RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 TMEM132BQ14DG7 1078 aa29.65■■■□□ 2.34
TMEM55B-202ENST00000398020 Q6ZUG5 572 aa29.65■■■□□ 2.34
TMEM55B-202ENST00000398020 RUFY3Q7L099 469 aa29.65■■■□□ 2.34
TMEM55B-202ENST00000398020 RAB11FIP4Q86YS3 637 aa29.65■■■□□ 2.34
TMEM55B-202ENST00000398020 ZNF654Q8IZM8 581 aa29.65■■■□□ 2.34
TMEM55B-202ENST00000398020 NUP133Q8WUM0 1156 aa29.65■■■□□ 2.34
TMEM55B-202ENST00000398020 PRR12Q9ULL5 1215 aa29.65■■■□□ 2.34
TMEM55B-202ENST00000398020 PARP1P09874 1014 aaKnown RBP29.64■■■□□ 2.34
TMEM55B-202ENST00000398020 PSMC4P43686 418 aa29.64■■■□□ 2.34
TMEM55B-202ENST00000398020 ANAPC15P60006 121 aa29.64■■■□□ 2.34
TMEM55B-202ENST00000398020 KIF22Q14807 665 aa29.64■■■□□ 2.34
TMEM55B-202ENST00000398020 TMTC2Q8N394 836 aa29.64■■■□□ 2.34
TMEM55B-202ENST00000398020 STAG2Q8N3U4 1231 aa29.64■■■□□ 2.34
TMEM55B-202ENST00000398020 MB21D1Q8N884 522 aa29.64■■■□□ 2.34
TMEM55B-202ENST00000398020 TM6SF1Q9BZW5 370 aa29.64■■■□□ 2.34
TMEM55B-202ENST00000398020 UBA5Q9GZZ9 404 aa29.64■■■□□ 2.34
TMEM55B-202ENST00000398020 CYP46A1Q9Y6A2 500 aa29.64■■■□□ 2.34
TMEM55B-202ENST00000398020 GPATCH4Q5T3I0 446 aaKnown RBP29.63■■■□□ 2.33
TMEM55B-202ENST00000398020 TRIM47Q96LD4 638 aa29.63■■■□□ 2.33
TMEM55B-202ENST00000398020 PORCNQ9H237 461 aa29.63■■■□□ 2.33
TMEM55B-202ENST00000398020 PLA2G6O60733 806 aa29.63■■■□□ 2.33
TMEM55B-202ENST00000398020 RXRAP19793 462 aa29.63■■■□□ 2.33
TMEM55B-202ENST00000398020 ASPRV1Q53RT3 343 aa29.63■■■□□ 2.33
TMEM55B-202ENST00000398020 REPS2Q8NFH8 660 aa29.63■■■□□ 2.33
TMEM55B-202ENST00000398020 FMNL1O95466 1100 aaPredicted RBP29.62■■■□□ 2.33
TMEM55B-202ENST00000398020 SYDE2Q5VT97 1194 aa29.62■■■□□ 2.33
TMEM55B-202ENST00000398020 BTNL9Q6UXG8 535 aa29.62■■■□□ 2.33
TMEM55B-202ENST00000398020 SGMS1Q86VZ5 419 aa29.62■■■□□ 2.33
TMEM55B-202ENST00000398020 BRF1Q92994 677 aa29.62■■■□□ 2.33
TMEM55B-202ENST00000398020 SPATC1LQ9H0A9 340 aa29.62■■■□□ 2.33
TMEM55B-202ENST00000398020 SLC38A10Q9HBR0 1119 aa29.62■■■□□ 2.33
TMEM55B-202ENST00000398020 MAD2L2Q9UI95 211 aa29.62■■■□□ 2.33
TMEM55B-202ENST00000398020 CTDP1Q9Y5B0 961 aaPredicted RBP29.62■■■□□ 2.33
TMEM55B-202ENST00000398020 SLC12A7Q9Y666 1083 aa29.62■■■□□ 2.33
TMEM55B-202ENST00000398020 ZBED4O75132 1171 aa29.61■■■□□ 2.33
TMEM55B-202ENST00000398020 GRM4Q14833 912 aa29.61■■■□□ 2.33
TMEM55B-202ENST00000398020 CCDC144CPQ8IYA2 1237 aa29.61■■■□□ 2.33
TMEM55B-202ENST00000398020 CPXCR1Q8N123 301 aa29.61■■■□□ 2.33
TMEM55B-202ENST00000398020 C22orf23Q9BZE7 217 aa29.61■■■□□ 2.33
TMEM55B-202ENST00000398020 EFCC1Q9HA90 598 aa29.61■■■□□ 2.33
TMEM55B-202ENST00000398020 ZNF214Q9UL59 606 aaPredicted RBP29.61■■■□□ 2.33
TMEM55B-202ENST00000398020 BRPF3Q9ULD4 1205 aa29.61■■■□□ 2.33
TMEM55B-202ENST00000398020 MGAMO43451 1857 aa29.61■■■□□ 2.33
TMEM55B-202ENST00000398020 SLC4A3P48751 1232 aa29.6■■■□□ 2.33
TMEM55B-202ENST00000398020 MOV10L1Q9BXT6 1211 aaKnown RBP29.6■■■□□ 2.33
TMEM55B-202ENST00000398020 RAVER2Q9HCJ3 691 aaKnown RBP29.6■■■□□ 2.33
TMEM55B-202ENST00000398020 TRIM17Q9Y577 477 aa29.6■■■□□ 2.33
TMEM55B-202ENST00000398020 DDAH1O94760 285 aa29.6■■■□□ 2.33
TMEM55B-202ENST00000398020 FCGRTP55899 365 aa29.6■■■□□ 2.33
TMEM55B-202ENST00000398020 WDR78Q5VTH9 848 aa29.6■■■□□ 2.33
TMEM55B-202ENST00000398020 MICU3Q86XE3 530 aa29.6■■■□□ 2.33
TMEM55B-202ENST00000398020 CCAR1Q8IX12 1150 aaKnown RBP29.6■■■□□ 2.33
TMEM55B-202ENST00000398020 PALM3A6NDB9 673 aaPredicted RBP29.59■■■□□ 2.33
TMEM55B-202ENST00000398020 KLRF2D3W0D1 207 aa29.59■■■□□ 2.33
TMEM55B-202ENST00000398020 TNPO2O14787 897 aaKnown RBP29.59■■■□□ 2.33
TMEM55B-202ENST00000398020 CCNA1P78396 465 aa29.59■■■□□ 2.33
TMEM55B-202ENST00000398020 APOBRQ0VD83 1088 aa29.59■■■□□ 2.33
TMEM55B-202ENST00000398020 CCDC174Q6PII3 467 aa29.59■■■□□ 2.33
TMEM55B-202ENST00000398020 APOA5Q6Q788 366 aa29.59■■■□□ 2.33
TMEM55B-202ENST00000398020 BACH2Q9BYV9 841 aa29.59■■■□□ 2.33
TMEM55B-202ENST00000398020 NAP1L2Q9ULW6 460 aaPredicted RBP29.59■■■□□ 2.33
TMEM55B-202ENST00000398020 HTTP42858 3142 aa29.58■■■□□ 2.33
TMEM55B-202ENST00000398020 KLF18A0A0U1RQI7 1052 aa29.58■■■□□ 2.33
TMEM55B-202ENST00000398020 OTOP1Q7RTM1 612 aa29.58■■■□□ 2.33
TMEM55B-202ENST00000398020 DHX16O60231 1041 aaKnown RBP29.57■■■□□ 2.32
TMEM55B-202ENST00000398020 STAT3P40763 770 aa29.57■■■□□ 2.32
TMEM55B-202ENST00000398020 COL13A1Q5TAT6 717 aaPredicted RBP29.57■■■□□ 2.32
TMEM55B-202ENST00000398020 SNRNP48Q6IEG0 339 aaKnown RBP29.57■■■□□ 2.32
TMEM55B-202ENST00000398020 CTCFLQ8NI51 663 aaPredicted RBP29.57■■■□□ 2.32
TMEM55B-202ENST00000398020 UPF2Q9HAU5 1272 aaKnown RBP29.57■■■□□ 2.32
TMEM55B-202ENST00000398020 VAT1LQ9HCJ6 419 aa29.57■■■□□ 2.32
TMEM55B-202ENST00000398020 PDRG1Q9NUG6 133 aa29.57■■■□□ 2.32
TMEM55B-202ENST00000398020 SYNE3Q6ZMZ3 975 aa29.56■■■□□ 2.32
TMEM55B-202ENST00000398020 CTU1Q7Z7A3 348 aaKnown RBP29.56■■■□□ 2.32
TMEM55B-202ENST00000398020 ADGRF4Q8IZF3 695 aa29.56■■■□□ 2.32
TMEM55B-202ENST00000398020 IL17RAQ96F46 866 aa29.56■■■□□ 2.32
TMEM55B-202ENST00000398020 LARP6Q9BRS8 491 aaKnown RBP29.56■■■□□ 2.32
TMEM55B-202ENST00000398020 TEX13BQ9BXU2 312 aa29.56■■■□□ 2.32
TMEM55B-202ENST00000398020 ERCC3P19447 782 aa29.56■■■□□ 2.32
TMEM55B-202ENST00000398020 TOB2Q14106 344 aaPredicted RBP29.56■■■□□ 2.32
TMEM55B-202ENST00000398020 NCAPG2Q86XI2 1143 aa29.56■■■□□ 2.32
TMEM55B-202ENST00000398020 AGBL1Q96MI9 1066 aa29.56■■■□□ 2.32
TMEM55B-202ENST00000398020 AGXT2Q9BYV1 514 aa29.56■■■□□ 2.32
TMEM55B-202ENST00000398020 RANBP17Q9H2T7 1088 aaKnown RBP29.56■■■□□ 2.32
TMEM55B-202ENST00000398020 CWC22Q9HCG8 908 aaKnown RBP29.56■■■□□ 2.32
TMEM55B-202ENST00000398020 ZNF536O15090 1300 aa29.56■■■□□ 2.32
TMEM55B-202ENST00000398020 FDX1P10109 184 aa29.55■■■□□ 2.32
TMEM55B-202ENST00000398020 TAL1P17542 331 aaPredicted RBP29.55■■■□□ 2.32
TMEM55B-202ENST00000398020 MAPK4P31152 587 aa29.55■■■□□ 2.32
TMEM55B-202ENST00000398020 NBPF11Q86T75 865 aa29.55■■■□□ 2.32
TMEM55B-202ENST00000398020 RIPK3Q9Y572 518 aa29.55■■■□□ 2.32
TMEM55B-202ENST00000398020 DOCK3Q8IZD9 2030 aa29.54■■■□□ 2.32
TMEM55B-202ENST00000398020 ZBTB43O43298 467 aa29.54■■■□□ 2.32
TMEM55B-202ENST00000398020 CALM1P0DP23 149 aa29.54■■■□□ 2.32
TMEM55B-202ENST00000398020 CALM2P0DP24 149 aa29.54■■■□□ 2.32
TMEM55B-202ENST00000398020 CALM3P0DP25 149 aa29.54■■■□□ 2.32
TMEM55B-202ENST00000398020 ARHGEF6Q15052 776 aa29.54■■■□□ 2.32
TMEM55B-202ENST00000398020 SLC35G1Q2M3R5 365 aa29.54■■■□□ 2.32
TMEM55B-202ENST00000398020 GPR142Q7Z601 462 aa29.54■■■□□ 2.32
TMEM55B-202ENST00000398020 FBXL16Q8N461 479 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms