RNA–Protein interactions for RNA: ENST00000409047.2

TUBA3D-202, Transcript of tubulin alpha 3d, humanhuman

TSL 2

Gene TUBA3D, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-202ENST00000409047 CLASRPQ8N2M8 674 aaKnown RBP15.78■□□□□ 0.12
TUBA3D-202ENST00000409047 KIF1BPQ96EK5 621 aa15.78■□□□□ 0.12
TUBA3D-202ENST00000409047 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.78■□□□□ 0.12
TUBA3D-202ENST00000409047 KANSL2Q9H9L4 492 aa15.78■□□□□ 0.12
TUBA3D-202ENST00000409047 PAG1Q9NWQ8 432 aa15.78■□□□□ 0.12
TUBA3D-202ENST00000409047 SYNGAP1Q96PV0 1343 aa15.77■□□□□ 0.12
TUBA3D-202ENST00000409047 MYH4Q9Y623 1939 aa15.77■□□□□ 0.12
TUBA3D-202ENST00000409047 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.77■□□□□ 0.12
TUBA3D-202ENST00000409047 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.77■□□□□ 0.12
TUBA3D-202ENST00000409047 TIMP1P01033 207 aa15.77■□□□□ 0.12
TUBA3D-202ENST00000409047 CDK7P50613 346 aa15.77■□□□□ 0.12
TUBA3D-202ENST00000409047 KCNA10Q16322 511 aa15.77■□□□□ 0.12
TUBA3D-202ENST00000409047 HSP90AB4PQ58FF6 505 aa15.77■□□□□ 0.12
TUBA3D-202ENST00000409047 NUP88Q99567 741 aaPredicted RBP15.77■□□□□ 0.12
TUBA3D-202ENST00000409047 BOLA2Q9H3K6 86 aa15.77■□□□□ 0.12
TUBA3D-202ENST00000409047 ZNF576Q9H609 170 aa15.77■□□□□ 0.12
TUBA3D-202ENST00000409047 STARD7Q9NQZ5 370 aa15.77■□□□□ 0.12
TUBA3D-202ENST00000409047 GBF1Q92538 1859 aa15.77■□□□□ 0.11
TUBA3D-202ENST00000409047 MOXD2PA6NHM9 499 aa15.76■□□□□ 0.11
TUBA3D-202ENST00000409047 APBB1O00213 710 aa15.76■□□□□ 0.11
TUBA3D-202ENST00000409047 ATP5JP18859 108 aa15.76■□□□□ 0.11
TUBA3D-202ENST00000409047 CST5P28325 142 aaPredicted RBP15.76■□□□□ 0.11
TUBA3D-202ENST00000409047 PBX2P40425 430 aa15.76■□□□□ 0.11
TUBA3D-202ENST00000409047 TMEM240Q5SV17 173 aa15.76■□□□□ 0.11
TUBA3D-202ENST00000409047 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.76■□□□□ 0.11
TUBA3D-202ENST00000409047 MSL3Q8N5Y2 521 aaKnown RBP15.76■□□□□ 0.11
TUBA3D-202ENST00000409047 HAUS7Q99871 368 aa15.76■□□□□ 0.11
TUBA3D-202ENST00000409047 PUS7LQ9H0K6 701 aaKnown RBP15.76■□□□□ 0.11
TUBA3D-202ENST00000409047 NCOR1O75376 2440 aa15.75■□□□□ 0.11
TUBA3D-202ENST00000409047 GRXCR1A8MXD5 290 aa15.75■□□□□ 0.11
TUBA3D-202ENST00000409047 CTAGE5O15320 804 aa15.75■□□□□ 0.11
TUBA3D-202ENST00000409047 DUSP11O75319 330 aaKnown RBP15.75■□□□□ 0.11
TUBA3D-202ENST00000409047 IFIT2P09913 472 aaKnown RBP15.75■□□□□ 0.11
TUBA3D-202ENST00000409047 RASA1P20936 1047 aa15.75■□□□□ 0.11
TUBA3D-202ENST00000409047 COPB2P35606 906 aa15.75■□□□□ 0.11
TUBA3D-202ENST00000409047 UBE3CQ15386 1083 aa15.75■□□□□ 0.11
TUBA3D-202ENST00000409047 MFSD5Q6N075 450 aa15.75■□□□□ 0.11
TUBA3D-202ENST00000409047 TIFAQ96CG3 184 aa15.75■□□□□ 0.11
TUBA3D-202ENST00000409047 TEX13BQ9BXU2 312 aa15.75■□□□□ 0.11
TUBA3D-202ENST00000409047 PBX4Q9BYU1 374 aa15.75■□□□□ 0.11
TUBA3D-202ENST00000409047 KATNBL1Q9H079 304 aa15.75■□□□□ 0.11
TUBA3D-202ENST00000409047 UPF3AQ9H1J1 476 aaKnown RBP15.75■□□□□ 0.11
TUBA3D-202ENST00000409047 GOPCQ9HD26 462 aa15.75■□□□□ 0.11
TUBA3D-202ENST00000409047 CNPY2Q9Y2B0 182 aa15.75■□□□□ 0.11
TUBA3D-202ENST00000409047 DCDC2CA8MYV0 355 aa15.74■□□□□ 0.11
TUBA3D-202ENST00000409047 ATP2A1O14983 1001 aa15.74■□□□□ 0.11
TUBA3D-202ENST00000409047 TJAP1Q5JTD0 557 aa15.74■□□□□ 0.11
TUBA3D-202ENST00000409047 SNRNP48Q6IEG0 339 aaKnown RBP15.74■□□□□ 0.11
TUBA3D-202ENST00000409047 ZNF467Q7Z7K2 595 aaPredicted RBP15.74■□□□□ 0.11
TUBA3D-202ENST00000409047 NUP133Q8WUM0 1156 aa15.74■□□□□ 0.11
TUBA3D-202ENST00000409047 SYMPKQ92797 1274 aaKnown RBP15.74■□□□□ 0.11
TUBA3D-202ENST00000409047 SLF1Q9BQI6 1058 aa15.74■□□□□ 0.11
TUBA3D-202ENST00000409047 FAM184BQ9ULE4 1060 aa15.74■□□□□ 0.11
TUBA3D-202ENST00000409047 SLC4A4Q9Y6R1 1079 aa15.74■□□□□ 0.11
TUBA3D-202ENST00000409047 ELP1O95163 1332 aa15.73■□□□□ 0.11
TUBA3D-202ENST00000409047 IGKV6D-41A0A0C4DH26 115 aa15.73■□□□□ 0.11
TUBA3D-202ENST00000409047 F5H6K3 240 aa15.73■□□□□ 0.11
TUBA3D-202ENST00000409047 NDUFB10O96000 172 aa15.73■□□□□ 0.11
TUBA3D-202ENST00000409047 ASGR1P07306 291 aa15.73■□□□□ 0.11
TUBA3D-202ENST00000409047 NKX3-2P78367 333 aa15.73■□□□□ 0.11
TUBA3D-202ENST00000409047 KLRC3Q07444 240 aa15.73■□□□□ 0.11
TUBA3D-202ENST00000409047 FAM126BQ8IXS8 530 aa15.73■□□□□ 0.11
TUBA3D-202ENST00000409047 ZBTB40Q9NUA8 1239 aa15.73■□□□□ 0.11
TUBA3D-202ENST00000409047 NYAP2Q9P242 653 aa15.73■□□□□ 0.11
TUBA3D-202ENST00000409047 ZHX1Q9UKY1 873 aaPredicted RBP15.73■□□□□ 0.11
TUBA3D-202ENST00000409047 TRANK1O15050 2925 aa15.73■□□□□ 0.11
TUBA3D-202ENST00000409047 LRRC37A2A6NM11 1700 aa15.72■□□□□ 0.11
TUBA3D-202ENST00000409047 CSF2RAP15509 400 aa15.72■□□□□ 0.11
TUBA3D-202ENST00000409047 GJA9P57773 515 aa15.72■□□□□ 0.11
TUBA3D-202ENST00000409047 ACVR2BQ13705 512 aa15.72■□□□□ 0.11
TUBA3D-202ENST00000409047 ADGRE1Q14246 886 aa15.72■□□□□ 0.11
TUBA3D-202ENST00000409047 SBK1Q52WX2 424 aa15.72■□□□□ 0.11
TUBA3D-202ENST00000409047 RPAP2Q8IXW5 612 aaPredicted RBP15.72■□□□□ 0.11
TUBA3D-202ENST00000409047 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.72■□□□□ 0.11
TUBA3D-202ENST00000409047 ASTN1O14525 1302 aa15.71■□□□□ 0.11
TUBA3D-202ENST00000409047 LCTP09848 1927 aa15.71■□□□□ 0.11
TUBA3D-202ENST00000409047 GSG1L2A8MUP6 293 aa15.71■□□□□ 0.11
TUBA3D-202ENST00000409047 ARVCFO00192 962 aa15.71■□□□□ 0.11
TUBA3D-202ENST00000409047 RAB11FIP3O75154 756 aa15.71■□□□□ 0.11
TUBA3D-202ENST00000409047 CD4P01730 458 aa15.71■□□□□ 0.11
TUBA3D-202ENST00000409047 ACRP10323 421 aa15.71■□□□□ 0.11
TUBA3D-202ENST00000409047 CCDC144BQ3MJ40 725 aa15.71■□□□□ 0.11
TUBA3D-202ENST00000409047 PRPF38AQ8NAV1 312 aaKnown RBP15.71■□□□□ 0.11
TUBA3D-202ENST00000409047 GLT1D1Q96MS3 346 aa15.71■□□□□ 0.11
TUBA3D-202ENST00000409047 STRBPQ96SI9 672 aaKnown RBP15.71■□□□□ 0.11
TUBA3D-202ENST00000409047 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.71■□□□□ 0.11
TUBA3D-202ENST00000409047 SLC38A10Q9HBR0 1119 aa15.71■□□□□ 0.11
TUBA3D-202ENST00000409047 TNFRSF10AO00220 468 aa15.7■□□□□ 0.1
TUBA3D-202ENST00000409047 RAD21O60216 631 aa15.7■□□□□ 0.1
TUBA3D-202ENST00000409047 C6orf222P0C671 652 aaPredicted RBP15.7■□□□□ 0.1
TUBA3D-202ENST00000409047 PPIGQ13427 754 aaKnown RBP eCLIP15.7■□□□□ 0.1
TUBA3D-202ENST00000409047 ZNF365Q70YC5 407 aa15.7■□□□□ 0.1
TUBA3D-202ENST00000409047 ARMCX2Q7L311 632 aa15.7■□□□□ 0.1
TUBA3D-202ENST00000409047 SLC43A3Q8NBI5 491 aa15.7■□□□□ 0.1
TUBA3D-202ENST00000409047 VWCEQ96DN2 955 aa15.7■□□□□ 0.1
TUBA3D-202ENST00000409047 DDX11Q96FC9 970 aa15.7■□□□□ 0.1
TUBA3D-202ENST00000409047 BCL11AQ9H165 835 aa15.7■□□□□ 0.1
TUBA3D-202ENST00000409047 ABHD16BQ9H3Z7 469 aa15.7■□□□□ 0.1
TUBA3D-202ENST00000409047 PRDM12Q9H4Q4 367 aa15.7■□□□□ 0.1
TUBA3D-202ENST00000409047 RAVER2Q9HCJ3 691 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms