15.07■□□□□ 0
LIMS2-203ENST00000409254 PFKFB3Q16875 520 aaPredicted RBP15.07■□□□□ 0
LIMS2-203ENST00000409254 TKFCQ3LXA3 575 aa15.07■□□□□ 0
LIMS2-203ENST00000409254 PAXIP1Q6ZW49 1069 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms