RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 SNHG28P0DPA3 235 aa28.1■■■□□ 2.09
DNMT3A-206ENST00000406659 ATP2B2Q01814 1243 aa28.1■■■□□ 2.09
DNMT3A-206ENST00000406659 SMCO2A6NFE2 343 aa28.09■■■□□ 2.09
DNMT3A-206ENST00000406659 DDTLA6NHG4 134 aaPredicted RBP28.09■■■□□ 2.09
DNMT3A-206ENST00000406659 GNA11P29992 359 aa28.09■■■□□ 2.09
DNMT3A-206ENST00000406659 CFAP100Q494V2 611 aa28.09■■■□□ 2.09
DNMT3A-206ENST00000406659 DHX58Q96C10 678 aa28.09■■■□□ 2.09
DNMT3A-206ENST00000406659 GPCPD1Q9NPB8 672 aa28.09■■■□□ 2.09
DNMT3A-206ENST00000406659 ARL6IP4Q66PJ3 421 aaKnown RBP28.09■■■□□ 2.09
DNMT3A-206ENST00000406659 SMARCE1Q969G3 411 aa28.09■■■□□ 2.09
DNMT3A-206ENST00000406659 MRFAP1L1Q96HT8 127 aa28.09■■■□□ 2.09
DNMT3A-206ENST00000406659 hCG_1984214I3L0E3 225 aa28.08■■■□□ 2.09
DNMT3A-206ENST00000406659 DPEP1P16444 411 aa28.08■■■□□ 2.09
DNMT3A-206ENST00000406659 KRT25Q7Z3Z0 450 aa28.08■■■□□ 2.09
DNMT3A-206ENST00000406659 ZNF713Q8N859 430 aaPredicted RBP28.08■■■□□ 2.09
DNMT3A-206ENST00000406659 PSMD1Q99460 953 aa28.08■■■□□ 2.09
DNMT3A-206ENST00000406659 TDRD3Q9H7E2 651 aaKnown RBP28.08■■■□□ 2.09
DNMT3A-206ENST00000406659 IKBKBO14920 756 aa28.07■■■□□ 2.08
DNMT3A-206ENST00000406659 PRR29P0C7W0 189 aa28.07■■■□□ 2.08
DNMT3A-206ENST00000406659 ZNF543Q08ER8 600 aa28.07■■■□□ 2.08
DNMT3A-206ENST00000406659 INF2Q27J81 1249 aa28.07■■■□□ 2.08
DNMT3A-206ENST00000406659 CERKLQ49MI3 558 aaPredicted RBP28.07■■■□□ 2.08
DNMT3A-206ENST00000406659 SH3BP5LQ7L8J4 393 aa28.07■■■□□ 2.08
DNMT3A-206ENST00000406659 DNAJC18Q9H819 358 aa28.07■■■□□ 2.08
DNMT3A-206ENST00000406659 SLFN14P0C7P3 912 aa28.06■■■□□ 2.08
DNMT3A-206ENST00000406659 C4orf32Q8N8J7 132 aa28.06■■■□□ 2.08
DNMT3A-206ENST00000406659 MAN1B1Q9UKM7 699 aa28.06■■■□□ 2.08
DNMT3A-206ENST00000406659 A0A087X0B3 334 aa28.06■■■□□ 2.08
DNMT3A-206ENST00000406659 SLURP2P0DP57 97 aa28.06■■■□□ 2.08
DNMT3A-206ENST00000406659 NT5DC1Q5TFE4 455 aa28.06■■■□□ 2.08
DNMT3A-206ENST00000406659 GRAMD1CQ8IYS0 662 aa28.06■■■□□ 2.08
DNMT3A-206ENST00000406659 LARGE2Q8N3Y3 721 aa28.06■■■□□ 2.08
DNMT3A-206ENST00000406659 FAM196BA6NMK8 535 aa28.05■■■□□ 2.08
DNMT3A-206ENST00000406659 ENTPD3O75355 529 aa28.05■■■□□ 2.08
DNMT3A-206ENST00000406659 SMC2O95347 1197 aa28.05■■■□□ 2.08
DNMT3A-206ENST00000406659 LONP1P36776 959 aaKnown RBP28.05■■■□□ 2.08
DNMT3A-206ENST00000406659 CCDC96Q2M329 555 aa28.05■■■□□ 2.08
DNMT3A-206ENST00000406659 GPATCH4Q5T3I0 446 aaKnown RBP28.05■■■□□ 2.08
DNMT3A-206ENST00000406659 PYM1Q9BRP8 204 aaKnown RBP28.05■■■□□ 2.08
DNMT3A-206ENST00000406659 ESYT2A0FGR8 921 aa28.04■■■□□ 2.08
DNMT3A-206ENST00000406659 KCNA3P22001 575 aa28.04■■■□□ 2.08
DNMT3A-206ENST00000406659 PTGS1P23219 599 aa28.04■■■□□ 2.08
DNMT3A-206ENST00000406659 SARSP49591 514 aaKnown RBP28.04■■■□□ 2.08
DNMT3A-206ENST00000406659 NONOQ15233 471 aaKnown RBP eCLIP28.04■■■□□ 2.08
DNMT3A-206ENST00000406659 IL17AQ16552 155 aa28.04■■■□□ 2.08
DNMT3A-206ENST00000406659 RSBN1LQ6PCB5 846 aaPredicted RBP28.04■■■□□ 2.08
DNMT3A-206ENST00000406659 CCDC186Q7Z3E2 898 aa28.04■■■□□ 2.08
DNMT3A-206ENST00000406659 PRMT6Q96LA8 375 aaPredicted RBP28.04■■■□□ 2.08
DNMT3A-206ENST00000406659 GREB1LQ9C091 1923 aaPredicted RBP28.04■■■□□ 2.08
DNMT3A-206ENST00000406659 NCAPHQ15003 741 aa28.04■■■□□ 2.08
DNMT3A-206ENST00000406659 TRIML1Q8N9V2 468 aa28.04■■■□□ 2.08
DNMT3A-206ENST00000406659 KANSL2Q9H9L4 492 aa28.04■■■□□ 2.08
DNMT3A-206ENST00000406659 PAGE5Q96GU1 130 aa28.03■■■□□ 2.08
DNMT3A-206ENST00000406659 ZNF277Q9NRM2 450 aaPredicted RBP28.03■■■□□ 2.08
DNMT3A-206ENST00000406659 NYAP2Q9P242 653 aa28.03■■■□□ 2.08
DNMT3A-206ENST00000406659 SIPA1L1O43166 1804 aa28.03■■■□□ 2.08
DNMT3A-206ENST00000406659 MYH4Q9Y623 1939 aa28.02■■■□□ 2.08
DNMT3A-206ENST00000406659 RAD17O75943 681 aa28.02■■■□□ 2.08
DNMT3A-206ENST00000406659 MYL5Q02045 173 aa28.02■■■□□ 2.08
DNMT3A-206ENST00000406659 TATDN1Q6P1N9 297 aa28.02■■■□□ 2.08
DNMT3A-206ENST00000406659 DTHD1Q6ZMT9 781 aa28.02■■■□□ 2.08
DNMT3A-206ENST00000406659 ADGRF4Q8IZF3 695 aa28.02■■■□□ 2.08
DNMT3A-206ENST00000406659 IQUBQ8NA54 791 aa28.02■■■□□ 2.08
DNMT3A-206ENST00000406659 KCNF1Q9H3M0 494 aa28.02■■■□□ 2.08
DNMT3A-206ENST00000406659 TMOD2Q9NZR1 351 aa28.02■■■□□ 2.08
DNMT3A-206ENST00000406659 NRBP1Q9UHY1 535 aa28.02■■■□□ 2.08
DNMT3A-206ENST00000406659 DACH1Q9UI36 760 aa28.02■■■□□ 2.08
DNMT3A-206ENST00000406659 PNMA6FA0A0J9YX94 578 aa28.01■■■□□ 2.08
DNMT3A-206ENST00000406659 TXLNAP40222 546 aa28.01■■■□□ 2.08
DNMT3A-206ENST00000406659 AFMP43652 599 aa28.01■■■□□ 2.08
DNMT3A-206ENST00000406659 SH3RF1Q7Z6J0 888 aa28.01■■■□□ 2.08
DNMT3A-206ENST00000406659 MLKLQ8NB16 471 aa28.01■■■□□ 2.08
DNMT3A-206ENST00000406659 JMJD4Q9H9V9 463 aa28.01■■■□□ 2.08
DNMT3A-206ENST00000406659 HDAC9Q9UKV0 1011 aa28.01■■■□□ 2.08
DNMT3A-206ENST00000406659 PSMD14O00487 310 aa28.01■■■□□ 2.07
DNMT3A-206ENST00000406659 LAD1O00515 517 aa28.01■■■□□ 2.07
DNMT3A-206ENST00000406659 VIL1P09327 827 aaKnown RBP28.01■■■□□ 2.07
DNMT3A-206ENST00000406659 EEF2P13639 858 aaKnown RBP28.01■■■□□ 2.07
DNMT3A-206ENST00000406659 MORC3Q14149 939 aa28.01■■■□□ 2.07
DNMT3A-206ENST00000406659 REXO1Q8N1G1 1221 aaKnown RBP28.01■■■□□ 2.07
DNMT3A-206ENST00000406659 MKL1Q969V6 931 aa28.01■■■□□ 2.07
DNMT3A-206ENST00000406659 COA7Q96BR5 231 aa28.01■■■□□ 2.07
DNMT3A-206ENST00000406659 VPS33BQ9H267 617 aa28.01■■■□□ 2.07
DNMT3A-206ENST00000406659 BMP6P22004 513 aa28■■■□□ 2.07
DNMT3A-206ENST00000406659 ADCY7P51828 1080 aa28■■■□□ 2.07
DNMT3A-206ENST00000406659 TTBK2Q6IQ55 1244 aa28■■■□□ 2.07
DNMT3A-206ENST00000406659 TMEM179Q6ZVK1 233 aa28■■■□□ 2.07
DNMT3A-206ENST00000406659 SPATA20Q8TB22 786 aa28■■■□□ 2.07
DNMT3A-206ENST00000406659 BIN2Q9UBW5 565 aaPredicted RBP28■■■□□ 2.07
DNMT3A-206ENST00000406659 PSME4Q14997 1843 aa28■■■□□ 2.07
DNMT3A-206ENST00000406659 ATRNL1Q5VV63 1379 aa27.99■■■□□ 2.07
DNMT3A-206ENST00000406659 OFD1O75665 1012 aa27.99■■■□□ 2.07
DNMT3A-206ENST00000406659 KCTD1Q719H9 257 aa27.99■■■□□ 2.07
DNMT3A-206ENST00000406659 ABCB5Q2M3G0 1257 aa27.99■■■□□ 2.07
DNMT3A-206ENST00000406659 JAKMIP3Q5VZ66 844 aa27.99■■■□□ 2.07
DNMT3A-206ENST00000406659 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.99■■■□□ 2.07
DNMT3A-206ENST00000406659 NEK8Q86SG6 692 aa27.99■■■□□ 2.07
DNMT3A-206ENST00000406659 DCAF4Q8WV16 495 aa27.99■■■□□ 2.07
DNMT3A-206ENST00000406659 TMEM60Q9H2L4 133 aa27.99■■■□□ 2.07
DNMT3A-206ENST00000406659 RAD21O60216 631 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms