RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 FBXW10Q5XX13 1052 aa16.9■□□□□ 0.3
ATG4B-206ENST00000405546 STAG2Q8N3U4 1231 aa16.9■□□□□ 0.3
ATG4B-206ENST00000405546 BRIP1Q9BX63 1249 aa16.9■□□□□ 0.3
ATG4B-206ENST00000405546 ZNF804BA4D1E1 1349 aa16.9■□□□□ 0.3
ATG4B-206ENST00000405546 KIF5CO60282 957 aa16.89■□□□□ 0.29
ATG4B-206ENST00000405546 LDHBP07195 334 aaKnown RBP16.89■□□□□ 0.29
ATG4B-206ENST00000405546 IVLP07476 585 aa16.89■□□□□ 0.29
ATG4B-206ENST00000405546 CUL4BQ13620 913 aa16.89■□□□□ 0.29
ATG4B-206ENST00000405546 PPP2R5BQ15173 497 aa16.89■□□□□ 0.29
ATG4B-206ENST00000405546 ZNF579Q8NAF0 562 aaKnown RBP16.89■□□□□ 0.29
ATG4B-206ENST00000405546 PNMA1Q8ND90 353 aa16.89■□□□□ 0.29
ATG4B-206ENST00000405546 FERMT2Q96AC1 680 aa16.89■□□□□ 0.29
ATG4B-206ENST00000405546 TRIM10Q9UDY6 481 aa16.89■□□□□ 0.29
ATG4B-206ENST00000405546 ATP8B1O43520 1251 aa16.89■□□□□ 0.29
ATG4B-206ENST00000405546 CCDC175P0C221 793 aa16.89■□□□□ 0.29
ATG4B-206ENST00000405546 CASP14P31944 242 aa16.89■□□□□ 0.29
ATG4B-206ENST00000405546 UBA7P41226 1012 aa16.89■□□□□ 0.29
ATG4B-206ENST00000405546 HDAC6Q9UBN7 1215 aa16.89■□□□□ 0.29
ATG4B-206ENST00000405546 MAP2K7O14733 419 aa16.88■□□□□ 0.29
ATG4B-206ENST00000405546 ADAMTS3O15072 1205 aa16.88■□□□□ 0.29
ATG4B-206ENST00000405546 SRGAP2O75044 1071 aa16.88■□□□□ 0.29
ATG4B-206ENST00000405546 RNF40O75150 1001 aa16.88■□□□□ 0.29
ATG4B-206ENST00000405546 EIF3JO75822 258 aaKnown RBP16.88■□□□□ 0.29
ATG4B-206ENST00000405546 SPATA1Q5VX52 437 aa16.88■□□□□ 0.29
ATG4B-206ENST00000405546 FAM237AA0A1B0GTK4 181 aa16.88■□□□□ 0.29
ATG4B-206ENST00000405546 PP2D1A8MPX8 630 aa16.88■□□□□ 0.29
ATG4B-206ENST00000405546 CCT5P48643 541 aa16.88■□□□□ 0.29
ATG4B-206ENST00000405546 MNAT1P51948 309 aa16.88■□□□□ 0.29
ATG4B-206ENST00000405546 INF2Q27J81 1249 aa16.88■□□□□ 0.29
ATG4B-206ENST00000405546 CLEC4GQ6UXB4 293 aa16.88■□□□□ 0.29
ATG4B-206ENST00000405546 MED15Q96RN5 788 aa16.88■□□□□ 0.29
ATG4B-206ENST00000405546 RFC4P35249 363 aa16.88■□□□□ 0.29
ATG4B-206ENST00000405546 SF3B3Q15393 1217 aaKnown RBP16.88■□□□□ 0.29
ATG4B-206ENST00000405546 L1RE1Q9UN81 338 aa16.88■□□□□ 0.29
ATG4B-206ENST00000405546 RTCBQ9Y3I0 505 aaKnown RBP16.88■□□□□ 0.29
ATG4B-206ENST00000405546 SAMM50Q9Y512 469 aa16.88■□□□□ 0.29
ATG4B-206ENST00000405546 UBR2Q8IWV8 1755 aa16.87■□□□□ 0.29
ATG4B-206ENST00000405546 ERLIN1O75477 346 aa16.87■□□□□ 0.29
ATG4B-206ENST00000405546 BRD3Q15059 726 aa16.87■□□□□ 0.29
ATG4B-206ENST00000405546 TRIML1Q8N9V2 468 aa16.87■□□□□ 0.29
ATG4B-206ENST00000405546 STX10O60499 249 aa16.87■□□□□ 0.29
ATG4B-206ENST00000405546 BMP15O95972 392 aa16.87■□□□□ 0.29
ATG4B-206ENST00000405546 FAM212AQ96EL1 285 aa16.87■□□□□ 0.29
ATG4B-206ENST00000405546 CCNL1Q9UK58 526 aaPredicted RBP16.87■□□□□ 0.29
ATG4B-206ENST00000405546 GDAQ9Y2T3 454 aa16.87■□□□□ 0.29
ATG4B-206ENST00000405546 TOGARAM1Q9Y4F4 1720 aa16.87■□□□□ 0.29
ATG4B-206ENST00000405546 GUCY2CP25092 1073 aa16.87■□□□□ 0.29
ATG4B-206ENST00000405546 SARSP49591 514 aaKnown RBP16.87■□□□□ 0.29
ATG4B-206ENST00000405546 NYXQ9GZU5 481 aa16.87■□□□□ 0.29
ATG4B-206ENST00000405546 ANAPC4Q9UJX5 808 aa16.87■□□□□ 0.29
ATG4B-206ENST00000405546 ERCC5P28715 1186 aaPredicted RBP16.86■□□□□ 0.29
ATG4B-206ENST00000405546 DTHD1Q6ZMT9 781 aa16.86■□□□□ 0.29
ATG4B-206ENST00000405546 BLIDQ8IZY5 108 aa16.86■□□□□ 0.29
ATG4B-206ENST00000405546 SH3RF3Q8TEJ3 882 aaPredicted RBP16.86■□□□□ 0.29
ATG4B-206ENST00000405546 UIMC1Q96RL1 719 aa16.86■□□□□ 0.29
ATG4B-206ENST00000405546 ANKRD2Q9GZV1 360 aa16.86■□□□□ 0.29
ATG4B-206ENST00000405546 ATP8A2Q9NTI2 1148 aa16.86■□□□□ 0.29
ATG4B-206ENST00000405546 CDC23Q9UJX2 597 aa16.86■□□□□ 0.29
ATG4B-206ENST00000405546 GUCA1BQ9UMX6 200 aa16.86■□□□□ 0.29
ATG4B-206ENST00000405546 DDAH1O94760 285 aa16.86■□□□□ 0.29
ATG4B-206ENST00000405546 ERCC3P19447 782 aa16.86■□□□□ 0.29
ATG4B-206ENST00000405546 KCNJ6P48051 423 aa16.86■□□□□ 0.29
ATG4B-206ENST00000405546 ATP2B2Q01814 1243 aa16.86■□□□□ 0.29
ATG4B-206ENST00000405546 FBXO33Q7Z6M2 555 aa16.86■□□□□ 0.29
ATG4B-206ENST00000405546 SLF1Q9BQI6 1058 aa16.86■□□□□ 0.29
ATG4B-206ENST00000405546 F8W031 263 aaPredicted RBP16.85■□□□□ 0.29
ATG4B-206ENST00000405546 MYCNP04198 464 aaPredicted RBP16.85■□□□□ 0.29
ATG4B-206ENST00000405546 UBXN1Q04323 297 aa16.85■□□□□ 0.29
ATG4B-206ENST00000405546 LETM2Q2VYF4 491 aa16.85■□□□□ 0.29
ATG4B-206ENST00000405546 RASGRP2Q7LDG7 609 aa16.85■□□□□ 0.29
ATG4B-206ENST00000405546 NELFBQ8WX92 580 aa16.85■□□□□ 0.29
ATG4B-206ENST00000405546 CTAGE15A4D2H0 777 aa16.85■□□□□ 0.29
ATG4B-206ENST00000405546 TUBB4AP04350 444 aa16.85■□□□□ 0.29
ATG4B-206ENST00000405546 CTAGE8P0CG41 777 aa16.85■□□□□ 0.29
ATG4B-206ENST00000405546 ZNF18P17022 549 aa16.85■□□□□ 0.29
ATG4B-206ENST00000405546 FUT2Q10981 343 aa16.85■□□□□ 0.29
ATG4B-206ENST00000405546 NR1I3Q14994 352 aa16.85■□□□□ 0.29
ATG4B-206ENST00000405546 TSR1Q2NL82 804 aaKnown RBP16.85■□□□□ 0.29
ATG4B-206ENST00000405546 CTAGE6Q86UF2 777 aa16.85■□□□□ 0.29
ATG4B-206ENST00000405546 CTAGE4Q8IX94 777 aa16.85■□□□□ 0.29
ATG4B-206ENST00000405546 GSDMAQ96QA5 445 aa16.85■□□□□ 0.29
ATG4B-206ENST00000405546 CTAGE9A4FU28 777 aa16.85■□□□□ 0.29
ATG4B-206ENST00000405546 EIF6P56537 245 aaKnown RBP16.85■□□□□ 0.29
ATG4B-206ENST00000405546 ARPP21Q9UBL0 812 aaPredicted RBP16.85■□□□□ 0.29
ATG4B-206ENST00000405546 NUP98P52948 1817 aa16.84■□□□□ 0.29
ATG4B-206ENST00000405546 CNTNAP5Q8WYK1 1306 aa16.84■□□□□ 0.29
ATG4B-206ENST00000405546 BAG3O95817 575 aa16.84■□□□□ 0.29
ATG4B-206ENST00000405546 SPTY2D1Q68D10 685 aaPredicted RBP16.84■□□□□ 0.29
ATG4B-206ENST00000405546 CTAGE1Q96RT6 745 aa16.84■□□□□ 0.29
ATG4B-206ENST00000405546 MTA3Q9BTC8 594 aa16.84■□□□□ 0.29
ATG4B-206ENST00000405546 ADGRG1Q9Y653 693 aa16.84■□□□□ 0.29
ATG4B-206ENST00000405546 TRIM49BA6NDI0 452 aa16.84■□□□□ 0.29
ATG4B-206ENST00000405546 CALML3P27482 149 aa16.84■□□□□ 0.29
ATG4B-206ENST00000405546 PAK1Q13153 545 aa16.84■□□□□ 0.29
ATG4B-206ENST00000405546 PPM1EQ8WY54 764 aa16.84■□□□□ 0.29
ATG4B-206ENST00000405546 NAPAP54920 295 aa16.83■□□□□ 0.29
ATG4B-206ENST00000405546 DPYDQ12882 1025 aa16.83■□□□□ 0.29
ATG4B-206ENST00000405546 NFIXQ14938 502 aa16.83■□□□□ 0.29
ATG4B-206ENST00000405546 PFKFB3Q16875 520 aaPredicted RBP16.83■□□□□ 0.29
ATG4B-206ENST00000405546 AFAP1L1Q8TED9 768 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms