RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 SHANK3Q9BYB0 1731 aa11.9□□□□□ -0.5
PPP4R1-203ENST00000400556 USP17L3A6NCW0 530 aa11.9□□□□□ -0.5
PPP4R1-203ENST00000400556 USP17L4A6NCW7 530 aa11.9□□□□□ -0.5
PPP4R1-203ENST00000400556 NTSR2O95665 410 aa11.9□□□□□ -0.5
PPP4R1-203ENST00000400556 CASP8Q14790 479 aa11.9□□□□□ -0.5
PPP4R1-203ENST00000400556 CCDC122Q5T0U0 273 aa11.9□□□□□ -0.5
PPP4R1-203ENST00000400556 CYP26C1Q6V0L0 522 aa11.9□□□□□ -0.5
PPP4R1-203ENST00000400556 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.9□□□□□ -0.5
PPP4R1-203ENST00000400556 USP17L1Q7RTZ2 530 aa11.9□□□□□ -0.5
PPP4R1-203ENST00000400556 HEATR3Q7Z4Q2 680 aa11.9□□□□□ -0.5
PPP4R1-203ENST00000400556 ANKRD18AQ8IVF6 992 aa11.9□□□□□ -0.5
PPP4R1-203ENST00000400556 FAM84BQ96KN1 310 aaPredicted RBP11.9□□□□□ -0.5
PPP4R1-203ENST00000400556 MMS19Q96T76 1030 aa11.9□□□□□ -0.5
PPP4R1-203ENST00000400556 CAMTA2O94983 1202 aa11.9□□□□□ -0.51
PPP4R1-203ENST00000400556 NDUFA10O95299 355 aa11.9□□□□□ -0.51
PPP4R1-203ENST00000400556 KCTD19Q17RG1 926 aaPredicted RBP11.9□□□□□ -0.51
PPP4R1-203ENST00000400556 CAVIN4Q5BKX8 364 aa11.9□□□□□ -0.51
PPP4R1-203ENST00000400556 TMTC1Q8IUR5 882 aa11.9□□□□□ -0.51
PPP4R1-203ENST00000400556 LRRC15Q8TF66 581 aa11.9□□□□□ -0.51
PPP4R1-203ENST00000400556 GNL3LQ9NVN8 582 aaKnown RBP11.9□□□□□ -0.51
PPP4R1-203ENST00000400556 TTF2Q9UNY4 1162 aaKnown RBP11.9□□□□□ -0.51
PPP4R1-203ENST00000400556 MYH13Q9UKX3 1938 aa11.89□□□□□ -0.51
PPP4R1-203ENST00000400556 RCCD1A6NED2 376 aa11.89□□□□□ -0.51
PPP4R1-203ENST00000400556 KCNQ2O43526 872 aa11.89□□□□□ -0.51
PPP4R1-203ENST00000400556 BRD3Q15059 726 aa11.89□□□□□ -0.51
PPP4R1-203ENST00000400556 CCDC178Q5BJE1 867 aa11.89□□□□□ -0.51
PPP4R1-203ENST00000400556 TXNRD3Q86VQ6 643 aa11.89□□□□□ -0.51
PPP4R1-203ENST00000400556 TXLNBQ8N3L3 684 aa11.89□□□□□ -0.51
PPP4R1-203ENST00000400556 ANKRD20A12PQ8NF67 263 aa11.89□□□□□ -0.51
PPP4R1-203ENST00000400556 NAA15Q9BXJ9 866 aaKnown RBP11.89□□□□□ -0.51
PPP4R1-203ENST00000400556 TRIM34Q9BYJ4 488 aa11.89□□□□□ -0.51
PPP4R1-203ENST00000400556 VAT1LQ9HCJ6 419 aa11.89□□□□□ -0.51
PPP4R1-203ENST00000400556 STX8Q9UNK0 236 aa11.89□□□□□ -0.51
PPP4R1-203ENST00000400556 MAP2K7O14733 419 aa11.89□□□□□ -0.51
PPP4R1-203ENST00000400556 MATR3P43243 847 aaKnown RBP eCLIP11.89□□□□□ -0.515e-7■■■■□ 25.2
PPP4R1-203ENST00000400556 ATP2B2Q01814 1243 aa11.89□□□□□ -0.51
PPP4R1-203ENST00000400556 HDXQ7Z353 690 aa11.89□□□□□ -0.51
PPP4R1-203ENST00000400556 KRT26Q7Z3Y9 468 aa11.89□□□□□ -0.51
PPP4R1-203ENST00000400556 KIAA1328Q86T90 577 aa11.89□□□□□ -0.51
PPP4R1-203ENST00000400556 LACRTQ9GZZ8 138 aa11.89□□□□□ -0.51
PPP4R1-203ENST00000400556 DCP1AQ9NPI6 582 aaPredicted RBP11.89□□□□□ -0.51
PPP4R1-203ENST00000400556 L1RE1Q9UN81 338 aa11.89□□□□□ -0.51
PPP4R1-203ENST00000400556 PLEKHG2Q9H7P9 1386 aa11.89□□□□□ -0.51
PPP4R1-203ENST00000400556 GTPBP6O43824 516 aaPredicted RBP11.89□□□□□ -0.51
PPP4R1-203ENST00000400556 DNA2P51530 1060 aa11.89□□□□□ -0.51
PPP4R1-203ENST00000400556 PPARDQ03181 441 aa11.89□□□□□ -0.51
PPP4R1-203ENST00000400556 GPR101Q96P66 508 aaPredicted RBP11.89□□□□□ -0.51
PPP4R1-203ENST00000400556 RWDD2AQ9UIY3 292 aa11.89□□□□□ -0.51
PPP4R1-203ENST00000400556 LUC7L2Q9Y383 392 aaKnown RBP11.89□□□□□ -0.51
PPP4R1-203ENST00000400556 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.88□□□□□ -0.51
PPP4R1-203ENST00000400556 PAPPAQ13219 1627 aa11.88□□□□□ -0.51
PPP4R1-203ENST00000400556 LOC102724428A0A0B4J2F2 783 aa11.88□□□□□ -0.51
PPP4R1-203ENST00000400556 SIK1P57059 783 aa11.88□□□□□ -0.51
PPP4R1-203ENST00000400556 TFAP4Q01664 338 aa11.88□□□□□ -0.51
PPP4R1-203ENST00000400556 ZNF658Q5TYW1 1059 aaPredicted RBP11.88□□□□□ -0.51
PPP4R1-203ENST00000400556 SMARCAL1Q9NZC9 954 aa11.88□□□□□ -0.51
PPP4R1-203ENST00000400556 LIMA1Q9UHB6 759 aaKnown RBP11.88□□□□□ -0.51
PPP4R1-203ENST00000400556 PLEKP08567 350 aaPredicted RBP11.88□□□□□ -0.51
PPP4R1-203ENST00000400556 TRIM21P19474 475 aaKnown RBP11.88□□□□□ -0.51
PPP4R1-203ENST00000400556 UBA7P41226 1012 aa11.88□□□□□ -0.51
PPP4R1-203ENST00000400556 AK7Q96M32 723 aa11.88□□□□□ -0.51
PPP4R1-203ENST00000400556 MINPP1Q9UNW1 487 aa11.88□□□□□ -0.51
PPP4R1-203ENST00000400556 CCDC194A0A1B0GVG4 234 aa11.88□□□□□ -0.51
PPP4R1-203ENST00000400556 FCER1AP12319 257 aa11.88□□□□□ -0.51
PPP4R1-203ENST00000400556 HERVK_113P62684 666 aa11.88□□□□□ -0.51
PPP4R1-203ENST00000400556 NAALADL2Q58DX5 795 aa11.88□□□□□ -0.51
PPP4R1-203ENST00000400556 CAGE1Q8TC20 777 aa11.88□□□□□ -0.51
PPP4R1-203ENST00000400556 RBM28Q9NW13 759 aaKnown RBP11.88□□□□□ -0.51
PPP4R1-203ENST00000400556 SAP30BPQ9UHR5 308 aaKnown RBP11.88□□□□□ -0.51
PPP4R1-203ENST00000400556 NID2Q14112 1375 aa11.87□□□□□ -0.51
PPP4R1-203ENST00000400556 ATP8B1O43520 1251 aa11.87□□□□□ -0.51
PPP4R1-203ENST00000400556 ERLIN1O75477 346 aa11.87□□□□□ -0.51
PPP4R1-203ENST00000400556 WDR59Q6PJI9 974 aa11.87□□□□□ -0.51
PPP4R1-203ENST00000400556 BLIDQ8IZY5 108 aa11.87□□□□□ -0.51
PPP4R1-203ENST00000400556 POLD4Q9HCU8 107 aa11.87□□□□□ -0.51
PPP4R1-203ENST00000400556 DIXDC1Q155Q3 683 aa11.87□□□□□ -0.51
PPP4R1-203ENST00000400556 RCSD1Q6JBY9 416 aa11.87□□□□□ -0.51
PPP4R1-203ENST00000400556 ANKRD13CQ8N6S4 541 aa11.87□□□□□ -0.51
PPP4R1-203ENST00000400556 MB21D1Q8N884 522 aa11.87□□□□□ -0.51
PPP4R1-203ENST00000400556 NSUN4Q96CB9 384 aaKnown RBP11.87□□□□□ -0.51
PPP4R1-203ENST00000400556 KAT14Q9H8E8 782 aa11.87□□□□□ -0.51
PPP4R1-203ENST00000400556 JADE2Q9NQC1 790 aa11.87□□□□□ -0.51
PPP4R1-203ENST00000400556 EHD2Q9NZN4 543 aa11.87□□□□□ -0.51
PPP4R1-203ENST00000400556 ITGB4P16144 1822 aa11.87□□□□□ -0.51
PPP4R1-203ENST00000400556 MYBL2P10244 700 aa11.87□□□□□ -0.51
PPP4R1-203ENST00000400556 CXCR5P32302 372 aa11.87□□□□□ -0.51
PPP4R1-203ENST00000400556 PFKFB3Q16875 520 aaPredicted RBP11.87□□□□□ -0.51
PPP4R1-203ENST00000400556 LETM2Q2VYF4 491 aa11.87□□□□□ -0.51
PPP4R1-203ENST00000400556 HSP90B2PQ58FF3 399 aa11.87□□□□□ -0.51
PPP4R1-203ENST00000400556 DTHD1Q6ZMT9 781 aa11.87□□□□□ -0.51
PPP4R1-203ENST00000400556 OR8K1Q8NGG5 319 aa11.87□□□□□ -0.51
PPP4R1-203ENST00000400556 DISC1Q9NRI5 854 aa11.87□□□□□ -0.51
PPP4R1-203ENST00000400556 ANAPC4Q9UJX5 808 aa11.87□□□□□ -0.51
PPP4R1-203ENST00000400556 C2orf54Q08AI8 447 aa11.86□□□□□ -0.51
PPP4R1-203ENST00000400556 TSR1Q2NL82 804 aaKnown RBP11.86□□□□□ -0.51
PPP4R1-203ENST00000400556 CSGALNACT2Q8N6G5 542 aa11.86□□□□□ -0.51
PPP4R1-203ENST00000400556 MSANTD4Q8NCY6 345 aa11.86□□□□□ -0.51
PPP4R1-203ENST00000400556 PNMA1Q8ND90 353 aa11.86□□□□□ -0.51
PPP4R1-203ENST00000400556 CICQ96RK0 1608 aaPredicted RBP11.86□□□□□ -0.51
PPP4R1-203ENST00000400556 DCCP43146 1447 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms