RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.65□□□□□ -1.35
PTPRD-206ENST00000397617 GUF1Q8N442 669 aaKnown RBP6.65□□□□□ -1.35
PTPRD-206ENST00000397617 CHURC1Q8WUH1 139 aa6.65□□□□□ -1.35
PTPRD-206ENST00000397617 AMNQ9BXJ7 453 aa6.65□□□□□ -1.35
PTPRD-206ENST00000397617 RIC8AQ9NPQ8 531 aa6.65□□□□□ -1.35
PTPRD-206ENST00000397617 SEL1LQ9UBV2 794 aa6.65□□□□□ -1.35
PTPRD-206ENST00000397617 PNMA6FA0A0J9YX94 578 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 KLRF2D3W0D1 207 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 C6orf229H3BNL8 230 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 DYNC1I1O14576 645 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 LIG1P18858 919 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 ZNF75DP51815 510 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 OAZ1P54368 228 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 ALCAMQ13740 583 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 CDC37Q16543 378 aaPredicted RBP6.64□□□□□ -1.35
PTPRD-206ENST00000397617 HAUS3Q68CZ6 603 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 RDM1Q8NG50 284 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 BMP2KQ9NSY1 1161 aaPredicted RBP6.64□□□□□ -1.35
PTPRD-206ENST00000397617 MINDY4BA8MYZ0 360 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 ZSCAN12O43309 604 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 NEK8Q86SG6 692 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 CNNM3Q8NE01 707 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 PHLPP2Q6ZVD8 1323 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 PSMA7O14818 248 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 POLR3DP05423 398 aaPredicted RBP6.64□□□□□ -1.35
PTPRD-206ENST00000397617 CYP3A4P08684 503 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 TNIP1Q15025 636 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 SPATA1Q5VX52 437 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 KRT26Q7Z3Y9 468 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 JARID2Q92833 1246 aaPredicted RBP6.64□□□□□ -1.35
PTPRD-206ENST00000397617 MCCD1P59942 119 aaPredicted RBP6.64□□□□□ -1.35
PTPRD-206ENST00000397617 LRRC63Q05C16 580 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 EDRF1Q3B7T1 1238 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 FILIP1LQ4L180 1135 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 CNKSR2Q8WXI2 1034 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 HOXC6P09630 235 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 CDC27P30260 824 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 CDK8P49336 464 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 CCT2P78371 535 aaKnown RBP6.64□□□□□ -1.35
PTPRD-206ENST00000397617 DTHD1Q6ZMT9 781 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 KCNQ5Q9NR82 932 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 ARFGEF1Q9Y6D6 1849 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 BTDP43251 543 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 MSL3Q8N5Y2 521 aaKnown RBP6.64□□□□□ -1.35
PTPRD-206ENST00000397617 EHBP1Q8NDI1 1231 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 NUP58Q9BVL2 599 aa6.64□□□□□ -1.35
PTPRD-206ENST00000397617 NR1I2O75469 434 aa6.63□□□□□ -1.35
PTPRD-206ENST00000397617 POSTNQ15063 836 aa6.63□□□□□ -1.35
PTPRD-206ENST00000397617 DCAF15Q66K64 600 aa6.63□□□□□ -1.35
PTPRD-206ENST00000397617 SLFN12Q8IYM2 578 aa6.63□□□□□ -1.35
PTPRD-206ENST00000397617 RPGRIP1Q96KN7 1286 aa6.63□□□□□ -1.35
PTPRD-206ENST00000397617 SLFNL1Q499Z3 407 aa6.63□□□□□ -1.35
PTPRD-206ENST00000397617 CDKAL1Q5VV42 579 aa6.63□□□□□ -1.35
PTPRD-206ENST00000397617 DRC7Q8IY82 874 aa6.63□□□□□ -1.35
PTPRD-206ENST00000397617 C12orf42Q96LP6 360 aa6.63□□□□□ -1.35
PTPRD-206ENST00000397617 NCOA5Q9HCD5 579 aaKnown RBP6.63□□□□□ -1.35
PTPRD-206ENST00000397617 CABP5Q9NP86 173 aa6.63□□□□□ -1.35
PTPRD-206ENST00000397617 LUC7LQ9NQ29 371 aaKnown RBP6.63□□□□□ -1.35
PTPRD-206ENST00000397617 TOMM22Q9NS69 142 aa6.63□□□□□ -1.35
PTPRD-206ENST00000397617 RHOBTB3O94955 611 aa6.63□□□□□ -1.35
PTPRD-206ENST00000397617 PTMAP06454 111 aaKnown RBP6.63□□□□□ -1.35
PTPRD-206ENST00000397617 APOBEC3HQ6NTF7 200 aaKnown RBP6.63□□□□□ -1.35
PTPRD-206ENST00000397617 ZBED3Q96IU2 234 aaPredicted RBP6.63□□□□□ -1.35
PTPRD-206ENST00000397617 CCDC85AQ96PX6 553 aaPredicted RBP6.63□□□□□ -1.35
PTPRD-206ENST00000397617 TRIM5Q9C035 493 aa6.63□□□□□ -1.35
PTPRD-206ENST00000397617 TBC1D7Q9P0N9 293 aa6.63□□□□□ -1.35
PTPRD-206ENST00000397617 ZNRF3Q9ULT6 936 aa6.63□□□□□ -1.35
PTPRD-206ENST00000397617 PCDHA5Q9Y5H7 936 aa6.63□□□□□ -1.35
PTPRD-206ENST00000397617 ZBTB5O15062 677 aa6.63□□□□□ -1.35
PTPRD-206ENST00000397617 DKC1O60832 514 aaKnown RBP eCLIP6.63□□□□□ -1.35
PTPRD-206ENST00000397617 ADCY5O95622 1261 aa6.63□□□□□ -1.35
PTPRD-206ENST00000397617 E2F4Q16254 413 aa6.63□□□□□ -1.35
PTPRD-206ENST00000397617 SPRYD3Q8NCJ5 442 aa6.63□□□□□ -1.35
PTPRD-206ENST00000397617 FBXO41Q8TF61 875 aa6.63□□□□□ -1.35
PTPRD-206ENST00000397617 IWS1Q96ST2 819 aa6.63□□□□□ -1.35
PTPRD-206ENST00000397617 MYH4Q9Y623 1939 aa6.63□□□□□ -1.35
PTPRD-206ENST00000397617 GADD45BO75293 160 aaPredicted RBP6.63□□□□□ -1.35
PTPRD-206ENST00000397617 LYPLA2O95372 231 aa6.63□□□□□ -1.35
PTPRD-206ENST00000397617 GNA14O95837 355 aa6.63□□□□□ -1.35
PTPRD-206ENST00000397617 FBXL5Q9UKA1 691 aa6.63□□□□□ -1.35
PTPRD-206ENST00000397617 STX8Q9UNK0 236 aa6.63□□□□□ -1.35
PTPRD-206ENST00000397617 HNRNPH3P31942 346 aaKnown RBP6.63□□□□□ -1.35
PTPRD-206ENST00000397617 ARHGEF10LQ9HCE6 1279 aa6.63□□□□□ -1.35
PTPRD-206ENST00000397617 C3orf67Q6ZVT6 689 aa6.63□□□□□ -1.35
PTPRD-206ENST00000397617 GZF1Q9H116 711 aaPredicted RBP6.63□□□□□ -1.35
PTPRD-206ENST00000397617 SCN9AQ15858 1988 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 OR52Z1P0C646 297 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 RASA3Q14644 834 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 C7orf25Q9BPX7 421 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 TANGO6Q9C0B7 1094 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 V9GY48 417 aaPredicted RBP6.62□□□□□ -1.35
PTPRD-206ENST00000397617 UBE4BO95155 1302 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 GFPT2O94808 682 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 CRYGNQ8WXF5 182 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 SMARCE1Q969G3 411 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 CBX8Q9HC52 389 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 NAP1L2Q9ULW6 460 aaPredicted RBP6.62□□□□□ -1.35
PTPRD-206ENST00000397617 CAPN15O75808 1086 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 VIL1P09327 827 aaKnown RBP6.62□□□□□ -1.35
PTPRD-206ENST00000397617 GOLGA5Q8TBA6 731 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms