RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 MIGA2Q7L4E1 593 aa29.39■■■□□ 2.3
CPNE1-205ENST00000401607 FMR1NBQ8N0W7 255 aaPredicted RBP29.39■■■□□ 2.3
CPNE1-205ENST00000401607 GMCL1P1Q8NEA9 526 aa29.39■■■□□ 2.3
CPNE1-205ENST00000401607 JMJD4Q9H9V9 463 aa29.39■■■□□ 2.3
CPNE1-205ENST00000401607 NOL7Q9UMY1 257 aaKnown RBP29.39■■■□□ 2.3
CPNE1-205ENST00000401607 CMA1P23946 247 aa29.39■■■□□ 2.29
CPNE1-205ENST00000401607 MAP3K11Q16584 847 aa29.39■■■□□ 2.29
CPNE1-205ENST00000401607 KIF4BQ2VIQ3 1234 aa29.39■■■□□ 2.29
CPNE1-205ENST00000401607 PIK3AP1Q6ZUJ8 805 aa29.39■■■□□ 2.29
CPNE1-205ENST00000401607 ADGRF4Q8IZF3 695 aa29.39■■■□□ 2.29
CPNE1-205ENST00000401607 TEPSINQ96N21 525 aa29.39■■■□□ 2.29
CPNE1-205ENST00000401607 ZMYND12Q9H0C1 365 aa29.39■■■□□ 2.29
CPNE1-205ENST00000401607 ZBTB21Q9ULJ3 1066 aa29.39■■■□□ 2.29
CPNE1-205ENST00000401607 SBF1O95248 1867 aa29.38■■■□□ 2.29
CPNE1-205ENST00000401607 TRIM75PA6NK02 468 aa29.38■■■□□ 2.29
CPNE1-205ENST00000401607 NDUFA8P51970 172 aa29.38■■■□□ 2.29
CPNE1-205ENST00000401607 NAPAP54920 295 aa29.38■■■□□ 2.29
CPNE1-205ENST00000401607 A0A1W2PRG0 241 aa29.37■■■□□ 2.29
CPNE1-205ENST00000401607 F5H6K3 240 aa29.37■■■□□ 2.29
CPNE1-205ENST00000401607 CUTAO60888 179 aa29.37■■■□□ 2.29
CPNE1-205ENST00000401607 SLC16A2P36021 539 aa29.37■■■□□ 2.29
CPNE1-205ENST00000401607 KLRC3Q07444 240 aa29.37■■■□□ 2.29
CPNE1-205ENST00000401607 TNFAIP1Q13829 316 aa29.37■■■□□ 2.29
CPNE1-205ENST00000401607 SHC4Q6S5L8 630 aa29.37■■■□□ 2.29
CPNE1-205ENST00000401607 RASGRP4Q8TDF6 673 aa29.37■■■□□ 2.29
CPNE1-205ENST00000401607 CCDC12Q8WUD4 166 aaPredicted RBP29.37■■■□□ 2.29
CPNE1-205ENST00000401607 CLIC6Q96NY7 704 aa29.37■■■□□ 2.29
CPNE1-205ENST00000401607 SYT17Q9BSW7 474 aa29.37■■■□□ 2.29
CPNE1-205ENST00000401607 FBXO2Q9UK22 296 aaPredicted RBP29.37■■■□□ 2.29
CPNE1-205ENST00000401607 CEP131Q9UPN4 1083 aa29.37■■■□□ 2.29
CPNE1-205ENST00000401607 MORC2Q9Y6X9 1032 aaPredicted RBP29.37■■■□□ 2.29
CPNE1-205ENST00000401607 hCG_1984214I3L0E3 225 aa29.36■■■□□ 2.29
CPNE1-205ENST00000401607 SLC1A4P43007 532 aa29.36■■■□□ 2.29
CPNE1-205ENST00000401607 ZNF713Q8N859 430 aaPredicted RBP29.36■■■□□ 2.29
CPNE1-205ENST00000401607 MTMR8Q96EF0 704 aa29.36■■■□□ 2.29
CPNE1-205ENST00000401607 PANK2Q9BZ23 570 aa29.36■■■□□ 2.29
CPNE1-205ENST00000401607 HACL1Q9UJ83 578 aa29.36■■■□□ 2.29
CPNE1-205ENST00000401607 PCDHA6Q9UN73 950 aa29.36■■■□□ 2.29
CPNE1-205ENST00000401607 PCDHA8Q9Y5H6 950 aa29.36■■■□□ 2.29
CPNE1-205ENST00000401607 NDUFB10O96000 172 aa29.36■■■□□ 2.29
CPNE1-205ENST00000401607 KRI1Q8N9T8 703 aaKnown RBP29.36■■■□□ 2.29
CPNE1-205ENST00000401607 GMCL1Q96IK5 515 aa29.36■■■□□ 2.29
CPNE1-205ENST00000401607 SYNPO2Q9UMS6 1093 aa29.36■■■□□ 2.29
CPNE1-205ENST00000401607 RAD21O60216 631 aa29.35■■■□□ 2.29
CPNE1-205ENST00000401607 PFKFB1P16118 471 aa29.35■■■□□ 2.29
CPNE1-205ENST00000401607 PTPREP23469 700 aa29.35■■■□□ 2.29
CPNE1-205ENST00000401607 TRAPPC10P48553 1259 aa29.35■■■□□ 2.29
CPNE1-205ENST00000401607 TTC38Q5R3I4 469 aa29.35■■■□□ 2.29
CPNE1-205ENST00000401607 PNMA6FA0A0J9YX94 578 aa29.34■■■□□ 2.29
CPNE1-205ENST00000401607 FAM237AA0A1B0GTK4 181 aa29.34■■■□□ 2.29
CPNE1-205ENST00000401607 ESYT2A0FGR8 921 aa29.34■■■□□ 2.29
CPNE1-205ENST00000401607 KINO60870 393 aaKnown RBP29.34■■■□□ 2.29
CPNE1-205ENST00000401607 CKAP2LQ8IYA6 745 aa29.34■■■□□ 2.29
CPNE1-205ENST00000401607 HPSEQ9Y251 543 aa29.34■■■□□ 2.29
CPNE1-205ENST00000401607 MRVI1Q9Y6F6 885 aa29.34■■■□□ 2.29
CPNE1-205ENST00000401607 SMCO2A6NFE2 343 aa29.34■■■□□ 2.29
CPNE1-205ENST00000401607 USP17L10C9JJH3 530 aa29.34■■■□□ 2.29
CPNE1-205ENST00000401607 CAP2P40123 477 aa29.34■■■□□ 2.29
CPNE1-205ENST00000401607 RESP18Q5W5W9 173 aa29.34■■■□□ 2.29
CPNE1-205ENST00000401607 GPC2Q8N158 579 aa29.34■■■□□ 2.29
CPNE1-205ENST00000401607 H7C1D1 291 aa29.33■■■□□ 2.29
CPNE1-205ENST00000401607 PPP1R11O60927 126 aaPredicted RBP29.33■■■□□ 2.29
CPNE1-205ENST00000401607 ECE1P42892 770 aa29.33■■■□□ 2.29
CPNE1-205ENST00000401607 GRIN1Q05586 938 aa29.33■■■□□ 2.29
CPNE1-205ENST00000401607 COA7Q96BR5 231 aa29.33■■■□□ 2.29
CPNE1-205ENST00000401607 C6orf50Q9HD87 102 aa29.33■■■□□ 2.29
CPNE1-205ENST00000401607 GPRC5DQ9NZD1 345 aa29.33■■■□□ 2.29
CPNE1-205ENST00000401607 ZNF174Q15697 407 aa29.32■■■□□ 2.28
CPNE1-205ENST00000401607 ACER1Q8TDN7 264 aa29.32■■■□□ 2.28
CPNE1-205ENST00000401607 NUP88Q99567 741 aaPredicted RBP29.32■■■□□ 2.28
CPNE1-205ENST00000401607 ARHGEF10LQ9HCE6 1279 aa29.32■■■□□ 2.28
CPNE1-205ENST00000401607 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.32■■■□□ 2.28
CPNE1-205ENST00000401607 SRPRBQ9Y5M8 271 aaKnown RBP29.32■■■□□ 2.28
CPNE1-205ENST00000401607 GNA11P29992 359 aa29.31■■■□□ 2.28
CPNE1-205ENST00000401607 TRPM4Q8TD43 1214 aa29.31■■■□□ 2.28
CPNE1-205ENST00000401607 TMX2Q9Y320 296 aa29.31■■■□□ 2.28
CPNE1-205ENST00000401607 CCDC194A0A1B0GVG4 234 aa29.31■■■□□ 2.28
CPNE1-205ENST00000401607 PHF20L1A8MW92 1017 aa29.31■■■□□ 2.28
CPNE1-205ENST00000401607 ZBTB5O15062 677 aa29.31■■■□□ 2.28
CPNE1-205ENST00000401607 CTAGE5O15320 804 aa29.31■■■□□ 2.28
CPNE1-205ENST00000401607 BMP15O95972 392 aa29.31■■■□□ 2.28
CPNE1-205ENST00000401607 YBX3P16989 372 aaKnown RBP eCLIP29.3■■■□□ 2.282e-6■■■■□ 21.8
CPNE1-205ENST00000401607 DEFB129Q9H1M3 183 aa29.3■■■□□ 2.28
CPNE1-205ENST00000401607 ZNF202O95125 648 aa29.29■■■□□ 2.28
CPNE1-205ENST00000401607 PPP1R18Q6NYC8 613 aa29.29■■■□□ 2.28
CPNE1-205ENST00000401607 ZNF579Q8NAF0 562 aaKnown RBP29.29■■■□□ 2.28
CPNE1-205ENST00000401607 RNF214Q8ND24 703 aa29.29■■■□□ 2.28
CPNE1-205ENST00000401607 ATAD5Q96QE3 1844 aa29.29■■■□□ 2.28
CPNE1-205ENST00000401607 CCDC192P0DO97 292 aa29.29■■■□□ 2.28
CPNE1-205ENST00000401607 BMP3P12645 472 aa29.29■■■□□ 2.28
CPNE1-205ENST00000401607 ATP2C1P98194 919 aaPredicted RBP29.29■■■□□ 2.28
CPNE1-205ENST00000401607 KIAA1755Q5JYT7 1200 aa29.29■■■□□ 2.28
CPNE1-205ENST00000401607 TYRO3Q06418 890 aa29.28■■■□□ 2.28
CPNE1-205ENST00000401607 QRICH1Q2TAL8 776 aa29.27■■■□□ 2.28
CPNE1-205ENST00000401607 SPECC1Q5M775 1068 aa29.27■■■□□ 2.28
CPNE1-205ENST00000401607 ANGEL2Q5VTE6 544 aaKnown RBP29.27■■■□□ 2.28
CPNE1-205ENST00000401607 KRT25Q7Z3Z0 450 aa29.27■■■□□ 2.28
CPNE1-205ENST00000401607 ASNSP08243 561 aa29.26■■■□□ 2.28
CPNE1-205ENST00000401607 SYKP43405 635 aa29.26■■■□□ 2.28
CPNE1-205ENST00000401607 PTGDRQ13258 359 aa29.26■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms