RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 USP17L4A6NCW7 530 aa15.91■□□□□ 0.14
ATG3-202ENST00000402314 KIF5CO60282 957 aa15.91■□□□□ 0.14
ATG3-202ENST00000402314 STX10O60499 249 aa15.91■□□□□ 0.14
ATG3-202ENST00000402314 ZNF18P17022 549 aa15.91■□□□□ 0.14
ATG3-202ENST00000402314 CCT6AP40227 531 aaKnown RBP15.91■□□□□ 0.14
ATG3-202ENST00000402314 NFIXQ14938 502 aa15.91■□□□□ 0.14
ATG3-202ENST00000402314 LRRC31Q6UY01 552 aa15.91■□□□□ 0.14
ATG3-202ENST00000402314 USP17L1Q7RTZ2 530 aa15.91■□□□□ 0.14
ATG3-202ENST00000402314 NGLY1Q96IV0 654 aa15.91■□□□□ 0.14
ATG3-202ENST00000402314 TRIM10Q9UDY6 481 aa15.91■□□□□ 0.14
ATG3-202ENST00000402314 ZPR1O75312 459 aa15.9■□□□□ 0.14
ATG3-202ENST00000402314 IBSPP21815 317 aaPredicted RBP15.9■□□□□ 0.14
ATG3-202ENST00000402314 IL17AQ16552 155 aa15.9■□□□□ 0.14
ATG3-202ENST00000402314 RCSD1Q6JBY9 416 aa15.9■□□□□ 0.14
ATG3-202ENST00000402314 MICALL1Q8N3F8 863 aa15.9■□□□□ 0.14
ATG3-202ENST00000402314 CAPZA3Q96KX2 299 aa15.9■□□□□ 0.14
ATG3-202ENST00000402314 CRNKL1Q9BZJ0 848 aaKnown RBP15.9■□□□□ 0.14
ATG3-202ENST00000402314 CEP131Q9UPN4 1083 aa15.9■□□□□ 0.14
ATG3-202ENST00000402314 TFAP4Q01664 338 aa15.9■□□□□ 0.14
ATG3-202ENST00000402314 DZIP1Q86YF9 867 aaKnown RBP15.9■□□□□ 0.14
ATG3-202ENST00000402314 EHD4Q9H223 541 aa15.9■□□□□ 0.14
ATG3-202ENST00000402314 EFCC1Q9HA90 598 aa15.9■□□□□ 0.14
ATG3-202ENST00000402314 ANKIB1Q9P2G1 1089 aa15.9■□□□□ 0.14
ATG3-202ENST00000402314 SAP30BPQ9UHR5 308 aaKnown RBP15.9■□□□□ 0.14
ATG3-202ENST00000402314 DNAJC21Q5F1R6 531 aaKnown RBP15.89■□□□□ 0.13
ATG3-202ENST00000402314 NT5DC1Q5TFE4 455 aa15.89■□□□□ 0.13
ATG3-202ENST00000402314 IGSF22Q8N9C0 903 aa15.89■□□□□ 0.13
ATG3-202ENST00000402314 ZNF579Q8NAF0 562 aaKnown RBP15.89■□□□□ 0.13
ATG3-202ENST00000402314 MLKLQ8NB16 471 aa15.89■□□□□ 0.13
ATG3-202ENST00000402314 TNFRSF25Q93038 417 aa15.89■□□□□ 0.13
ATG3-202ENST00000402314 PLIN2Q99541 437 aa15.89■□□□□ 0.13
ATG3-202ENST00000402314 HDAC6Q9UBN7 1215 aa15.89■□□□□ 0.13
ATG3-202ENST00000402314 FAM205AQ6ZU69 1335 aa15.89■□□□□ 0.13
ATG3-202ENST00000402314 CASP14P31944 242 aa15.89■□□□□ 0.13
ATG3-202ENST00000402314 BRD3Q15059 726 aa15.89■□□□□ 0.13
ATG3-202ENST00000402314 TYW1BQ6NUM6 668 aa15.89■□□□□ 0.13
ATG3-202ENST00000402314 GPIHBP1Q8IV16 184 aa15.89■□□□□ 0.13
ATG3-202ENST00000402314 ARHGEF1Q92888 912 aaKnown RBP15.89■□□□□ 0.13
ATG3-202ENST00000402314 L1RE1Q9UN81 338 aa15.89■□□□□ 0.13
ATG3-202ENST00000402314 PLCH1Q4KWH8 1693 aa15.89■□□□□ 0.13
ATG3-202ENST00000402314 SRGAP2O75044 1071 aa15.89■□□□□ 0.13
ATG3-202ENST00000402314 GOLGA8HP0CJ92 632 aa15.89■□□□□ 0.13
ATG3-202ENST00000402314 PPFIBP1Q86W92 1011 aa15.89■□□□□ 0.13
ATG3-202ENST00000402314 ENOX1Q8TC92 643 aaKnown RBP15.89■□□□□ 0.13
ATG3-202ENST00000402314 SH3RF3Q8TEJ3 882 aaPredicted RBP15.89■□□□□ 0.13
ATG3-202ENST00000402314 IL17RBQ9NRM6 502 aa15.89■□□□□ 0.13
ATG3-202ENST00000402314 NARFQ9UHQ1 456 aa15.89■□□□□ 0.13
ATG3-202ENST00000402314 CDC23Q9UJX2 597 aa15.89■□□□□ 0.13
ATG3-202ENST00000402314 ADGRG1Q9Y653 693 aa15.89■□□□□ 0.13
ATG3-202ENST00000402314 DUOX1Q9NRD9 1551 aa15.88■□□□□ 0.13
ATG3-202ENST00000402314 MYH6P13533 1939 aa15.88■□□□□ 0.13
ATG3-202ENST00000402314 AKR1B15C9JRZ8 316 aaPredicted RBP15.88■□□□□ 0.13
ATG3-202ENST00000402314 SCG2P13521 617 aa15.88■□□□□ 0.13
ATG3-202ENST00000402314 TM4SF1P30408 202 aa15.88■□□□□ 0.13
ATG3-202ENST00000402314 LIG3P49916 1009 aa15.88■□□□□ 0.13
ATG3-202ENST00000402314 BARGINQ6ZT62 677 aa15.88■□□□□ 0.13
ATG3-202ENST00000402314 MTA3Q9BTC8 594 aa15.88■□□□□ 0.13
ATG3-202ENST00000402314 PP2D1A8MPX8 630 aa15.88■□□□□ 0.13
ATG3-202ENST00000402314 PLCD1P51178 756 aa15.88■□□□□ 0.13
ATG3-202ENST00000402314 TBX2Q13207 712 aaPredicted RBP15.88■□□□□ 0.13
ATG3-202ENST00000402314 SLC10A5Q5PT55 438 aa15.88■□□□□ 0.13
ATG3-202ENST00000402314 MTRQ99707 1265 aa15.88■□□□□ 0.13
ATG3-202ENST00000402314 SLF1Q9BQI6 1058 aa15.88■□□□□ 0.13
ATG3-202ENST00000402314 PES1O00541 588 aaKnown RBP15.87■□□□□ 0.13
ATG3-202ENST00000402314 EIF3JO75822 258 aaKnown RBP15.87■□□□□ 0.13
ATG3-202ENST00000402314 FGRP09769 529 aa15.87■□□□□ 0.13
ATG3-202ENST00000402314 USP5P45974 858 aa15.87■□□□□ 0.13
ATG3-202ENST00000402314 RCAN1P53805 252 aa15.87■□□□□ 0.13
ATG3-202ENST00000402314 SLC35G1Q2M3R5 365 aa15.87■□□□□ 0.13
ATG3-202ENST00000402314 RBM28Q9NW13 759 aaKnown RBP15.87■□□□□ 0.13
ATG3-202ENST00000402314 CCNL1Q9UK58 526 aaPredicted RBP15.87■□□□□ 0.13
ATG3-202ENST00000402314 XDHP47989 1333 aa15.87■□□□□ 0.13
ATG3-202ENST00000402314 RNF40O75150 1001 aa15.87■□□□□ 0.13
ATG3-202ENST00000402314 ERLIN1O75477 346 aa15.87■□□□□ 0.13
ATG3-202ENST00000402314 CUL4BQ13620 913 aa15.87■□□□□ 0.13
ATG3-202ENST00000402314 TPTE2Q6XPS3 522 aa15.87■□□□□ 0.13
ATG3-202ENST00000402314 SPATA20Q8TB22 786 aa15.87■□□□□ 0.13
ATG3-202ENST00000402314 TGFBRAP1Q8WUH2 860 aa15.87■□□□□ 0.13
ATG3-202ENST00000402314 EEF2KMTQ96G04 330 aa15.87■□□□□ 0.13
ATG3-202ENST00000402314 BRMS1Q9HCU9 246 aa15.87■□□□□ 0.13
ATG3-202ENST00000402314 GUCA1BQ9UMX6 200 aa15.87■□□□□ 0.13
ATG3-202ENST00000402314 CTAGE9A4FU28 777 aa15.86■□□□□ 0.13
ATG3-202ENST00000402314 MAPKAPK5Q8IW41 473 aa15.86■□□□□ 0.13
ATG3-202ENST00000402314 STX8Q9UNK0 236 aa15.86■□□□□ 0.13
ATG3-202ENST00000402314 CTNND2Q9UQB3 1225 aa15.86■□□□□ 0.13
ATG3-202ENST00000402314 CTAGE15A4D2H0 777 aa15.86■□□□□ 0.13
ATG3-202ENST00000402314 IVLP07476 585 aa15.86■□□□□ 0.13
ATG3-202ENST00000402314 CTAGE8P0CG41 777 aa15.86■□□□□ 0.13
ATG3-202ENST00000402314 CTAGE6Q86UF2 777 aa15.86■□□□□ 0.13
ATG3-202ENST00000402314 CTAGE4Q8IX94 777 aa15.86■□□□□ 0.13
ATG3-202ENST00000402314 GOLGA6L9A6NEM1 432 aa15.86■□□□□ 0.13
ATG3-202ENST00000402314 RNF225M0QZC1 329 aaPredicted RBP15.86■□□□□ 0.13
ATG3-202ENST00000402314 ORC4O43929 436 aa15.86■□□□□ 0.13
ATG3-202ENST00000402314 RPS6KA4O75676 772 aa15.86■□□□□ 0.13
ATG3-202ENST00000402314 DDAH1O94760 285 aa15.86■□□□□ 0.13
ATG3-202ENST00000402314 MAGEA9P43362 315 aa15.86■□□□□ 0.13
ATG3-202ENST00000402314 FXR1P51114 621 aaKnown RBP eCLIP15.86■□□□□ 0.13
ATG3-202ENST00000402314 APTXQ7Z2E3 356 aaKnown RBP15.86■□□□□ 0.13
ATG3-202ENST00000402314 FCHSD1Q86WN1 690 aa15.86■□□□□ 0.13
ATG3-202ENST00000402314 SYNRGQ9UMZ2 1314 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms