RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 MB21D1Q8N884 522 aa20.09■□□□□ 0.81
PTCHD3P3-201ENST00000403073 NUP133Q8WUM0 1156 aa20.09■□□□□ 0.81
PTCHD3P3-201ENST00000403073 UPF3BQ9BZI7 483 aaKnown RBP20.09■□□□□ 0.81
PTCHD3P3-201ENST00000403073 TM6SF1Q9BZW5 370 aa20.09■□□□□ 0.81
PTCHD3P3-201ENST00000403073 UBA5Q9GZZ9 404 aa20.09■□□□□ 0.81
PTCHD3P3-201ENST00000403073 CPVLQ9H3G5 476 aa20.09■□□□□ 0.81
PTCHD3P3-201ENST00000403073 PRR12Q9ULL5 1215 aa20.09■□□□□ 0.81
PTCHD3P3-201ENST00000403073 ZBED4O75132 1171 aa20.08■□□□□ 0.81
PTCHD3P3-201ENST00000403073 FMNL1O95466 1100 aaPredicted RBP20.08■□□□□ 0.81
PTCHD3P3-201ENST00000403073 FGD1P98174 961 aa20.08■□□□□ 0.81
PTCHD3P3-201ENST00000403073 GPATCH4Q5T3I0 446 aaKnown RBP20.08■□□□□ 0.81
PTCHD3P3-201ENST00000403073 BTNL9Q6UXG8 535 aa20.08■□□□□ 0.81
PTCHD3P3-201ENST00000403073 RAB11FIP4Q86YS3 637 aa20.08■□□□□ 0.81
PTCHD3P3-201ENST00000403073 STAG2Q8N3U4 1231 aa20.08■□□□□ 0.81
PTCHD3P3-201ENST00000403073 REPS2Q8NFH8 660 aa20.08■□□□□ 0.81
PTCHD3P3-201ENST00000403073 TRIM47Q96LD4 638 aa20.08■□□□□ 0.81
PTCHD3P3-201ENST00000403073 BRPF3Q9ULD4 1205 aa20.08■□□□□ 0.81
PTCHD3P3-201ENST00000403073 CYP46A1Q9Y6A2 500 aa20.08■□□□□ 0.81
PTCHD3P3-201ENST00000403073 MYH4Q9Y623 1939 aa20.08■□□□□ 0.8
PTCHD3P3-201ENST00000403073 GRM4Q14833 912 aa20.07■□□□□ 0.8
PTCHD3P3-201ENST00000403073 ASPRV1Q53RT3 343 aa20.07■□□□□ 0.8
PTCHD3P3-201ENST00000403073 SYDE2Q5VT97 1194 aa20.07■□□□□ 0.8
PTCHD3P3-201ENST00000403073 SGMS1Q86VZ5 419 aa20.07■□□□□ 0.8
PTCHD3P3-201ENST00000403073 CPXCR1Q8N123 301 aa20.07■□□□□ 0.8
PTCHD3P3-201ENST00000403073 MOV10L1Q9BXT6 1211 aaKnown RBP20.07■□□□□ 0.8
PTCHD3P3-201ENST00000403073 SPATC1LQ9H0A9 340 aa20.07■□□□□ 0.8
PTCHD3P3-201ENST00000403073 PORCNQ9H237 461 aa20.07■□□□□ 0.8
PTCHD3P3-201ENST00000403073 EFCC1Q9HA90 598 aa20.07■□□□□ 0.8
PTCHD3P3-201ENST00000403073 SLC38A10Q9HBR0 1119 aa20.07■□□□□ 0.8
PTCHD3P3-201ENST00000403073 MAD2L2Q9UI95 211 aa20.07■□□□□ 0.8
PTCHD3P3-201ENST00000403073 CTDP1Q9Y5B0 961 aaPredicted RBP20.07■□□□□ 0.8
PTCHD3P3-201ENST00000403073 SLC12A7Q9Y666 1083 aa20.07■□□□□ 0.8
PTCHD3P3-201ENST00000403073 PALM3A6NDB9 673 aaPredicted RBP20.06■□□□□ 0.8
PTCHD3P3-201ENST00000403073 RXRAP19793 462 aa20.06■□□□□ 0.8
PTCHD3P3-201ENST00000403073 FCGRTP55899 365 aa20.06■□□□□ 0.8
PTCHD3P3-201ENST00000403073 CCNA1P78396 465 aa20.06■□□□□ 0.8
PTCHD3P3-201ENST00000403073 CCAR1Q8IX12 1150 aaKnown RBP20.06■□□□□ 0.8
PTCHD3P3-201ENST00000403073 BRF1Q92994 677 aa20.06■□□□□ 0.8
PTCHD3P3-201ENST00000403073 C22orf23Q9BZE7 217 aa20.06■□□□□ 0.8
PTCHD3P3-201ENST00000403073 RAVER2Q9HCJ3 691 aaKnown RBP20.06■□□□□ 0.8
PTCHD3P3-201ENST00000403073 TRIM17Q9Y577 477 aa20.06■□□□□ 0.8
PTCHD3P3-201ENST00000403073 KLRF2D3W0D1 207 aa20.05■□□□□ 0.8
PTCHD3P3-201ENST00000403073 TNPO2O14787 897 aaKnown RBP20.05■□□□□ 0.8
PTCHD3P3-201ENST00000403073 DDAH1O94760 285 aa20.05■□□□□ 0.8
PTCHD3P3-201ENST00000403073 STAT3P40763 770 aa20.05■□□□□ 0.8
PTCHD3P3-201ENST00000403073 SLC4A3P48751 1232 aa20.05■□□□□ 0.8
PTCHD3P3-201ENST00000403073 APOBRQ0VD83 1088 aa20.05■□□□□ 0.8
PTCHD3P3-201ENST00000403073 COL13A1Q5TAT6 717 aaPredicted RBP20.05■□□□□ 0.8
PTCHD3P3-201ENST00000403073 CCDC174Q6PII3 467 aa20.05■□□□□ 0.8
PTCHD3P3-201ENST00000403073 OTOP1Q7RTM1 612 aa20.05■□□□□ 0.8
PTCHD3P3-201ENST00000403073 CTU1Q7Z7A3 348 aaKnown RBP20.05■□□□□ 0.8
PTCHD3P3-201ENST00000403073 CCDC144CPQ8IYA2 1237 aa20.05■□□□□ 0.8
PTCHD3P3-201ENST00000403073 IL17RAQ96F46 866 aa20.05■□□□□ 0.8
PTCHD3P3-201ENST00000403073 BACH2Q9BYV9 841 aa20.05■□□□□ 0.8
PTCHD3P3-201ENST00000403073 VAT1LQ9HCJ6 419 aa20.05■□□□□ 0.8
PTCHD3P3-201ENST00000403073 ZNF214Q9UL59 606 aaPredicted RBP20.05■□□□□ 0.8
PTCHD3P3-201ENST00000403073 KLF18A0A0U1RQI7 1052 aa20.04■□□□□ 0.8
PTCHD3P3-201ENST00000403073 FDX1P10109 184 aa20.04■□□□□ 0.8
PTCHD3P3-201ENST00000403073 ARHGEF6Q15052 776 aa20.04■□□□□ 0.8
PTCHD3P3-201ENST00000403073 WDR78Q5VTH9 848 aa20.04■□□□□ 0.8
PTCHD3P3-201ENST00000403073 SYNE3Q6ZMZ3 975 aa20.04■□□□□ 0.8
PTCHD3P3-201ENST00000403073 PDRG1Q9NUG6 133 aa20.04■□□□□ 0.8
PTCHD3P3-201ENST00000403073 RIPK3Q9Y572 518 aa20.04■□□□□ 0.8
PTCHD3P3-201ENST00000403073 DHX16O60231 1041 aaKnown RBP20.03■□□□□ 0.8
PTCHD3P3-201ENST00000403073 CALM1P0DP23 149 aa20.03■□□□□ 0.8
PTCHD3P3-201ENST00000403073 CALM2P0DP24 149 aa20.03■□□□□ 0.8
PTCHD3P3-201ENST00000403073 CALM3P0DP25 149 aa20.03■□□□□ 0.8
PTCHD3P3-201ENST00000403073 ERCC3P19447 782 aa20.03■□□□□ 0.8
PTCHD3P3-201ENST00000403073 MAPK4P31152 587 aa20.03■□□□□ 0.8
PTCHD3P3-201ENST00000403073 TOB2Q14106 344 aaPredicted RBP20.03■□□□□ 0.8
PTCHD3P3-201ENST00000403073 SNRNP48Q6IEG0 339 aaKnown RBP20.03■□□□□ 0.8
PTCHD3P3-201ENST00000403073 APOA5Q6Q788 366 aa20.03■□□□□ 0.8
PTCHD3P3-201ENST00000403073 NBPF11Q86T75 865 aa20.03■□□□□ 0.8
PTCHD3P3-201ENST00000403073 NCAPG2Q86XI2 1143 aa20.03■□□□□ 0.8
PTCHD3P3-201ENST00000403073 RIOX2Q8IUF8 465 aa20.03■□□□□ 0.8
PTCHD3P3-201ENST00000403073 ADGRF4Q8IZF3 695 aa20.03■□□□□ 0.8
PTCHD3P3-201ENST00000403073 FBXL16Q8N461 479 aa20.03■□□□□ 0.8
PTCHD3P3-201ENST00000403073 FANCBQ8NB91 859 aa20.03■□□□□ 0.8
PTCHD3P3-201ENST00000403073 CTCFLQ8NI51 663 aaPredicted RBP20.03■□□□□ 0.8
PTCHD3P3-201ENST00000403073 AGBL1Q96MI9 1066 aa20.03■□□□□ 0.8
PTCHD3P3-201ENST00000403073 MAP3K14Q99558 947 aa20.03■□□□□ 0.8
PTCHD3P3-201ENST00000403073 LARP6Q9BRS8 491 aaKnown RBP20.03■□□□□ 0.8
PTCHD3P3-201ENST00000403073 RANBP17Q9H2T7 1088 aaKnown RBP20.03■□□□□ 0.8
PTCHD3P3-201ENST00000403073 NAP1L2Q9ULW6 460 aaPredicted RBP20.03■□□□□ 0.8
PTCHD3P3-201ENST00000403073 ZNF536O15090 1300 aa20.02■□□□□ 0.8
PTCHD3P3-201ENST00000403073 RLFQ13129 1914 aa20.02■□□□□ 0.8
PTCHD3P3-201ENST00000403073 ATP2A1O14983 1001 aa20.02■□□□□ 0.8
PTCHD3P3-201ENST00000403073 SLC35G1Q2M3R5 365 aa20.02■□□□□ 0.8
PTCHD3P3-201ENST00000403073 GPR142Q7Z601 462 aa20.02■□□□□ 0.8
PTCHD3P3-201ENST00000403073 PLEKHH3Q7Z736 793 aa20.02■□□□□ 0.8
PTCHD3P3-201ENST00000403073 MICU3Q86XE3 530 aa20.02■□□□□ 0.8
PTCHD3P3-201ENST00000403073 SHCBP1Q8NEM2 672 aa20.02■□□□□ 0.8
PTCHD3P3-201ENST00000403073 COA7Q96BR5 231 aa20.02■□□□□ 0.8
PTCHD3P3-201ENST00000403073 TEX13BQ9BXU2 312 aa20.02■□□□□ 0.8
PTCHD3P3-201ENST00000403073 AGXT2Q9BYV1 514 aa20.02■□□□□ 0.8
PTCHD3P3-201ENST00000403073 JMJD4Q9H9V9 463 aa20.02■□□□□ 0.8
PTCHD3P3-201ENST00000403073 UPF2Q9HAU5 1272 aaKnown RBP20.02■□□□□ 0.8
PTCHD3P3-201ENST00000403073 CWC22Q9HCG8 908 aaKnown RBP20.02■□□□□ 0.8
PTCHD3P3-201ENST00000403073 GABRQQ9UN88 632 aa20.02■□□□□ 0.8
PTCHD3P3-201ENST00000403073 ZBTB43O43298 467 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms