RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 TRIOBPQ9H2D6 2365 aa11.48□□□□□ -0.57
NIF3L1-202ENST00000409020 RPTORQ8N122 1335 aa11.48□□□□□ -0.57
NIF3L1-202ENST00000409020 PARP14Q460N5 1801 aa11.48□□□□□ -0.57
NIF3L1-202ENST00000409020 NDUFB10O96000 172 aa11.47□□□□□ -0.57
NIF3L1-202ENST00000409020 CCNA1P78396 465 aa11.47□□□□□ -0.57
NIF3L1-202ENST00000409020 NUCB1Q02818 461 aa11.47□□□□□ -0.57
NIF3L1-202ENST00000409020 PPARAQ07869 468 aa11.47□□□□□ -0.57
NIF3L1-202ENST00000409020 AXDND1Q5T1B0 1012 aaPredicted RBP11.47□□□□□ -0.57
NIF3L1-202ENST00000409020 RASGRP2Q7LDG7 609 aa11.47□□□□□ -0.57
NIF3L1-202ENST00000409020 CHD1LQ86WJ1 897 aa11.47□□□□□ -0.57
NIF3L1-202ENST00000409020 HMX1Q9NP08 348 aaPredicted RBP11.47□□□□□ -0.57
NIF3L1-202ENST00000409020 CLIP2Q9UDT6 1046 aa11.47□□□□□ -0.57
NIF3L1-202ENST00000409020 SLC15A5A6NIM6 579 aa11.46□□□□□ -0.57
NIF3L1-202ENST00000409020 F5H6K3 240 aa11.46□□□□□ -0.57
NIF3L1-202ENST00000409020 NMT2O60551 498 aa11.46□□□□□ -0.57
NIF3L1-202ENST00000409020 COBLO75128 1261 aa11.46□□□□□ -0.57
NIF3L1-202ENST00000409020 PTMSP20962 102 aa11.46□□□□□ -0.57
NIF3L1-202ENST00000409020 ADORA2AP29274 412 aa11.46□□□□□ -0.57
NIF3L1-202ENST00000409020 CYP2C19P33261 490 aa11.46□□□□□ -0.57
NIF3L1-202ENST00000409020 KLRC3Q07444 240 aa11.46□□□□□ -0.57
NIF3L1-202ENST00000409020 NMIQ13287 307 aaPredicted RBP11.46□□□□□ -0.57
NIF3L1-202ENST00000409020 LRRFIP1Q32MZ4 808 aaKnown RBP11.46□□□□□ -0.57
NIF3L1-202ENST00000409020 LHX8Q68G74 356 aa11.46□□□□□ -0.57
NIF3L1-202ENST00000409020 PLEKHM2Q8IWE5 1019 aa11.46□□□□□ -0.57
NIF3L1-202ENST00000409020 TRPV1Q8NER1 839 aa11.46□□□□□ -0.57
NIF3L1-202ENST00000409020 REPS2Q8NFH8 660 aa11.46□□□□□ -0.57
NIF3L1-202ENST00000409020 DPF3Q92784 378 aa11.46□□□□□ -0.57
NIF3L1-202ENST00000409020 RWDD1Q9H446 243 aaPredicted RBP11.46□□□□□ -0.57
NIF3L1-202ENST00000409020 MTMR4Q9NYA4 1195 aa11.46□□□□□ -0.57
NIF3L1-202ENST00000409020 TRIM6-TRIM34B2RNG4 842 aa11.46□□□□□ -0.58
NIF3L1-202ENST00000409020 IGHA2P01877 340 aa11.46□□□□□ -0.58
NIF3L1-202ENST00000409020 TFAP4Q01664 338 aa11.46□□□□□ -0.58
NIF3L1-202ENST00000409020 NCAPG2Q86XI2 1143 aa11.46□□□□□ -0.58
NIF3L1-202ENST00000409020 ZNF444Q8N0Y2 327 aaPredicted RBP11.46□□□□□ -0.58
NIF3L1-202ENST00000409020 NACAP1Q9BZK3 213 aa11.46□□□□□ -0.58
NIF3L1-202ENST00000409020 GOPCQ9HD26 462 aa11.46□□□□□ -0.58
NIF3L1-202ENST00000409020 PPP1R9AQ9ULJ8 1098 aa11.46□□□□□ -0.58
NIF3L1-202ENST00000409020 ADAMTS5Q9UNA0 930 aa11.46□□□□□ -0.58
NIF3L1-202ENST00000409020 COLQQ9Y215 455 aaPredicted RBP11.46□□□□□ -0.58
NIF3L1-202ENST00000409020 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.46□□□□□ -0.58
NIF3L1-202ENST00000409020 COL11A1P12107 1806 aaPredicted RBP11.45□□□□□ -0.58
NIF3L1-202ENST00000409020 PLIN4Q96Q06 1357 aa11.45□□□□□ -0.58
NIF3L1-202ENST00000409020 VWA5AO00534 786 aa11.45□□□□□ -0.58
NIF3L1-202ENST00000409020 PGK2P07205 417 aa11.45□□□□□ -0.58
NIF3L1-202ENST00000409020 HOXC6P09630 235 aa11.45□□□□□ -0.58
NIF3L1-202ENST00000409020 PRR29P0C7W0 189 aa11.45□□□□□ -0.58
NIF3L1-202ENST00000409020 RILPL2Q969X0 211 aa11.45□□□□□ -0.58
NIF3L1-202ENST00000409020 NYAP2Q9P242 653 aa11.45□□□□□ -0.58
NIF3L1-202ENST00000409020 ZNF214Q9UL59 606 aaPredicted RBP11.45□□□□□ -0.58
NIF3L1-202ENST00000409020 OGDHLQ9ULD0 1010 aa11.45□□□□□ -0.58
NIF3L1-202ENST00000409020 IVNS1ABPQ9Y6Y0 642 aa11.45□□□□□ -0.58
NIF3L1-202ENST00000409020 SLC34A2O95436 690 aa11.44□□□□□ -0.58
NIF3L1-202ENST00000409020 TSPY3P0CV98 308 aa11.44□□□□□ -0.58
NIF3L1-202ENST00000409020 TSPY8P0CW00 308 aa11.44□□□□□ -0.58
NIF3L1-202ENST00000409020 PDE4AP27815 886 aa11.44□□□□□ -0.58
NIF3L1-202ENST00000409020 MB21D1Q8N884 522 aa11.44□□□□□ -0.58
NIF3L1-202ENST00000409020 SHCBP1Q8NEM2 672 aa11.44□□□□□ -0.58
NIF3L1-202ENST00000409020 NEDD1Q8NHV4 660 aa11.44□□□□□ -0.58
NIF3L1-202ENST00000409020 NBPF3Q9H094 633 aa11.44□□□□□ -0.58
NIF3L1-202ENST00000409020 IL17RBQ9NRM6 502 aa11.44□□□□□ -0.58
NIF3L1-202ENST00000409020 HELLSQ9NRZ9 838 aa11.44□□□□□ -0.58
NIF3L1-202ENST00000409020 RIPK3Q9Y572 518 aa11.44□□□□□ -0.58
NIF3L1-202ENST00000409020 UNC80Q8N2C7 3258 aa11.44□□□□□ -0.58
NIF3L1-202ENST00000409020 ALPK3Q96L96 1907 aa11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 PFASO15067 1338 aa11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 ZNF236Q9UL36 1845 aa11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 CLSTN1O94985 981 aa11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 FGAP02671 866 aa11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 MCCP23508 829 aa11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 PDE4BQ07343 736 aa11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 MCMDC2Q4G0Z9 681 aa11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 HABP4Q5JVS0 413 aaKnown RBP11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 PRAMEF19Q5SWL8 479 aa11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 L1TD1Q5T7N2 865 aaKnown RBP11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 CHRDL2Q6WN34 429 aa11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 MTERF4Q7Z6M4 381 aaKnown RBP11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 DPP9Q86TI2 863 aa11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 MKL1Q969V6 931 aa11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 SLF1Q9BQI6 1058 aa11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 VCANP13611 3396 aa11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 KIF20AO95235 890 aa11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 TTLL1O95922 423 aa11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 HSPD1P10809 573 aaKnown RBP11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 STAT3P40763 770 aa11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 HAND2P61296 217 aa11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 ANO1Q5XXA6 986 aa11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 NECAB2Q7Z6G3 386 aa11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 RIOX2Q8IUF8 465 aa11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 TRMT44Q8IYL2 757 aaKnown RBP11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 KIFC2Q96AC6 838 aa11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 IL25Q9H293 177 aa11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 OSBPL3Q9H4L5 887 aa11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 MROH8Q9H579 483 aa11.43□□□□□ -0.58
NIF3L1-202ENST00000409020 MYH4Q9Y623 1939 aa11.42□□□□□ -0.58
NIF3L1-202ENST00000409020 CYBAP13498 195 aa11.42□□□□□ -0.58
NIF3L1-202ENST00000409020 TAL1P17542 331 aaPredicted RBP11.42□□□□□ -0.58
NIF3L1-202ENST00000409020 SDSP20132 328 aa11.42□□□□□ -0.58
NIF3L1-202ENST00000409020 CNGA1P29973 690 aa11.42□□□□□ -0.58
NIF3L1-202ENST00000409020 SLC4A3P48751 1232 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms