RNA–Protein interactions for RNA: ENST00000397961.6

PFKL-202, Transcript of phosphofructokinase, liver type, humanhuman

TSL 1 (best)

Gene PFKL, Length 3,390 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKL-202ENST00000397961 NELFCDQ8IXH7 590 aa16.68■□□□□ 0.26
PFKL-202ENST00000397961 ENOX1Q8TC92 643 aaKnown RBP16.68■□□□□ 0.26
PFKL-202ENST00000397961 ZNF512BQ96KM6 892 aaPredicted RBP16.68■□□□□ 0.26
PFKL-202ENST00000397961 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.68■□□□□ 0.268e-7■■■■■ 120.1
PFKL-202ENST00000397961 DDX41Q9UJV9 622 aaKnown RBP16.68■□□□□ 0.26
PFKL-202ENST00000397961 SIPA1L3O60292 1781 aaPredicted RBP16.68■□□□□ 0.26
PFKL-202ENST00000397961 USP17L5A8MUK1 530 aa16.68■□□□□ 0.26
PFKL-202ENST00000397961 SHROOM1Q2M3G4 852 aaPredicted RBP16.68■□□□□ 0.26
PFKL-202ENST00000397961 KANK3Q6NY19 840 aa16.68■□□□□ 0.26
PFKL-202ENST00000397961 GSPT2Q8IYD1 628 aaKnown RBP16.68■□□□□ 0.26
PFKL-202ENST00000397961 CSGALNACT2Q8N6G5 542 aa16.68■□□□□ 0.26
PFKL-202ENST00000397961 RGS22Q8NE09 1264 aa16.68■□□□□ 0.26
PFKL-202ENST00000397961 BAG3O95817 575 aa16.67■□□□□ 0.26
PFKL-202ENST00000397961 CXCR5P32302 372 aa16.67■□□□□ 0.26
PFKL-202ENST00000397961 SMCR8Q8TEV9 937 aaPredicted RBP16.67■□□□□ 0.26
PFKL-202ENST00000397961 SMARCC1Q92922 1105 aaPredicted RBP16.67■□□□□ 0.26
PFKL-202ENST00000397961 PARP3Q9Y6F1 533 aa16.67■□□□□ 0.26
PFKL-202ENST00000397961 PSDA5PKW4 1024 aaPredicted RBP16.67■□□□□ 0.26
PFKL-202ENST00000397961 CCDC155Q8N6L0 562 aa16.67■□□□□ 0.26
PFKL-202ENST00000397961 JADE2Q9NQC1 790 aa16.67■□□□□ 0.26
PFKL-202ENST00000397961 TCP11L1Q9NUJ3 509 aa16.67■□□□□ 0.26
PFKL-202ENST00000397961 COL1A1P02452 1464 aaPredicted RBP16.66■□□□□ 0.26
PFKL-202ENST00000397961 KIF2AO00139 706 aaPredicted RBP16.66■□□□□ 0.26
PFKL-202ENST00000397961 CYTH3O43739 400 aa16.66■□□□□ 0.26
PFKL-202ENST00000397961 TXNRD1Q16881 649 aa16.66■□□□□ 0.26
PFKL-202ENST00000397961 KRT26Q7Z3Y9 468 aa16.66■□□□□ 0.26
PFKL-202ENST00000397961 DNAAF5Q86Y56 855 aa16.66■□□□□ 0.26
PFKL-202ENST00000397961 CEP95Q96GE4 821 aa16.66■□□□□ 0.26
PFKL-202ENST00000397961 USP21Q9UK80 565 aa16.66■□□□□ 0.26
PFKL-202ENST00000397961 NWD2Q9ULI1 1742 aa16.66■□□□□ 0.26
PFKL-202ENST00000397961 PHRF1Q9P1Y6 1649 aaKnown RBP16.66■□□□□ 0.26
PFKL-202ENST00000397961 GYPCP04921 128 aa16.66■□□□□ 0.26
PFKL-202ENST00000397961 PLCG1P19174 1290 aa16.66■□□□□ 0.26
PFKL-202ENST00000397961 FBXL16Q8N461 479 aa16.66■□□□□ 0.26
PFKL-202ENST00000397961 BPIFA3Q9BQP9 254 aa16.66■□□□□ 0.26
PFKL-202ENST00000397961 PARD6BQ9BYG5 372 aa16.66■□□□□ 0.26
PFKL-202ENST00000397961 DEF6Q9H4E7 631 aa16.66■□□□□ 0.26
PFKL-202ENST00000397961 RBM28Q9NW13 759 aaKnown RBP16.66■□□□□ 0.26
PFKL-202ENST00000397961 DUSP10Q9Y6W6 482 aa16.66■□□□□ 0.26
PFKL-202ENST00000397961 DPP8Q6V1X1 898 aaPredicted RBP16.66■□□□□ 0.26
PFKL-202ENST00000397961 NLRC4Q9NPP4 1024 aa16.66■□□□□ 0.26
PFKL-202ENST00000397961 PPP1R3GB7ZBB8 358 aa16.65■□□□□ 0.26
PFKL-202ENST00000397961 ANKRD65E5RJM6 399 aa16.65■□□□□ 0.26
PFKL-202ENST00000397961 COPB1P53618 953 aaKnown RBP16.65■□□□□ 0.26
PFKL-202ENST00000397961 TTBK2Q6IQ55 1244 aa16.65■□□□□ 0.26
PFKL-202ENST00000397961 RCSD1Q6JBY9 416 aa16.65■□□□□ 0.26
PFKL-202ENST00000397961 TBCKQ8TEA7 893 aa16.65■□□□□ 0.26
PFKL-202ENST00000397961 AGPAT5Q9NUQ2 364 aa16.65■□□□□ 0.26
PFKL-202ENST00000397961 PCDHAC2Q9Y5I4 1007 aa16.65■□□□□ 0.26
PFKL-202ENST00000397961 WDR19Q8NEZ3 1342 aa16.65■□□□□ 0.26
PFKL-202ENST00000397961 MYO1BO43795 1136 aa16.65■□□□□ 0.26
PFKL-202ENST00000397961 TBC1D8BQ0IIM8 1120 aa16.65■□□□□ 0.26
PFKL-202ENST00000397961 USH1GQ495M9 461 aa16.65■□□□□ 0.26
PFKL-202ENST00000397961 KIAA0825Q8IV33 1275 aa16.65■□□□□ 0.26
PFKL-202ENST00000397961 SMARCAL1Q9NZC9 954 aa16.65■□□□□ 0.26
PFKL-202ENST00000397961 COL18A1P39060 1754 aa16.65■□□□□ 0.26
PFKL-202ENST00000397961 IPO7O95373 1038 aaKnown RBP16.64■□□□□ 0.26
PFKL-202ENST00000397961 PARP1P09874 1014 aaKnown RBP16.64■□□□□ 0.26
PFKL-202ENST00000397961 PNMA6AP0CW24 399 aaPredicted RBP16.64■□□□□ 0.26
PFKL-202ENST00000397961 CHMP4BP1P59074 171 aa16.64■□□□□ 0.26
PFKL-202ENST00000397961 GPSM2P81274 684 aa16.64■□□□□ 0.26
PFKL-202ENST00000397961 DMTNQ08495 405 aa16.64■□□□□ 0.26
PFKL-202ENST00000397961 ZYXQ15942 572 aaKnown RBP16.64■□□□□ 0.26
PFKL-202ENST00000397961 CCDC122Q5T0U0 273 aa16.64■□□□□ 0.26
PFKL-202ENST00000397961 SPTY2D1Q68D10 685 aaPredicted RBP16.64■□□□□ 0.26
PFKL-202ENST00000397961 POTEDQ86YR6 584 aa16.64■□□□□ 0.26
PFKL-202ENST00000397961 EXOC1Q9NV70 894 aa16.64■□□□□ 0.26
PFKL-202ENST00000397961 KIF1AQ12756 1690 aa16.64■□□□□ 0.26
PFKL-202ENST00000397961 STK36Q9NRP7 1315 aa16.64■□□□□ 0.25
PFKL-202ENST00000397961 NR1I3Q14994 352 aa16.64■□□□□ 0.25
PFKL-202ENST00000397961 TBC1D10BQ4KMP7 808 aaPredicted RBP16.64■□□□□ 0.25
PFKL-202ENST00000397961 CABP7Q86V35 215 aa16.64■□□□□ 0.25
PFKL-202ENST00000397961 SPICE1Q8N0Z3 855 aa16.64■□□□□ 0.25
PFKL-202ENST00000397961 TTC26A0AVF1 554 aa16.64■□□□□ 0.25
PFKL-202ENST00000397961 CCP110O43303 1012 aa16.64■□□□□ 0.25
PFKL-202ENST00000397961 TDP2O95551 362 aa16.64■□□□□ 0.25
PFKL-202ENST00000397961 KRT18P05783 430 aaKnown RBP16.64■□□□□ 0.25
PFKL-202ENST00000397961 CALM1P0DP23 149 aa16.64■□□□□ 0.25
PFKL-202ENST00000397961 CALM2P0DP24 149 aa16.64■□□□□ 0.25
PFKL-202ENST00000397961 CALM3P0DP25 149 aa16.64■□□□□ 0.25
PFKL-202ENST00000397961 LMAN1P49257 510 aa16.64■□□□□ 0.25
PFKL-202ENST00000397961 APBA1Q02410 837 aa16.64■□□□□ 0.25
PFKL-202ENST00000397961 FUT2Q10981 343 aa16.64■□□□□ 0.25
PFKL-202ENST00000397961 PFKFB3Q16875 520 aaPredicted RBP16.64■□□□□ 0.25
PFKL-202ENST00000397961 DNAJC21Q5F1R6 531 aaKnown RBP16.64■□□□□ 0.25
PFKL-202ENST00000397961 GLIS3Q8NEA6 775 aa16.64■□□□□ 0.25
PFKL-202ENST00000397961 DBNDD1Q9H9R9 158 aa16.64■□□□□ 0.25
PFKL-202ENST00000397961 TRIM37O94972 964 aa16.63■□□□□ 0.25
PFKL-202ENST00000397961 BMS1Q14692 1282 aaKnown RBP16.63■□□□□ 0.25
PFKL-202ENST00000397961 SYCP1Q15431 976 aa16.63■□□□□ 0.25
PFKL-202ENST00000397961 TDRD12Q587J7 1177 aaKnown RBP16.63■□□□□ 0.25
PFKL-202ENST00000397961 FERMT2Q96AC1 680 aa16.63■□□□□ 0.25
PFKL-202ENST00000397961 BRIP1Q9BX63 1249 aa16.63■□□□□ 0.25
PFKL-202ENST00000397961 PRDM4Q9UKN5 801 aa16.63■□□□□ 0.25
PFKL-202ENST00000397961 N4BP2Q86UW6 1770 aaPredicted RBP16.63■□□□□ 0.25
PFKL-202ENST00000397961 STX10O60499 249 aa16.63■□□□□ 0.25
PFKL-202ENST00000397961 STK4Q13043 487 aa16.63■□□□□ 0.25
PFKL-202ENST00000397961 NPY5RQ15761 445 aa16.63■□□□□ 0.25
PFKL-202ENST00000397961 FBXO33Q7Z6M2 555 aa16.63■□□□□ 0.25
PFKL-202ENST00000397961 ARPP21Q9UBL0 812 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms