RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 IRX5P78411 483 aaPredicted RBP14.3□□□□□ -0.12
LINC00544-201ENST00000400540 C20orf194Q5TEA3 1177 aa14.3□□□□□ -0.12
LINC00544-201ENST00000400540 TSHZ3Q63HK5 1081 aa14.3□□□□□ -0.12
LINC00544-201ENST00000400540 SNRNP48Q6IEG0 339 aaKnown RBP14.3□□□□□ -0.12
LINC00544-201ENST00000400540 RNF180Q86T96 592 aa14.3□□□□□ -0.12
LINC00544-201ENST00000400540 STRBPQ96SI9 672 aaKnown RBP14.3□□□□□ -0.12
LINC00544-201ENST00000400540 SLF1Q9BQI6 1058 aa14.3□□□□□ -0.12
LINC00544-201ENST00000400540 DIS3Q9Y2L1 958 aaKnown RBP14.3□□□□□ -0.12
LINC00544-201ENST00000400540 MYADML2A6NDP7 307 aa14.29□□□□□ -0.12
LINC00544-201ENST00000400540 GSG1L2A8MUP6 293 aa14.29□□□□□ -0.12
LINC00544-201ENST00000400540 MINDY4BA8MYZ0 360 aa14.29□□□□□ -0.12
LINC00544-201ENST00000400540 ADCY6O43306 1168 aa14.29□□□□□ -0.12
LINC00544-201ENST00000400540 NDUFB10O96000 172 aa14.29□□□□□ -0.12
LINC00544-201ENST00000400540 SLC4A3P48751 1232 aa14.29□□□□□ -0.12
LINC00544-201ENST00000400540 SMAD3P84022 425 aaKnown RBP14.29□□□□□ -0.12
LINC00544-201ENST00000400540 ZSCAN25Q6NSZ9 544 aa14.29□□□□□ -0.12
LINC00544-201ENST00000400540 LRRCC1Q9C099 1032 aa14.29□□□□□ -0.12
LINC00544-201ENST00000400540 EPB41L4AQ9HCS5 686 aaPredicted RBP14.29□□□□□ -0.12
LINC00544-201ENST00000400540 TACC3Q9Y6A5 838 aa14.29□□□□□ -0.12
LINC00544-201ENST00000400540 F5H6K3 240 aa14.28□□□□□ -0.12
LINC00544-201ENST00000400540 KIAA0355O15063 1070 aa14.28□□□□□ -0.12
LINC00544-201ENST00000400540 SNAI1O95863 264 aaPredicted RBP14.28□□□□□ -0.12
LINC00544-201ENST00000400540 COPB2P35606 906 aa14.28□□□□□ -0.12
LINC00544-201ENST00000400540 ACLYP53396 1101 aa14.28□□□□□ -0.12
LINC00544-201ENST00000400540 KLRC3Q07444 240 aa14.28□□□□□ -0.12
LINC00544-201ENST00000400540 SBK1Q52WX2 424 aa14.28□□□□□ -0.12
LINC00544-201ENST00000400540 MAFAQ8NHW3 353 aaPredicted RBP14.28□□□□□ -0.12
LINC00544-201ENST00000400540 OSBP2Q969R2 916 aa14.28□□□□□ -0.12
LINC00544-201ENST00000400540 RNPC3Q96LT9 517 aaKnown RBP14.28□□□□□ -0.12
LINC00544-201ENST00000400540 TEX13BQ9BXU2 312 aa14.28□□□□□ -0.12
LINC00544-201ENST00000400540 ZHX1Q9UKY1 873 aaPredicted RBP14.28□□□□□ -0.12
LINC00544-201ENST00000400540 CNPY2Q9Y2B0 182 aa14.28□□□□□ -0.12
LINC00544-201ENST00000400540 SYNGAP1Q96PV0 1343 aa14.27□□□□□ -0.12
LINC00544-201ENST00000400540 DNAJC25-GNG10A0A024R161 153 aa14.27□□□□□ -0.13
LINC00544-201ENST00000400540 IGKV6D-41A0A0C4DH26 115 aa14.27□□□□□ -0.13
LINC00544-201ENST00000400540 PRDM1O75626 825 aa14.27□□□□□ -0.13
LINC00544-201ENST00000400540 RAG1P15918 1043 aa14.27□□□□□ -0.13
LINC00544-201ENST00000400540 FAAP100Q0VG06 881 aa14.27□□□□□ -0.13
LINC00544-201ENST00000400540 CPXCR1Q8N123 301 aa14.27□□□□□ -0.13
LINC00544-201ENST00000400540 FGD4Q96M96 766 aa14.27□□□□□ -0.13
LINC00544-201ENST00000400540 MKNK2Q9HBH9 465 aa14.27□□□□□ -0.13
LINC00544-201ENST00000400540 RAVER2Q9HCJ3 691 aaKnown RBP14.27□□□□□ -0.13
LINC00544-201ENST00000400540 STARD7Q9NQZ5 370 aa14.27□□□□□ -0.13
LINC00544-201ENST00000400540 ECHDC1Q9NTX5 307 aa14.27□□□□□ -0.13
LINC00544-201ENST00000400540 TMEM39AQ9NV64 488 aa14.27□□□□□ -0.13
LINC00544-201ENST00000400540 NYAP2Q9P242 653 aa14.27□□□□□ -0.13
LINC00544-201ENST00000400540 CLIP2Q9UDT6 1046 aa14.27□□□□□ -0.13
LINC00544-201ENST00000400540 CHD7Q9P2D1 2997 aa14.27□□□□□ -0.13
LINC00544-201ENST00000400540 M0R2C6 588 aa14.26□□□□□ -0.13
LINC00544-201ENST00000400540 FOSL2P15408 326 aa14.26□□□□□ -0.13
LINC00544-201ENST00000400540 FPGSQ05932 587 aa14.26□□□□□ -0.13
LINC00544-201ENST00000400540 KCNA10Q16322 511 aa14.26□□□□□ -0.13
LINC00544-201ENST00000400540 DIEXFQ68CQ4 756 aaKnown RBP14.26□□□□□ -0.13
LINC00544-201ENST00000400540 CCSAPQ6IQ19 270 aaPredicted RBP14.26□□□□□ -0.13
LINC00544-201ENST00000400540 MAMDC4Q6UXC1 1216 aa14.26□□□□□ -0.13
LINC00544-201ENST00000400540 ANKRD33Q7Z3H0 272 aa14.26□□□□□ -0.13
LINC00544-201ENST00000400540 LRRC47Q8N1G4 583 aaKnown RBP14.26□□□□□ -0.13
LINC00544-201ENST00000400540 KBTBD3Q8NAB2 608 aa14.26□□□□□ -0.13
LINC00544-201ENST00000400540 KLHDC9Q8NEP7 349 aa14.26□□□□□ -0.13
LINC00544-201ENST00000400540 APPBP2Q92624 585 aa14.26□□□□□ -0.13
LINC00544-201ENST00000400540 KIFC2Q96AC6 838 aa14.26□□□□□ -0.13
LINC00544-201ENST00000400540 DDX11Q96FC9 970 aa14.26□□□□□ -0.13
LINC00544-201ENST00000400540 CEP95Q96GE4 821 aa14.26□□□□□ -0.13
LINC00544-201ENST00000400540 TSEN34Q9BSV6 310 aaKnown RBP14.26□□□□□ -0.13
LINC00544-201ENST00000400540 GPAA1O43292 621 aa14.25□□□□□ -0.13
LINC00544-201ENST00000400540 MSL3Q8N5Y2 521 aaKnown RBP14.25□□□□□ -0.13
LINC00544-201ENST00000400540 PRPF38AQ8NAV1 312 aaKnown RBP14.25□□□□□ -0.13
LINC00544-201ENST00000400540 SLC38A10Q9HBR0 1119 aa14.25□□□□□ -0.13
LINC00544-201ENST00000400540 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.25□□□□□ -0.13
LINC00544-201ENST00000400540 RCAN3Q9UKA8 241 aa14.25□□□□□ -0.13
LINC00544-201ENST00000400540 FAM184BQ9ULE4 1060 aa14.25□□□□□ -0.13
LINC00544-201ENST00000400540 XIRP2A4UGR9 3374 aa14.25□□□□□ -0.13
LINC00544-201ENST00000400540 MOXD2PA6NHM9 499 aa14.24□□□□□ -0.13
LINC00544-201ENST00000400540 RNF113AO15541 343 aaKnown RBP14.24□□□□□ -0.13
LINC00544-201ENST00000400540 C6orf222P0C671 652 aaPredicted RBP14.24□□□□□ -0.13
LINC00544-201ENST00000400540 TDO2P48775 406 aa14.24□□□□□ -0.13
LINC00544-201ENST00000400540 ACVR2BQ13705 512 aa14.24□□□□□ -0.13
LINC00544-201ENST00000400540 GIMAP6Q6P9H5 292 aa14.24□□□□□ -0.13
LINC00544-201ENST00000400540 NUP133Q8WUM0 1156 aa14.24□□□□□ -0.13
LINC00544-201ENST00000400540 CHMP4CQ96CF2 233 aa14.24□□□□□ -0.13
LINC00544-201ENST00000400540 TOX2Q96NM4 488 aa14.24□□□□□ -0.13
LINC00544-201ENST00000400540 TBX21Q9UL17 535 aa14.24□□□□□ -0.13
LINC00544-201ENST00000400540 PLIN4Q96Q06 1357 aa14.23□□□□□ -0.13
LINC00544-201ENST00000400540 DCDC2CA8MYV0 355 aa14.23□□□□□ -0.13
LINC00544-201ENST00000400540 ATP2A1O14983 1001 aa14.23□□□□□ -0.13
LINC00544-201ENST00000400540 ZBED4O75132 1171 aa14.23□□□□□ -0.13
LINC00544-201ENST00000400540 DUSP11O75319 330 aaKnown RBP14.23□□□□□ -0.13
LINC00544-201ENST00000400540 ASGR1P07306 291 aa14.23□□□□□ -0.13
LINC00544-201ENST00000400540 DNAJB2P25686 324 aa14.23□□□□□ -0.13
LINC00544-201ENST00000400540 CST5P28325 142 aaPredicted RBP14.23□□□□□ -0.13
LINC00544-201ENST00000400540 GRIN2CQ14957 1233 aa14.23□□□□□ -0.13
LINC00544-201ENST00000400540 CCDC144BQ3MJ40 725 aa14.23□□□□□ -0.13
LINC00544-201ENST00000400540 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.23□□□□□ -0.13
LINC00544-201ENST00000400540 ARMCX2Q7L311 632 aa14.23□□□□□ -0.13
LINC00544-201ENST00000400540 ZNF467Q7Z7K2 595 aaPredicted RBP14.23□□□□□ -0.13
LINC00544-201ENST00000400540 ANKRD35Q8N283 1001 aa14.23□□□□□ -0.13
LINC00544-201ENST00000400540 SEC62Q99442 399 aaKnown RBP14.23□□□□□ -0.13
LINC00544-201ENST00000400540 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.23□□□□□ -0.13
LINC00544-201ENST00000400540 KATNBL1Q9H079 304 aa14.23□□□□□ -0.13
LINC00544-201ENST00000400540 CHMP4BQ9H444 224 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms