RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 TMC4Q7Z404 712 aa19.22■□□□□ 0.67
DNMT3A-205ENST00000402667 PROM2Q8N271 834 aa19.22■□□□□ 0.67
DNMT3A-205ENST00000402667 DAGLAQ9Y4D2 1042 aa19.22■□□□□ 0.67
DNMT3A-205ENST00000402667 MYH1P12882 1939 aa19.21■□□□□ 0.67
DNMT3A-205ENST00000402667 A0A1B0GTH6 734 aa19.21■□□□□ 0.67
DNMT3A-205ENST00000402667 RIMBP2O15034 1052 aa19.21■□□□□ 0.67
DNMT3A-205ENST00000402667 APTXQ7Z2E3 356 aaKnown RBP19.21■□□□□ 0.67
DNMT3A-205ENST00000402667 KRT27Q7Z3Y8 459 aa19.21■□□□□ 0.67
DNMT3A-205ENST00000402667 TMEM139Q8IV31 216 aa19.21■□□□□ 0.67
DNMT3A-205ENST00000402667 FAM177A1Q8N128 213 aaPredicted RBP19.21■□□□□ 0.67
DNMT3A-205ENST00000402667 TMEM60Q9H2L4 133 aa19.21■□□□□ 0.67
DNMT3A-205ENST00000402667 SYCP1Q15431 976 aa19.2■□□□□ 0.66
DNMT3A-205ENST00000402667 DTHD1Q6ZMT9 781 aa19.2■□□□□ 0.66
DNMT3A-205ENST00000402667 ZMYND12Q9H0C1 365 aa19.2■□□□□ 0.66
DNMT3A-205ENST00000402667 LTBP1Q14766 1721 aa19.2■□□□□ 0.66
DNMT3A-205ENST00000402667 TXLNAP40222 546 aa19.2■□□□□ 0.66
DNMT3A-205ENST00000402667 NOVP48745 357 aa19.2■□□□□ 0.66
DNMT3A-205ENST00000402667 NCBP1Q09161 790 aaKnown RBP19.2■□□□□ 0.66
DNMT3A-205ENST00000402667 TXNRD1Q16881 649 aa19.2■□□□□ 0.66
DNMT3A-205ENST00000402667 ATP6V0A2Q9Y487 856 aa19.2■□□□□ 0.66
DNMT3A-205ENST00000402667 CCP110O43303 1012 aa19.19■□□□□ 0.66
DNMT3A-205ENST00000402667 KARSQ15046 597 aaKnown RBP19.19■□□□□ 0.66
DNMT3A-205ENST00000402667 CDKAL1Q5VV42 579 aa19.19■□□□□ 0.66
DNMT3A-205ENST00000402667 TC2NQ8N9U0 490 aa19.19■□□□□ 0.66
DNMT3A-205ENST00000402667 COA1Q9GZY4 146 aa19.19■□□□□ 0.66
DNMT3A-205ENST00000402667 LRRC37AA6NMS7 1700 aa19.19■□□□□ 0.66
DNMT3A-205ENST00000402667 NAPAP54920 295 aa19.19■□□□□ 0.66
DNMT3A-205ENST00000402667 ARHGAP6O43182 974 aa19.18■□□□□ 0.66
DNMT3A-205ENST00000402667 SMARCA1P28370 1054 aa19.18■□□□□ 0.66
DNMT3A-205ENST00000402667 STAT6P42226 847 aa19.18■□□□□ 0.66
DNMT3A-205ENST00000402667 ADKP55263 362 aaKnown RBP19.18■□□□□ 0.66
DNMT3A-205ENST00000402667 RRAGBQ5VZM2 374 aa19.18■□□□□ 0.66
DNMT3A-205ENST00000402667 SYT10Q6XYQ8 523 aa19.18■□□□□ 0.66
DNMT3A-205ENST00000402667 HOMER1Q86YM7 354 aa19.18■□□□□ 0.66
DNMT3A-205ENST00000402667 RRP36Q96EU6 259 aaKnown RBP19.18■□□□□ 0.66
DNMT3A-205ENST00000402667 BAG1Q99933 345 aaPredicted RBP19.18■□□□□ 0.66
DNMT3A-205ENST00000402667 TEX33O43247 280 aa19.18■□□□□ 0.66
DNMT3A-205ENST00000402667 TUBB4AP04350 444 aa19.18■□□□□ 0.66
DNMT3A-205ENST00000402667 PICALMQ13492 652 aa19.18■□□□□ 0.66
DNMT3A-205ENST00000402667 NAA30Q147X3 362 aaPredicted RBP19.18■□□□□ 0.66
DNMT3A-205ENST00000402667 FCHSD1Q86WN1 690 aa19.18■□□□□ 0.66
DNMT3A-205ENST00000402667 CCDC12Q8WUD4 166 aaPredicted RBP19.18■□□□□ 0.66
DNMT3A-205ENST00000402667 VAT1LQ9HCJ6 419 aa19.18■□□□□ 0.66
DNMT3A-205ENST00000402667 DISC1Q9NRI5 854 aa19.18■□□□□ 0.66
DNMT3A-205ENST00000402667 CTNND2Q9UQB3 1225 aa19.18■□□□□ 0.66
DNMT3A-205ENST00000402667 SMCO2A6NFE2 343 aa19.17■□□□□ 0.66
DNMT3A-205ENST00000402667 PP2D1A8MPX8 630 aa19.17■□□□□ 0.66
DNMT3A-205ENST00000402667 USP17L5A8MUK1 530 aa19.17■□□□□ 0.66
DNMT3A-205ENST00000402667 F8W031 263 aaPredicted RBP19.17■□□□□ 0.66
DNMT3A-205ENST00000402667 CERS5Q8N5B7 392 aa19.17■□□□□ 0.66
DNMT3A-205ENST00000402667 ADD3Q9UEY8 706 aaKnown RBP19.17■□□□□ 0.66
DNMT3A-205ENST00000402667 SUGT1Q9Y2Z0 365 aa19.17■□□□□ 0.66
DNMT3A-205ENST00000402667 LAD1O00515 517 aa19.17■□□□□ 0.66
DNMT3A-205ENST00000402667 RPN1P04843 607 aaKnown RBP19.17■□□□□ 0.66
DNMT3A-205ENST00000402667 GABPAQ06546 454 aa19.17■□□□□ 0.66
DNMT3A-205ENST00000402667 NAALADL2Q58DX5 795 aa19.17■□□□□ 0.66
DNMT3A-205ENST00000402667 ZNF658Q5TYW1 1059 aaPredicted RBP19.17■□□□□ 0.66
DNMT3A-205ENST00000402667 REXO1L1PQ8IX06 675 aa19.17■□□□□ 0.66
DNMT3A-205ENST00000402667 ZC3H12CQ9C0D7 883 aaKnown RBP19.17■□□□□ 0.66
DNMT3A-205ENST00000402667 C6orf50Q9HD87 102 aa19.17■□□□□ 0.66
DNMT3A-205ENST00000402667 STX10O60499 249 aa19.16■□□□□ 0.66
DNMT3A-205ENST00000402667 SRGNP10124 158 aa19.16■□□□□ 0.66
DNMT3A-205ENST00000402667 KRT25Q7Z3Z0 450 aa19.16■□□□□ 0.66
DNMT3A-205ENST00000402667 CTAGE1Q96RT6 745 aa19.16■□□□□ 0.66
DNMT3A-205ENST00000402667 PIGSQ96S52 555 aa19.16■□□□□ 0.66
DNMT3A-205ENST00000402667 UBA5Q9GZZ9 404 aa19.16■□□□□ 0.66
DNMT3A-205ENST00000402667 RMND1Q9NWS8 449 aa19.16■□□□□ 0.66
DNMT3A-205ENST00000402667 SEC63Q9UGP8 760 aaKnown RBP19.16■□□□□ 0.66
DNMT3A-205ENST00000402667 ZNF215Q9UL58 517 aaPredicted RBP19.16■□□□□ 0.66
DNMT3A-205ENST00000402667 FOCADQ5VW36 1801 aa19.16■□□□□ 0.66
DNMT3A-205ENST00000402667 COBLO75128 1261 aa19.16■□□□□ 0.66
DNMT3A-205ENST00000402667 GNA11P29992 359 aa19.16■□□□□ 0.66
DNMT3A-205ENST00000402667 PRPHP41219 470 aa19.16■□□□□ 0.66
DNMT3A-205ENST00000402667 UBA7P41226 1012 aa19.16■□□□□ 0.66
DNMT3A-205ENST00000402667 PDCL2Q8N4E4 241 aa19.16■□□□□ 0.66
DNMT3A-205ENST00000402667 CCSER1Q9C0I3 900 aa19.16■□□□□ 0.66
DNMT3A-205ENST00000402667 MTMR4Q9NYA4 1195 aa19.16■□□□□ 0.66
DNMT3A-205ENST00000402667 RWDD2AQ9UIY3 292 aa19.16■□□□□ 0.66
DNMT3A-205ENST00000402667 ANKRD31Q8N7Z5 1873 aa19.15■□□□□ 0.66
DNMT3A-205ENST00000402667 PDHBP11177 359 aa19.15■□□□□ 0.66
DNMT3A-205ENST00000402667 PBX1P40424 430 aa19.15■□□□□ 0.66
DNMT3A-205ENST00000402667 ETF1P62495 437 aaKnown RBP19.15■□□□□ 0.66
DNMT3A-205ENST00000402667 NONOQ15233 471 aaKnown RBP eCLIP19.15■□□□□ 0.66
DNMT3A-205ENST00000402667 ARID3AQ99856 593 aa19.15■□□□□ 0.66
DNMT3A-205ENST00000402667 RIOX1Q9H6W3 641 aa19.15■□□□□ 0.66
DNMT3A-205ENST00000402667 DDX4Q9NQI0 724 aaKnown RBP19.15■□□□□ 0.66
DNMT3A-205ENST00000402667 TTF2Q9UNY4 1162 aaKnown RBP19.15■□□□□ 0.66
DNMT3A-205ENST00000402667 BRWD3Q6RI45 1802 aa19.15■□□□□ 0.66
DNMT3A-205ENST00000402667 PLIN4Q96Q06 1357 aa19.15■□□□□ 0.66
DNMT3A-205ENST00000402667 ZSCAN12O43309 604 aa19.14■□□□□ 0.66
DNMT3A-205ENST00000402667 PAK1Q13153 545 aa19.14■□□□□ 0.66
DNMT3A-205ENST00000402667 SOGA3Q5TF21 947 aa19.14■□□□□ 0.66
DNMT3A-205ENST00000402667 TRIM65Q6PJ69 517 aa19.14■□□□□ 0.66
DNMT3A-205ENST00000402667 NLGN1Q8N2Q7 840 aa19.14■□□□□ 0.66
DNMT3A-205ENST00000402667 RASSF8Q8NHQ8 419 aa19.14■□□□□ 0.66
DNMT3A-205ENST00000402667 MXD3Q9BW11 206 aa19.14■□□□□ 0.66
DNMT3A-205ENST00000402667 L2HGDHQ9H9P8 463 aa19.14■□□□□ 0.66
DNMT3A-205ENST00000402667 PPP2R2CQ9Y2T4 447 aa19.14■□□□□ 0.66
DNMT3A-205ENST00000402667 AKR1B1P15121 316 aa19.14■□□□□ 0.65
DNMT3A-205ENST00000402667 NPR1P16066 1061 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms